RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 PPARDQ03181 441 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 KLRB1Q12918 225 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 DPYSQ14117 519 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 TCEA2Q15560 299 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 HIF1AQ16665 826 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 LACTB2Q53H82 288 aaPredicted RBP12.81□□□□□ -0.36
SCAF1-202ENST00000595242 RABGAP1LQ5R372 815 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 PHF19Q5T6S3 580 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 ANKRD22Q5VYY1 191 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 LVRNQ6Q4G3 990 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 PPP1R21Q6ZMI0 780 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 ZNF771Q7L3S4 317 aaPredicted RBP12.81□□□□□ -0.36
SCAF1-202ENST00000595242 ZC3H18Q86VM9 953 aaKnown RBP12.81□□□□□ -0.36
SCAF1-202ENST00000595242 OR6C4Q8NGE1 309 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 GPBAR1Q8TDU6 330 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 EPS8L3Q8TE67 593 aaKnown RBP12.81□□□□□ -0.36
SCAF1-202ENST00000595242 PRMT1Q99873 361 aaKnown RBP12.81□□□□□ -0.36
SCAF1-202ENST00000595242 C10orf88Q9H8K7 445 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 SAYSD1Q9NPB0 183 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 DTLQ9NZJ0 730 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 TNRC6AQ8NDV7 1962 aaKnown RBP12.81□□□□□ -0.36
SCAF1-202ENST00000595242 C5orf60A6NFR6 353 aa12.8□□□□□ -0.36
SCAF1-202ENST00000595242 ZNF891A8MT65 544 aaPredicted RBP12.8□□□□□ -0.36
SCAF1-202ENST00000595242 E7EVH7 732 aa12.8□□□□□ -0.36
SCAF1-202ENST00000595242 KCNN4O15554 427 aa12.8□□□□□ -0.36
SCAF1-202ENST00000595242 VPS4BO75351 444 aa12.8□□□□□ -0.36
SCAF1-202ENST00000595242 ITGB7P26010 798 aa12.8□□□□□ -0.36
SCAF1-202ENST00000595242 COL8A1P27658 744 aa12.8□□□□□ -0.36
SCAF1-202ENST00000595242 RBL1P28749 1068 aa12.8□□□□□ -0.36
SCAF1-202ENST00000595242 MAGOHP61326 146 aaKnown RBP12.8□□□□□ -0.36
SCAF1-202ENST00000595242 GNGT1P63211 74 aa12.8□□□□□ -0.36
SCAF1-202ENST00000595242 GBE1Q04446 702 aa12.8□□□□□ -0.36
SCAF1-202ENST00000595242 SLC10A2Q12908 348 aaPredicted RBP12.8□□□□□ -0.36
SCAF1-202ENST00000595242 PRKD1Q15139 912 aaPredicted RBP12.8□□□□□ -0.36
SCAF1-202ENST00000595242 ELOCQ15369 112 aa12.8□□□□□ -0.36
SCAF1-202ENST00000595242 TMPRSS9Q7Z410 1059 aa12.8□□□□□ -0.36
SCAF1-202ENST00000595242 PYROXD2Q8N2H3 581 aa12.8□□□□□ -0.36
SCAF1-202ENST00000595242 FSTL5Q8N475 847 aaPredicted RBP12.8□□□□□ -0.36
SCAF1-202ENST00000595242 ATP6V0D2Q8N8Y2 350 aa12.8□□□□□ -0.36
SCAF1-202ENST00000595242 CENPTQ96BT3 561 aa12.8□□□□□ -0.36
SCAF1-202ENST00000595242 RPRD1AQ96P16 312 aaPredicted RBP12.8□□□□□ -0.36
SCAF1-202ENST00000595242 CCDC77Q9BR77 488 aa12.8□□□□□ -0.36
SCAF1-202ENST00000595242 CDH19Q9H159 772 aa12.8□□□□□ -0.36
SCAF1-202ENST00000595242 MUC3BQ9H195 1237 aa12.8□□□□□ -0.36
SCAF1-202ENST00000595242 TNKS2Q9H2K2 1166 aa12.8□□□□□ -0.36
SCAF1-202ENST00000595242 SEMA6CQ9H3T2 930 aa12.8□□□□□ -0.36
SCAF1-202ENST00000595242 VPS4AQ9UN37 437 aa12.8□□□□□ -0.36
SCAF1-202ENST00000595242 HEY1Q9Y5J3 304 aa12.8□□□□□ -0.36
SCAF1-202ENST00000595242 ACTL7BQ9Y614 415 aa12.8□□□□□ -0.36
SCAF1-202ENST00000595242 NKX2-8O15522 239 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 SMAD6O43541 496 aaKnown RBP12.79□□□□□ -0.36
SCAF1-202ENST00000595242 AP1G1O43747 822 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 MFSD11O43934 449 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 CDH16O75309 829 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 SEMA7AO75326 666 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 ALPIP09923 528 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 RNF224P0DH78 156 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 CCL4P13236 92 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 TPSB2P20231 275 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 GNLYP22749 145 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 AMPD1P23109 780 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 HTR7P34969 479 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 UGT1A3P35503 534 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 RECQLP46063 649 aaPredicted RBP12.79□□□□□ -0.36
SCAF1-202ENST00000595242 BLKP51451 505 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 ARSDP51689 593 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 YPEL5P62699 121 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 PDIA2Q13087 525 aaKnown RBP12.79□□□□□ -0.36
SCAF1-202ENST00000595242 C16orf72Q14CZ0 275 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 TPSAB1Q15661 275 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 BRMS1LQ5PSV4 323 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 CAPRIN2Q6IMN6 1127 aaKnown RBP12.79□□□□□ -0.36
SCAF1-202ENST00000595242 FBXL22Q6P050 247 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 LRRC31Q6UY01 552 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 LEKR1Q6ZMV7 388 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 MACC1Q6ZN28 852 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 DPY19L3Q6ZPD9 716 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 RFX8Q6ZV50 586 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 SLITRK4Q8IW52 837 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 MCUQ8NE86 351 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 DENND6BQ8NEG7 585 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 ASB12Q8WXK4 309 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 C9orf72Q96LT7 481 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 WDR83Q9BRX9 315 aaKnown RBP12.79□□□□□ -0.36
SCAF1-202ENST00000595242 MAGEB5Q9BZ81 275 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 KLC2Q9H0B6 622 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 CENPHQ9H3R5 247 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 ETNK2Q9NVF9 386 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 APPL1Q9UKG1 709 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 GPR34Q9UPC5 381 aa12.79□□□□□ -0.36
SCAF1-202ENST00000595242 SETD2Q9BYW2 2564 aaPredicted RBP12.78□□□□□ -0.36
SCAF1-202ENST00000595242 ZNF106Q9H2Y7 1883 aaKnown RBP12.78□□□□□ -0.36
SCAF1-202ENST00000595242 ZFHX3Q15911 3703 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 OTOGQ6ZRI0 2925 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 TCRBV7S3A2A0A539 114 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 I6L893 689 aaPredicted RBP12.78□□□□□ -0.36
SCAF1-202ENST00000595242 EEF2KO00418 725 aaKnown RBP12.78□□□□□ -0.36
SCAF1-202ENST00000595242 TSPAN6O43657 245 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 SNAP91O60641 907 aa12.78□□□□□ -0.36
SCAF1-202ENST00000595242 PRKAR1AP10644 381 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms