RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 GPRC6AQ5T6X5 926 aa25.47■■□□□ 1.67
TRIM28-204ENST00000594806 TSTD2Q5T7W7 516 aa25.47■■□□□ 1.67
TRIM28-204ENST00000594806 OGFOD3Q6PK18 319 aa25.47■■□□□ 1.67
TRIM28-204ENST00000594806 PPIL6Q8IXY8 311 aa25.47■■□□□ 1.67
TRIM28-204ENST00000594806 FAM46DQ8NEK8 389 aa25.47■■□□□ 1.67
TRIM28-204ENST00000594806 TOR4AQ9NXH8 423 aa25.47■■□□□ 1.67
TRIM28-204ENST00000594806 ASIC3Q9UHC3 531 aa25.47■■□□□ 1.67
TRIM28-204ENST00000594806 CRLS1Q9UJA2 301 aa25.47■■□□□ 1.67
TRIM28-204ENST00000594806 GPR34Q9UPC5 381 aa25.47■■□□□ 1.67
TRIM28-204ENST00000594806 CACNA1AO00555 2505 aa25.47■■□□□ 1.67
TRIM28-204ENST00000594806 SPTBN2O15020 2390 aa25.46■■□□□ 1.67
TRIM28-204ENST00000594806 KMOO15229 486 aa25.46■■□□□ 1.67
TRIM28-204ENST00000594806 MC4RP32245 332 aa25.46■■□□□ 1.67
TRIM28-204ENST00000594806 ACADVLP49748 655 aa25.46■■□□□ 1.67
TRIM28-204ENST00000594806 SESN2P58004 480 aaPredicted RBP25.46■■□□□ 1.67
TRIM28-204ENST00000594806 ACVR1Q04771 509 aa25.46■■□□□ 1.67
TRIM28-204ENST00000594806 CCDC38Q502W7 563 aa25.46■■□□□ 1.67
TRIM28-204ENST00000594806 ARL10Q8N8L6 244 aa25.46■■□□□ 1.67
TRIM28-204ENST00000594806 OR6C4Q8NGE1 309 aa25.46■■□□□ 1.67
TRIM28-204ENST00000594806 ZNF514Q96K75 400 aaPredicted RBP25.46■■□□□ 1.67
TRIM28-204ENST00000594806 SUDS3Q9H7L9 328 aaPredicted RBP25.46■■□□□ 1.67
TRIM28-204ENST00000594806 MRM3Q9HC36 420 aaKnown RBP25.46■■□□□ 1.67
TRIM28-204ENST00000594806 TCRBV7S3A2A0A539 114 aa25.45■■□□□ 1.66
TRIM28-204ENST00000594806 KCNJ13O60928 360 aa25.45■■□□□ 1.66
TRIM28-204ENST00000594806 GP1BAP07359 652 aa25.45■■□□□ 1.66
TRIM28-204ENST00000594806 RALBP11234 206 aa25.45■■□□□ 1.66
TRIM28-204ENST00000594806 CLCNKAP51800 687 aa25.45■■□□□ 1.66
TRIM28-204ENST00000594806 FOXK2Q01167 660 aa25.45■■□□□ 1.66
TRIM28-204ENST00000594806 CACNG1Q06432 222 aa25.45■■□□□ 1.66
TRIM28-204ENST00000594806 ZNF534Q76KX8 674 aa25.45■■□□□ 1.66
TRIM28-204ENST00000594806 SLCO6A1Q86UG4 719 aa25.45■■□□□ 1.66
TRIM28-204ENST00000594806 LRRTM4Q86VH4 590 aa25.45■■□□□ 1.66
TRIM28-204ENST00000594806 NRROSQ86YC3 692 aa25.45■■□□□ 1.66
TRIM28-204ENST00000594806 SPATA4Q8NEY3 305 aa25.45■■□□□ 1.66
TRIM28-204ENST00000594806 CCL4L1Q8NHW4 92 aa25.45■■□□□ 1.66
TRIM28-204ENST00000594806 NAT6Q93015 286 aa25.45■■□□□ 1.66
TRIM28-204ENST00000594806 SGSM3Q96HU1 749 aa25.45■■□□□ 1.66
TRIM28-204ENST00000594806 ARFGAP3Q9NP61 516 aa25.45■■□□□ 1.66
TRIM28-204ENST00000594806 TAAR2Q9P1P5 351 aa25.45■■□□□ 1.66
TRIM28-204ENST00000594806 DNMT3AQ9Y6K1 912 aaPredicted RBP25.45■■□□□ 1.66
TRIM28-204ENST00000594806 TRBV5-4A0A0C4DH59 114 aa25.44■■□□□ 1.66
TRIM28-204ENST00000594806 SMAPO00193 183 aa25.44■■□□□ 1.66
TRIM28-204ENST00000594806 RFPL3O75679 317 aa25.44■■□□□ 1.66
TRIM28-204ENST00000594806 ADRB1P08588 477 aa25.44■■□□□ 1.66
TRIM28-204ENST00000594806 MSH3P20585 1137 aa25.44■■□□□ 1.66
TRIM28-204ENST00000594806 E2F1Q01094 437 aa25.44■■□□□ 1.66
TRIM28-204ENST00000594806 DNAJC3Q13217 504 aa25.44■■□□□ 1.66
TRIM28-204ENST00000594806 ZNF648Q5T619 568 aaPredicted RBP25.44■■□□□ 1.66
TRIM28-204ENST00000594806 HOOK3Q86VS8 718 aa25.44■■□□□ 1.66
TRIM28-204ENST00000594806 NXPE1Q8N323 547 aa25.44■■□□□ 1.66
TRIM28-204ENST00000594806 NAT8LQ8N9F0 302 aa25.44■■□□□ 1.66
TRIM28-204ENST00000594806 OR13J1Q8NGT2 312 aa25.44■■□□□ 1.66
TRIM28-204ENST00000594806 ADAMTS14Q8WXS8 1223 aa25.44■■□□□ 1.66
TRIM28-204ENST00000594806 DPEP2Q9H4A9 486 aa25.44■■□□□ 1.66
TRIM28-204ENST00000594806 LY6G6EA0A0G2JKS1 128 aa25.43■■□□□ 1.66
TRIM28-204ENST00000594806 MAGEB16A2A368 324 aa25.43■■□□□ 1.66
TRIM28-204ENST00000594806 EME2A4GXA9 379 aaPredicted RBP25.43■■□□□ 1.66
TRIM28-204ENST00000594806 CFAP99D6REC4 459 aa25.43■■□□□ 1.66
TRIM28-204ENST00000594806 DNALI1O14645 258 aaPredicted RBP25.43■■□□□ 1.66
TRIM28-204ENST00000594806 NDC80O14777 642 aa25.43■■□□□ 1.66
TRIM28-204ENST00000594806 MTX2O75431 263 aa25.43■■□□□ 1.66
TRIM28-204ENST00000594806 ACTR1BP42025 376 aa25.43■■□□□ 1.66
TRIM28-204ENST00000594806 ACTR1AP61163 376 aa25.43■■□□□ 1.66
TRIM28-204ENST00000594806 CKAP4Q07065 602 aaKnown RBP25.43■■□□□ 1.66
TRIM28-204ENST00000594806 TCEA2Q15560 299 aa25.43■■□□□ 1.66
TRIM28-204ENST00000594806 KHDC1Q4VXA5 237 aaKnown RBP25.43■■□□□ 1.66
TRIM28-204ENST00000594806 ZRANB3Q5FWF4 1079 aa25.43■■□□□ 1.66
TRIM28-204ENST00000594806 ANKRD22Q5VYY1 191 aa25.43■■□□□ 1.66
TRIM28-204ENST00000594806 CHST15Q7LFX5 561 aaPredicted RBP25.43■■□□□ 1.66
TRIM28-204ENST00000594806 ZNF572Q7Z3I7 529 aaPredicted RBP25.43■■□□□ 1.66
TRIM28-204ENST00000594806 JAMLQ86YT9 394 aa25.43■■□□□ 1.66
TRIM28-204ENST00000594806 SLC35F3Q8IY50 421 aa25.43■■□□□ 1.66
TRIM28-204ENST00000594806 GPR156Q8NFN8 814 aa25.43■■□□□ 1.66
TRIM28-204ENST00000594806 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.43■■□□□ 1.66
TRIM28-204ENST00000594806 DCUN1D1Q96GG9 259 aa25.43■■□□□ 1.66
TRIM28-204ENST00000594806 COPS8Q99627 209 aa25.43■■□□□ 1.66
TRIM28-204ENST00000594806 TIMM29Q9BSF4 260 aa25.43■■□□□ 1.66
TRIM28-204ENST00000594806 KIFC1Q9BW19 673 aa25.43■■□□□ 1.66
TRIM28-204ENST00000594806 CDC23Q9UJX2 597 aa25.43■■□□□ 1.66
TRIM28-204ENST00000594806 U3KQA8 63 aa25.43■■□□□ 1.66
TRIM28-204ENST00000594806 KLHL33A6NCF5 533 aa25.42■■□□□ 1.66
TRIM28-204ENST00000594806 TMEM63AO94886 807 aa25.42■■□□□ 1.66
TRIM28-204ENST00000594806 VCLP18206 1134 aa25.42■■□□□ 1.66
TRIM28-204ENST00000594806 MGAT1P26572 445 aa25.42■■□□□ 1.66
TRIM28-204ENST00000594806 AK4P27144 223 aaPredicted RBP25.42■■□□□ 1.66
TRIM28-204ENST00000594806 AKT1P31749 480 aa25.42■■□□□ 1.66
TRIM28-204ENST00000594806 TUBB2AQ13885 445 aa25.42■■□□□ 1.66
TRIM28-204ENST00000594806 RNASEH2BQ5TBB1 312 aaKnown RBP25.42■■□□□ 1.66
TRIM28-204ENST00000594806 LYPLAL1Q5VWZ2 237 aa25.42■■□□□ 1.66
TRIM28-204ENST00000594806 SLC30A9Q6PML9 568 aa25.42■■□□□ 1.66
TRIM28-204ENST00000594806 AFTPHQ6ULP2 937 aa25.42■■□□□ 1.66
TRIM28-204ENST00000594806 MAATS1Q7Z4T9 603 aa25.42■■□□□ 1.66
TRIM28-204ENST00000594806 CAND1Q86VP6 1230 aaKnown RBP25.42■■□□□ 1.66
TRIM28-204ENST00000594806 KRT12Q99456 494 aa25.42■■□□□ 1.66
TRIM28-204ENST00000594806 TTC1Q99614 292 aa25.42■■□□□ 1.66
TRIM28-204ENST00000594806 TUBB2BQ9BVA1 445 aa25.42■■□□□ 1.66
TRIM28-204ENST00000594806 CHRAC1Q9NRG0 131 aa25.42■■□□□ 1.66
TRIM28-204ENST00000594806 SPATS2LQ9NUQ6 558 aaKnown RBP25.42■■□□□ 1.66
TRIM28-204ENST00000594806 ZDHHC3Q9NYG2 299 aa25.42■■□□□ 1.66
TRIM28-204ENST00000594806 GULP1Q9UBP9 304 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms