RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 ILF3Q12906 894 aaKnown RBP eCLIP15.19■□□□□ 0.02
USE1-206ENST00000595101 GPRC6AQ5T6X5 926 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 LVRNQ6Q4G3 990 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 GPR156Q8NFN8 814 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 IFI44Q8TCB0 444 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 ASB8Q9H765 288 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 FEZ2Q9UHY8 353 aaPredicted RBP15.19■□□□□ 0.02
USE1-206ENST00000595101 PADI4Q9UM07 663 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 CHUKO15111 745 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 AVILO75366 819 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 MAZP56270 477 aaKnown RBP15.19■□□□□ 0.02
USE1-206ENST00000595101 SESN2P58004 480 aaPredicted RBP15.19■□□□□ 0.02
USE1-206ENST00000595101 NFATC2Q13469 925 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 KCNJ11Q14654 390 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 NR0B2Q15466 257 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 ZDHHC20Q5W0Z9 365 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 OGFOD3Q6PK18 319 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 SYT10Q6XYQ8 523 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 EFL1Q7Z2Z2 1120 aaKnown RBP15.19■□□□□ 0.02
USE1-206ENST00000595101 NAGSQ8N159 534 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 ARL10Q8N8L6 244 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 RASGEF1AQ8N9B8 481 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 SCG3Q8WXD2 468 aaKnown RBP15.19■□□□□ 0.02
USE1-206ENST00000595101 LRRC45Q96CN5 670 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 CDKN2AIPNLQ96HQ2 116 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 GSDMCQ9BYG8 508 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 NLE1Q9NVX2 485 aaPredicted RBP15.19■□□□□ 0.02
USE1-206ENST00000595101 PCDHGA1Q9Y5H4 931 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 ASXL3Q9C0F0 2248 aa15.18■□□□□ 0.02
USE1-206ENST00000595101 TMEM63AO94886 807 aa15.18■□□□□ 0.02
USE1-206ENST00000595101 ECEL1O95672 775 aa15.18■□□□□ 0.02
USE1-206ENST00000595101 MC4RP32245 332 aa15.18■□□□□ 0.02
USE1-206ENST00000595101 B4GALNT1Q00973 533 aa15.18■□□□□ 0.02
USE1-206ENST00000595101 INSM1Q01101 510 aaPredicted RBP15.18■□□□□ 0.02
USE1-206ENST00000595101 DET1Q7L5Y6 550 aa15.18■□□□□ 0.02
USE1-206ENST00000595101 C11orf96Q7Z7L8 435 aa15.18■□□□□ 0.02
USE1-206ENST00000595101 PIANPQ8IYJ0 282 aa15.18■□□□□ 0.02
USE1-206ENST00000595101 SDR16C5Q8N3Y7 309 aa15.18■□□□□ 0.02
USE1-206ENST00000595101 BEND7Q8N7W2 519 aaPredicted RBP15.18■□□□□ 0.02
USE1-206ENST00000595101 DDHD1Q8NEL9 900 aa15.18■□□□□ 0.02
USE1-206ENST00000595101 OR13J1Q8NGT2 312 aa15.18■□□□□ 0.02
USE1-206ENST00000595101 DTX3LQ8TDB6 740 aa15.18■□□□□ 0.02
USE1-206ENST00000595101 ZDHHC1Q8WTX9 485 aa15.18■□□□□ 0.02
USE1-206ENST00000595101 CPT1BQ92523 772 aa15.18■□□□□ 0.02
USE1-206ENST00000595101 EIF2B3Q9NR50 452 aaKnown RBP15.18■□□□□ 0.02
USE1-206ENST00000595101 CHRAC1Q9NRG0 131 aa15.18■□□□□ 0.02
USE1-206ENST00000595101 TBC1D29Q9UFV1 150 aa15.18■□□□□ 0.02
USE1-206ENST00000595101 ANGPTL2Q9UKU9 493 aa15.18■□□□□ 0.02
USE1-206ENST00000595101 MYLKQ15746 1914 aa15.17■□□□□ 0.02
USE1-206ENST00000595101 OR2AG2A6NM03 316 aa15.17■□□□□ 0.02
USE1-206ENST00000595101 TRIM16O95361 564 aa15.17■□□□□ 0.02
USE1-206ENST00000595101 FNTAP49354 379 aa15.17■□□□□ 0.02
USE1-206ENST00000595101 ETF1P62495 437 aaKnown RBP15.17■□□□□ 0.02
USE1-206ENST00000595101 MRPS25P82663 173 aaKnown RBP15.17■□□□□ 0.02
USE1-206ENST00000595101 PDE1BQ01064 536 aa15.17■□□□□ 0.02
USE1-206ENST00000595101 ITGA9Q13797 1035 aa15.17■□□□□ 0.02
USE1-206ENST00000595101 SMAD1Q15797 465 aaKnown RBP15.17■□□□□ 0.02
USE1-206ENST00000595101 KLHL7Q8IXQ5 586 aa15.17■□□□□ 0.02
USE1-206ENST00000595101 SGF29Q96ES7 293 aa15.17■□□□□ 0.02
USE1-206ENST00000595101 KLC4Q9NSK0 619 aa15.17■□□□□ 0.02
USE1-206ENST00000595101 APPL1Q9UKG1 709 aa15.17■□□□□ 0.02
USE1-206ENST00000595101 DNAJC16Q9Y2G8 782 aa15.17■□□□□ 0.02
USE1-206ENST00000595101 GOLGA6L10A0A0M3HER8 536 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 AGAP14A8MT82 685 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 GOLGA8MH3BSY2 632 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 SNX2O60749 519 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 HADHAP40939 763 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 PTGIRP43119 386 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 HLTFQ14527 1009 aaKnown RBP eCLIP15.16■□□□□ 0.02
USE1-206ENST00000595101 ZRANB3Q5FWF4 1079 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 MPP5Q8N3R9 675 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 STYXQ8WUJ0 223 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 HDAC10Q969S8 669 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 CCDC74AQ96AQ1 378 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 TRIM56Q9BRZ2 755 aaKnown RBP15.16■□□□□ 0.02
USE1-206ENST00000595101 PRDM8Q9NQV8 689 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 SMOXQ9NWM0 555 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 RNF215Q9Y6U7 377 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 LAMA5O15230 3695 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 CHD8Q9HCK8 2581 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.16■□□□□ 0.02
USE1-206ENST00000595101 CCDC162PA2VCL2 907 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 H7C0S8 307 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 SGTAO43765 313 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 VEGFDO43915 354 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 OPA1O60313 960 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 PSMA3P25788 255 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 MGAT1P26572 445 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 CASQ1P31415 396 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 DUSP3P51452 185 aaPredicted RBP15.16■□□□□ 0.02
USE1-206ENST00000595101 SHC2P98077 582 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 FOXK2Q01167 660 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 LDLRAP1Q5SW96 308 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 TSTD2Q5T7W7 516 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 HES3Q5TGS1 186 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 TMEM220Q6QAJ8 160 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 CES3Q6UWW8 571 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 C4orf22Q6V702 233 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 TMPRSS7Q7RTY8 843 aa15.16■□□□□ 0.02
USE1-206ENST00000595101 SNX20Q7Z614 316 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms