RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 OR2AG1Q9H205 316 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 FAM96AQ9H5X1 160 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 APOBEC3BQ9UH17 382 aaKnown RBP13.6□□□□□ -0.23
VRK3-219ENST00000600137 PCOLCE2Q9UKZ9 415 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 IGLV3-16A0A075B6K0 115 aa13.59□□□□□ -0.23
VRK3-219ENST00000600137 LY6G6EA0A0G2JKS1 128 aa13.59□□□□□ -0.23
VRK3-219ENST00000600137 PRR19A6NJB7 356 aa13.59□□□□□ -0.23
VRK3-219ENST00000600137 SDR42E2A6NKP2 422 aa13.59□□□□□ -0.23
VRK3-219ENST00000600137 YY2O15391 372 aa13.59□□□□□ -0.23
VRK3-219ENST00000600137 AQP9O43315 295 aa13.59□□□□□ -0.23
VRK3-219ENST00000600137 BANF1O75531 89 aa13.59□□□□□ -0.23
VRK3-219ENST00000600137 ARCN1P48444 511 aaKnown RBP13.59□□□□□ -0.23
VRK3-219ENST00000600137 BLKP51451 505 aa13.59□□□□□ -0.23
VRK3-219ENST00000600137 DRG2P55039 364 aaKnown RBP13.59□□□□□ -0.23
VRK3-219ENST00000600137 LAMB3Q13751 1172 aa13.59□□□□□ -0.23
VRK3-219ENST00000600137 ITGA9Q13797 1035 aa13.59□□□□□ -0.23
VRK3-219ENST00000600137 SEMA3AQ14563 771 aa13.59□□□□□ -0.23
VRK3-219ENST00000600137 GPR33Q49SQ1 333 aa13.59□□□□□ -0.23
VRK3-219ENST00000600137 ARMC3Q5W041 872 aa13.59□□□□□ -0.23
VRK3-219ENST00000600137 PSAPL1Q6NUJ1 521 aa13.59□□□□□ -0.23
VRK3-219ENST00000600137 XKR5Q6UX68 686 aa13.59□□□□□ -0.23
VRK3-219ENST00000600137 RASGEF1AQ8N9B8 481 aa13.59□□□□□ -0.23
VRK3-219ENST00000600137 LMX1AQ8TE12 382 aa13.59□□□□□ -0.23
VRK3-219ENST00000600137 L2HGDHQ9H9P8 463 aa13.59□□□□□ -0.23
VRK3-219ENST00000600137 CARS2Q9HA77 564 aaKnown RBP13.59□□□□□ -0.23
VRK3-219ENST00000600137 TRNAU1APQ9NX07 287 aaKnown RBP13.59□□□□□ -0.23
VRK3-219ENST00000600137 SPASTQ9UBP0 616 aa13.59□□□□□ -0.23
VRK3-219ENST00000600137 SLC23A2Q9UGH3 650 aa13.59□□□□□ -0.23
VRK3-219ENST00000600137 DMGDHQ9UI17 866 aaKnown RBP13.59□□□□□ -0.23
VRK3-219ENST00000600137 PRKAB1Q9Y478 270 aa13.59□□□□□ -0.23
VRK3-219ENST00000600137 U3KQA8 63 aa13.59□□□□□ -0.23
VRK3-219ENST00000600137 COL5A1P20908 1838 aaPredicted RBP13.59□□□□□ -0.23
VRK3-219ENST00000600137 ASXL3Q9C0F0 2248 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 ZCWPW2A0A1B0GU75 182 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 FAM237BA0A1B0GVD1 139 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 ESPNB1AK53 854 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 LMO7DNF2Z398 122 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 FLRT2O43155 660 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 VEGFDO43915 354 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 ASMTLO95671 621 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 GOT2P00505 430 aaKnown RBP13.58□□□□□ -0.24
VRK3-219ENST00000600137 CSRP1P21291 193 aaKnown RBP13.58□□□□□ -0.24
VRK3-219ENST00000600137 GNPDA1P46926 289 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 CTSCP53634 463 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 CTBSQ01459 385 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 SLC7A5Q01650 507 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 DHX9Q08211 1270 aaKnown RBP13.58□□□□□ -0.24
VRK3-219ENST00000600137 SUZ12Q15022 739 aaKnown RBP13.58□□□□□ -0.24
VRK3-219ENST00000600137 ANKRD20A4Q4UJ75 823 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 LDLRAP1Q5SW96 308 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 ZDHHC24Q6UX98 284 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 MARK2Q7KZI7 788 aaKnown RBP13.58□□□□□ -0.24
VRK3-219ENST00000600137 PHYKPLQ8IUZ5 450 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 NAXDQ8IW45 347 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 SFTPA2Q8IWL1 248 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 NXPE1Q8N323 547 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 EID2Q8N6I1 236 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 LRRN4CLQ8ND94 238 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 PPHLN1Q8NEY8 458 aaKnown RBP13.58□□□□□ -0.24
VRK3-219ENST00000600137 OR4C6Q8NH72 309 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 NAT14Q8WUY8 206 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 RTKNQ9BST9 563 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 SLC13A1Q9BZW2 595 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 DPH5Q9H2P9 285 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 RMI1Q9H9A7 625 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 WHRNQ9P202 907 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 GULP1Q9UBP9 304 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 ANAPC5Q9UJX4 755 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 PIKFYVEQ9Y2I7 2098 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 SPEGQ15772 3267 aa13.58□□□□□ -0.24
VRK3-219ENST00000600137 MAGEB16A2A368 324 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 DCDC2BA2VCK2 349 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 GPR89AB7ZAQ6 455 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 E7ESA3 106 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 H3BM21 787 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 SMAPO00193 183 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 TPP1O14773 563 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 GIPC1O14908 333 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 GRID2O43424 1007 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 SIGLEC6O43699 453 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 CDK14O94921 469 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 GPR89BP0CG08 455 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 AK4P27144 223 aaPredicted RBP13.57□□□□□ -0.24
VRK3-219ENST00000600137 GRK6P43250 576 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 CACNG1Q06432 222 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 TCEA2Q15560 299 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 DBN1Q16643 649 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 PROX2Q3B8N5 592 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 OGFOD3Q6PK18 319 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 SERPINA9Q86WD7 417 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 SDR16C5Q8N3Y7 309 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 FSTL5Q8N475 847 aaPredicted RBP13.57□□□□□ -0.24
VRK3-219ENST00000600137 DEFB124Q8NES8 71 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 OR4L1Q8NH43 312 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 RHBDD1Q8TEB9 315 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 ART4Q93070 314 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 BOCQ9BWV1 1114 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 CARD6Q9BX69 1037 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 SPATS2LQ9NUQ6 558 aaKnown RBP13.57□□□□□ -0.24
VRK3-219ENST00000600137 ZDHHC3Q9NYG2 299 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms