RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, human

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT5H-216	ENST00000599335	GABRD	O14764	452 aa		11.27	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ZBTB24	O43167	697 aa	Predicted RBP	11.27	□□□□□ -0.61
SUPT5H-216	ENST00000599335	MSI1	O43347	362 aa	Known RBP	11.27	□□□□□ -0.61
SUPT5H-216	ENST00000599335	GSTM1	P09488	218 aa		11.27	□□□□□ -0.61
SUPT5H-216	ENST00000599335	MX2	P20592	715 aa		11.27	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SLC5A3	P53794	718 aa		11.27	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SLC18A1	P54219	525 aa		11.27	□□□□□ -0.61
SUPT5H-216	ENST00000599335	BST1	Q10588	318 aa		11.27	□□□□□ -0.61
SUPT5H-216	ENST00000599335	UPP1	Q16831	310 aa		11.27	□□□□□ -0.61
SUPT5H-216	ENST00000599335	TMPRSS9	Q7Z410	1059 aa		11.27	□□□□□ -0.61
SUPT5H-216	ENST00000599335	KCTD13	Q8WZ19	329 aa		11.27	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	11.27	□□□□□ -0.61
SUPT5H-216	ENST00000599335	TEX12	Q9BXU0	123 aa		11.27	□□□□□ -0.61
SUPT5H-216	ENST00000599335	TP63	Q9H3D4	680 aa	Predicted RBP	11.27	□□□□□ -0.61
SUPT5H-216	ENST00000599335	COG4	Q9H9E3	785 aa		11.27	□□□□□ -0.61
SUPT5H-216	ENST00000599335	TMLHE	Q9NVH6	421 aa		11.27	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ARMCX1	Q9P291	453 aa		11.27	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CYB5R1	Q9UHQ9	305 aa		11.27	□□□□□ -0.61
SUPT5H-216	ENST00000599335	FBXL21	Q9UKT6	434 aa		11.27	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SOX1	O00570	391 aa	Predicted RBP	11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	TPP1	O14773	563 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	LRIG2	O94898	1065 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SNAP29	O95721	258 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	F9	P00740	461 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	GRK2	P25098	689 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	TTK	P33981	857 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	GARS	P41250	739 aa	Known RBP	11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	STT3A	P46977	705 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	RPP30	P78346	268 aa	Known RBP	11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PRPSAP1	Q14558	356 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	RSBN1	Q5VWQ0	802 aa	Predicted RBP	11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CEP68	Q76N32	757 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	KCTD20	Q7Z5Y7	419 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	TAC4	Q86UU9	113 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	C10orf82	Q8WW14	230 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CCDC124	Q96CT7	223 aa	Known RBP	11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SNX13	Q9Y5W8	968 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	HCFC2	Q9Y5Z7	792 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ATG2B	Q96BY7	2078 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ASNA1	O43681	348 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	OLFM2	O95897	454 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	NFKB1	P19838	968 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	GMPR	P36959	345 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ESRRG	P62508	458 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	TRAP1	Q12931	704 aa	Known RBP	11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SHE	Q5VZ18	495 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	LPCAT4	Q643R3	524 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PAOX	Q6QHF9	649 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	TPGS1	Q6ZTW0	290 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ZNF534	Q76KX8	674 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	IPMK	Q8NFU5	416 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	AGR3	Q8TD06	166 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	MZB1	Q8WU39	189 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CLPTM1L	Q96KA5	538 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	OSGEPL1	Q9H4B0	414 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SSU72	Q9NP77	194 aa	Known RBP	11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	HCFC1R1	Q9NWW0	138 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	RCOR3	Q9P2K3	495 aa	Predicted RBP	11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	FBXW11	Q9UKB1	542 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PLLP	Q9Y342	182 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	POLR1C	O15160	346 aa	Predicted RBP	11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PTPN3	P26045	913 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PPM1J	Q5JR12	505 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CERCAM	Q5T4B2	595 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ITPRIPL1	Q6GPH6	555 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	IDO2	Q6ZQW0	420 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	DCDC5	Q6ZRR9	648 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	LPCAT2	Q7L5N7	544 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CLIP4	Q8N3C7	705 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	MTBP	Q96DY7	904 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CNDP2	Q96KP4	475 aa	Known RBP	11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CYP2S1	Q96SQ9	504 aa		11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	C20orf96	Q9NUD7	363 aa	Predicted RBP	11.26	□□□□□ -0.61
SUPT5H-216	ENST00000599335	GPR179	Q6PRD1	2367 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	C15orf38-AP3S2	A0A0A6YYH1	394 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	C1orf232	A0A0U1RR37	186 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CFAP99	D6REC4	459 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	TSPAN3	O60637	253 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	RASGRP1	O95267	797 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SFTPC	P11686	197 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PGAM1	P18669	254 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PRKCH	P24723	683 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	G0S2	P27469	103 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SERPINB1	P30740	379 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	GRIA2	P42262	883 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	KCNJ5	P48544	419 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	OTUD1	Q5VV17	481 aa	Predicted RBP	11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ARC	Q7LC44	396 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CMC1	Q7Z7K0	106 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ADGRD2	Q7Z7M1	963 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PSTK	Q8IV42	348 aa	Known RBP	11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PPP4R1	Q8TF05	950 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PIF1	Q9H611	641 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PCDHGA10	Q9Y5H3	936 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PSAT1	Q9Y617	370 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	NUMBL	Q9Y6R0	609 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ZNF236	Q9UL36	1845 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	OR5K4	A6NMS3	321 aa		11.25	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ALX3	O95076	343 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms