RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 SPATA16Q9BXB7 569 aa14.87□□□□□ -0.03
TRIM28-207ENST00000597136 IL26Q9NPH9 171 aa14.87□□□□□ -0.03
TRIM28-207ENST00000597136 KCTD5Q9NXV2 234 aa14.87□□□□□ -0.03
TRIM28-207ENST00000597136 TMPRSS11EQ9UL52 423 aa14.87□□□□□ -0.03
TRIM28-207ENST00000597136 TMEM98Q9Y2Y6 226 aa14.87□□□□□ -0.03
TRIM28-207ENST00000597136 PKP3Q9Y446 797 aa14.87□□□□□ -0.03
TRIM28-207ENST00000597136 TCRBV9S1A1TA0A576 114 aa14.86□□□□□ -0.03
TRIM28-207ENST00000597136 RGSL1A5PLK6 1076 aa14.86□□□□□ -0.03
TRIM28-207ENST00000597136 GAPDHSO14556 408 aaPredicted RBP14.86□□□□□ -0.03
TRIM28-207ENST00000597136 DYNC1I1O14576 645 aa14.86□□□□□ -0.03
TRIM28-207ENST00000597136 TM4SF5O14894 197 aa14.86□□□□□ -0.03
TRIM28-207ENST00000597136 GPR39O43194 453 aa14.86□□□□□ -0.03
TRIM28-207ENST00000597136 POLD2P49005 469 aa14.86□□□□□ -0.03
TRIM28-207ENST00000597136 ARSDP51689 593 aa14.86□□□□□ -0.03
TRIM28-207ENST00000597136 LIMK1P53667 647 aa14.86□□□□□ -0.03
TRIM28-207ENST00000597136 ARHGAP8P85298 464 aa14.86□□□□□ -0.03
TRIM28-207ENST00000597136 CDK3Q00526 305 aa14.86□□□□□ -0.03
TRIM28-207ENST00000597136 FRG1Q14331 258 aaKnown RBP14.86□□□□□ -0.03
TRIM28-207ENST00000597136 SLC29A2Q14542 456 aa14.86□□□□□ -0.03
TRIM28-207ENST00000597136 TCEA2Q15560 299 aa14.86□□□□□ -0.03
TRIM28-207ENST00000597136 ZNF648Q5T619 568 aaPredicted RBP14.86□□□□□ -0.03
TRIM28-207ENST00000597136 ANKRD12Q6UB98 2062 aa14.86□□□□□ -0.03
TRIM28-207ENST00000597136 MACC1Q6ZN28 852 aa14.86□□□□□ -0.03
TRIM28-207ENST00000597136 CYS1Q717R9 158 aa14.86□□□□□ -0.03
TRIM28-207ENST00000597136 RD3Q7Z3Z2 195 aa14.86□□□□□ -0.03
TRIM28-207ENST00000597136 RAVER1Q8IY67 606 aaKnown RBP14.86□□□□□ -0.03
TRIM28-207ENST00000597136 UNC5BQ8IZJ1 945 aa14.86□□□□□ -0.03
TRIM28-207ENST00000597136 NETO1Q8TDF5 533 aa14.86□□□□□ -0.03
TRIM28-207ENST00000597136 OR1E3Q8WZA6 343 aa14.86□□□□□ -0.03
TRIM28-207ENST00000597136 HDAC10Q969S8 669 aa14.86□□□□□ -0.03
TRIM28-207ENST00000597136 CAMK1GQ96NX5 476 aa14.86□□□□□ -0.03
TRIM28-207ENST00000597136 WDR26Q9H7D7 661 aa14.86□□□□□ -0.03
TRIM28-207ENST00000597136 FGF22Q9HCT0 170 aa14.86□□□□□ -0.03
TRIM28-207ENST00000597136 UCKL1Q9NWZ5 548 aa14.86□□□□□ -0.03
TRIM28-207ENST00000597136 MOCS1Q9NZB8 636 aa14.86□□□□□ -0.03
TRIM28-207ENST00000597136 BTBD3Q9Y2F9 522 aa14.86□□□□□ -0.03
TRIM28-207ENST00000597136 CACNB4O00305 520 aaPredicted RBP14.85□□□□□ -0.03
TRIM28-207ENST00000597136 TOR1BO14657 336 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 UGT1A9O60656 530 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 VAPBO95292 243 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 CSF2P04141 144 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 CEACAM5P06731 702 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 ABHD2P08910 425 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 HOXC4P09017 264 aaPredicted RBP14.85□□□□□ -0.03
TRIM28-207ENST00000597136 PAMP19021 973 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 UGT1A6P19224 532 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 UGT1A1P22309 533 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 UGT1A4P22310 534 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 ARNTP27540 789 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 PHBP35232 272 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 UGT1A3P35503 534 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 UGT1A5P35504 534 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 HADHAP40939 763 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 ARCN1P48444 511 aaKnown RBP14.85□□□□□ -0.03
TRIM28-207ENST00000597136 KIAA1024LP59773 190 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 PTK2BQ14289 1009 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 LONRF1Q17RB8 773 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 ALG11Q2TAA5 492 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 KIAA0930Q6ICG6 404 aaPredicted RBP14.85□□□□□ -0.03
TRIM28-207ENST00000597136 TRMT10BQ6PF06 316 aaKnown RBP14.85□□□□□ -0.03
TRIM28-207ENST00000597136 ADAMTSL4Q6UY14 1074 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 KANSL1Q7Z3B3 1105 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 HID1Q8IV36 788 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 SLC25A45Q8N413 288 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 SAP25Q8TEE9 199 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 CDKN2AIPNLQ96HQ2 116 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 TBATAQ96M53 351 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 WDR92Q96MX6 357 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 FUT8Q9BYC5 575 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 SUDS3Q9H7L9 328 aaPredicted RBP14.85□□□□□ -0.03
TRIM28-207ENST00000597136 UGT1A7Q9HAW7 530 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 UGT1A10Q9HAW8 530 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 UGT1A8Q9HAW9 530 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 PHPT1Q9NRX4 125 aaPredicted RBP14.85□□□□□ -0.03
TRIM28-207ENST00000597136 FKBPLQ9UIM3 349 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 OAS3Q9Y6K5 1087 aaKnown RBP14.85□□□□□ -0.03
TRIM28-207ENST00000597136 SLC30A4O14863 429 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 SH3BP5O60239 455 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 DFNA5O60443 496 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 MYCLP1P12525 358 aaPredicted RBP14.85□□□□□ -0.03
TRIM28-207ENST00000597136 JUNDP17535 347 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 DGKAP23743 735 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 TEAD1P28347 426 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 DCDC1P59894 354 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 C1orf61Q13536 156 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 CHRNA6Q15825 494 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 ATP13A5Q4VNC0 1218 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 DOK6Q6PKX4 331 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 FAM151BQ6UXP7 276 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 DBX2Q6ZNG2 339 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 PARGQ86W56 976 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 OR56A4Q8NGH8 313 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 UHMK1Q8TAS1 419 aaKnown RBP14.85□□□□□ -0.03
TRIM28-207ENST00000597136 FBF1Q8TES7 1133 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 PDXPQ96GD0 296 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 COX14Q96I36 57 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 HIC2Q96JB3 615 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 IL1RAPL1Q9NZN1 696 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 NFKBIL1Q9UBC1 381 aaPredicted RBP14.85□□□□□ -0.03
TRIM28-207ENST00000597136 RABGEF1Q9UJ41 708 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms