RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 MGAQ8IWI9 3026 aa15.61■□□□□ 0.09
VRK3-221ENST00000600284 KMOO15229 486 aa15.61■□□□□ 0.09
VRK3-221ENST00000600284 EFSO43281 561 aa15.61■□□□□ 0.09
VRK3-221ENST00000600284 DUX1O43812 170 aa15.61■□□□□ 0.09
VRK3-221ENST00000600284 C1QL1O75973 258 aa15.61■□□□□ 0.09
VRK3-221ENST00000600284 PRB1P04280 392 aa15.61■□□□□ 0.09
VRK3-221ENST00000600284 FGF3P11487 239 aaPredicted RBP15.61■□□□□ 0.09
VRK3-221ENST00000600284 CCL4P13236 92 aa15.61■□□□□ 0.09
VRK3-221ENST00000600284 NFKB1P19838 968 aa15.61■□□□□ 0.09
VRK3-221ENST00000600284 WNT3AP56704 352 aa15.61■□□□□ 0.09
VRK3-221ENST00000600284 XRCC4Q13426 336 aa15.61■□□□□ 0.09
VRK3-221ENST00000600284 FAM182AQ5T1J6 154 aa15.61■□□□□ 0.09
VRK3-221ENST00000600284 ALS2CLQ60I27 953 aa15.61■□□□□ 0.09
VRK3-221ENST00000600284 KDELC1Q6UW63 502 aa15.61■□□□□ 0.09
VRK3-221ENST00000600284 BBS12Q6ZW61 710 aa15.61■□□□□ 0.09
VRK3-221ENST00000600284 PID1Q7Z2X4 250 aa15.61■□□□□ 0.09
VRK3-221ENST00000600284 DAAM2Q86T65 1068 aa15.61■□□□□ 0.09
VRK3-221ENST00000600284 ZC3H18Q86VM9 953 aaKnown RBP15.61■□□□□ 0.09
VRK3-221ENST00000600284 CCDC50Q8IVM0 306 aa15.61■□□□□ 0.09
VRK3-221ENST00000600284 HTR3CQ8WXA8 447 aa15.61■□□□□ 0.09
VRK3-221ENST00000600284 MRFAP1L1Q96HT8 127 aa15.61■□□□□ 0.09
VRK3-221ENST00000600284 GOLPH3Q9H4A6 298 aa15.61■□□□□ 0.09
VRK3-221ENST00000600284 UCK1Q9HA47 277 aa15.61■□□□□ 0.09
VRK3-221ENST00000600284 UBP1Q9NZI7 540 aa15.61■□□□□ 0.09
VRK3-221ENST00000600284 HACD3Q9P035 362 aa15.61■□□□□ 0.09
VRK3-221ENST00000600284 FOXJ2Q9P0K8 574 aa15.61■□□□□ 0.09
VRK3-221ENST00000600284 KLHL8Q9P2G9 620 aaPredicted RBP15.61■□□□□ 0.09
VRK3-221ENST00000600284 EFR3BQ9Y2G0 817 aa15.61■□□□□ 0.09
VRK3-221ENST00000600284 EPN1Q9Y6I3 576 aaPredicted RBP15.61■□□□□ 0.09
VRK3-221ENST00000600284 B4E171 279 aa15.6■□□□□ 0.09
VRK3-221ENST00000600284 APOC4-APOC2K7ER74 178 aa15.6■□□□□ 0.09
VRK3-221ENST00000600284 APOC2P02655 101 aa15.6■□□□□ 0.09
VRK3-221ENST00000600284 XRCC1P18887 633 aaPredicted RBP15.6■□□□□ 0.09
VRK3-221ENST00000600284 FECHP22830 423 aa15.6■□□□□ 0.09
VRK3-221ENST00000600284 CSF2RBP32927 897 aa15.6■□□□□ 0.09
VRK3-221ENST00000600284 TSPAN7P41732 249 aa15.6■□□□□ 0.09
VRK3-221ENST00000600284 MPP3Q13368 585 aa15.6■□□□□ 0.09
VRK3-221ENST00000600284 TGIF1Q15583 401 aa15.6■□□□□ 0.09
VRK3-221ENST00000600284 XKR5Q6UX68 686 aa15.6■□□□□ 0.09
VRK3-221ENST00000600284 LRRTM4Q86VH4 590 aa15.6■□□□□ 0.09
VRK3-221ENST00000600284 ZFAND4Q86XD8 727 aa15.6■□□□□ 0.09
VRK3-221ENST00000600284 TMTC1Q8IUR5 882 aa15.6■□□□□ 0.09
VRK3-221ENST00000600284 ZNF567Q8N184 647 aa15.6■□□□□ 0.09
VRK3-221ENST00000600284 BRSK1Q8TDC3 778 aa15.6■□□□□ 0.09
VRK3-221ENST00000600284 QKIQ96PU8 341 aaKnown RBP eCLIP15.6■□□□□ 0.09
VRK3-221ENST00000600284 FERMT1Q9BQL6 677 aa15.6■□□□□ 0.09
VRK3-221ENST00000600284 TIMM29Q9BSF4 260 aa15.6■□□□□ 0.09
VRK3-221ENST00000600284 DDA1Q9BW61 102 aa15.6■□□□□ 0.09
VRK3-221ENST00000600284 ASPSCR1Q9BZE9 553 aa15.6■□□□□ 0.09
VRK3-221ENST00000600284 KLC4Q9NSK0 619 aa15.6■□□□□ 0.09
VRK3-221ENST00000600284 CPNE7Q9UBL6 633 aa15.6■□□□□ 0.09
VRK3-221ENST00000600284 SPO11Q9Y5K1 396 aa15.6■□□□□ 0.09
VRK3-221ENST00000600284 ZFC3H1O60293 1989 aaKnown RBP15.6■□□□□ 0.09
VRK3-221ENST00000600284 BAHCC1Q9P281 2608 aa15.6■□□□□ 0.09
VRK3-221ENST00000600284 AHCTF1Q8WYP5 2266 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 LILRA5A6NI73 299 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 BTNL10A8MVZ5 291 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 STMND1H3BQB6 276 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 AGRPO00253 132 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 AURKAO14965 403 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 SNX2O60749 519 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 KCNJ13O60928 360 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 PPFIA2O75334 1257 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 CDK14O94921 469 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 NDUFA10O95299 355 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 IPO7O95373 1038 aaKnown RBP15.59■□□□□ 0.09
VRK3-221ENST00000600284 SLC4A1P02730 911 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 ZNF7P17097 686 aaPredicted RBP15.59■□□□□ 0.09
VRK3-221ENST00000600284 HLA-DPA1P20036 260 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 CTNNA1P35221 906 aaKnown RBP15.59■□□□□ 0.09
VRK3-221ENST00000600284 RAB15P59190 212 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 NFATC2Q13469 925 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 LLGL1Q15334 1064 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 SLC1A5Q15758 541 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 SIRPB2Q5JXA9 342 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 MANEAQ5SRI9 462 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 ZNF648Q5T619 568 aaPredicted RBP15.59■□□□□ 0.09
VRK3-221ENST00000600284 ARHGAP22Q7Z5H3 698 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 ZNF843Q8N446 348 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 KRT35Q92764 455 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 SGF29Q96ES7 293 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 MRGPRX2Q96LB1 330 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 ARFGAP3Q9NP61 516 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 PRDM8Q9NQV8 689 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 TMEM9Q9P0T7 183 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 PCDHA3Q9Y5H8 950 aa15.59■□□□□ 0.09
VRK3-221ENST00000600284 PRR19A6NJB7 356 aa15.58■□□□□ 0.08
VRK3-221ENST00000600284 MPSTP25325 297 aa15.58■□□□□ 0.08
VRK3-221ENST00000600284 PTPN7P35236 360 aa15.58■□□□□ 0.08
VRK3-221ENST00000600284 MARCKSL1P49006 195 aa15.58■□□□□ 0.08
VRK3-221ENST00000600284 ZNF75DP51815 510 aa15.58■□□□□ 0.08
VRK3-221ENST00000600284 UBE2IP63279 158 aaKnown RBP15.58■□□□□ 0.08
VRK3-221ENST00000600284 TMEM115Q12893 351 aaPredicted RBP15.58■□□□□ 0.08
VRK3-221ENST00000600284 INSCQ1MX18 579 aa15.58■□□□□ 0.08
VRK3-221ENST00000600284 ATP13A5Q4VNC0 1218 aa15.58■□□□□ 0.08
VRK3-221ENST00000600284 DCAF12Q5T6F0 453 aa15.58■□□□□ 0.08
VRK3-221ENST00000600284 ABRAXAS1Q6UWZ7 409 aa15.58■□□□□ 0.08
VRK3-221ENST00000600284 WASH2PQ6VEQ5 465 aa15.58■□□□□ 0.08
VRK3-221ENST00000600284 ZNF761Q86XN6 746 aaPredicted RBP15.58■□□□□ 0.08
VRK3-221ENST00000600284 TTC30BQ8N4P2 665 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms