RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 ATP13A5Q4VNC0 1218 aa15.09■□□□□ 0.01
TRIM28-203ENST00000593582 BROXQ5VW32 411 aa15.09■□□□□ 0.01
TRIM28-203ENST00000593582 USP53Q70EK8 1073 aa15.09■□□□□ 0.01
TRIM28-203ENST00000593582 ADGRG6Q86SQ4 1221 aa15.09■□□□□ 0.01
TRIM28-203ENST00000593582 SPACA3Q8IXA5 215 aa15.09■□□□□ 0.01
TRIM28-203ENST00000593582 TTC30BQ8N4P2 665 aa15.09■□□□□ 0.01
TRIM28-203ENST00000593582 RNF10Q8N5U6 811 aaKnown RBP15.09■□□□□ 0.01
TRIM28-203ENST00000593582 TTC13Q8NBP0 860 aa15.09■□□□□ 0.01
TRIM28-203ENST00000593582 KCNE4Q8WWG9 221 aa15.09■□□□□ 0.01
TRIM28-203ENST00000593582 CCDC97Q96F63 343 aaPredicted RBP15.09■□□□□ 0.01
TRIM28-203ENST00000593582 SPATA13Q96N96 652 aa15.09■□□□□ 0.01
TRIM28-203ENST00000593582 SLC38A3Q99624 504 aa15.09■□□□□ 0.01
TRIM28-203ENST00000593582 FICDQ9BVA6 458 aa15.09■□□□□ 0.01
TRIM28-203ENST00000593582 DPH1Q9BZG8 443 aa15.09■□□□□ 0.01
TRIM28-203ENST00000593582 TSGA10Q9BZW7 698 aa15.09■□□□□ 0.01
TRIM28-203ENST00000593582 STN1Q9H668 368 aaKnown RBP15.09■□□□□ 0.01
TRIM28-203ENST00000593582 IL26Q9NPH9 171 aa15.09■□□□□ 0.01
TRIM28-203ENST00000593582 KCNK4Q9NYG8 393 aa15.09■□□□□ 0.01
TRIM28-203ENST00000593582 AKAP7Q9P0M2 348 aaPredicted RBP15.09■□□□□ 0.01
TRIM28-203ENST00000593582 LOXL2Q9Y4K0 774 aa15.09■□□□□ 0.01
TRIM28-203ENST00000593582 CHUKO15111 745 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 KMOO15229 486 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 CDK14O94921 469 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 EML2O95834 649 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 AGTP01019 485 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 F3P13726 295 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 PSMB4P28070 264 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 CD1CP29017 333 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 SPAM1P38567 509 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 PPM1FP49593 454 aaPredicted RBP15.08■□□□□ 0
TRIM28-203ENST00000593582 GPLD1P80108 840 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 HHEXQ03014 270 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 INSCQ1MX18 579 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 IYDQ6PHW0 289 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 CRTC3Q6UUV7 619 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 TMPRSS9Q7Z410 1059 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 CLEC14AQ86T13 490 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 SLC9B2Q86UD5 537 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 LRRTM4Q86VH4 590 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 SLITRK4Q8IW52 837 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 GDAP1Q8TB36 358 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 CCDC110Q8TBZ0 833 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 DTX3LQ8TDB6 740 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 LRRC45Q96CN5 670 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 CRELD1Q96HD1 420 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 TTC25Q96NG3 672 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 GORASP1Q9BQQ3 440 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 NUDT22Q9BRQ3 303 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 ZMYND15Q9H091 742 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 SEMA6CQ9H3T2 930 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 OSGEPL1Q9H4B0 414 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 KLC4Q9NSK0 619 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 IL17CQ9P0M4 197 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 PISDQ9UG56 409 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 ADGRG1Q9Y653 693 aa15.08■□□□□ 0
TRIM28-203ENST00000593582 ARHGEF17Q96PE2 2063 aaPredicted RBP15.08■□□□□ 0
TRIM28-203ENST00000593582 IGHV1OR21-1A0A087WYE8 117 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 KIR2DS5A0A0G2JLQ3 304 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 A0A0G2JNG1 304 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 GLYATL1P3A0A0U1RQE8 302 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 A6NCN8 305 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 OR5K4A6NMS3 321 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 KIR2DS3K7RE56 304 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 DDX3YO15523 660 aaKnown RBP15.07■□□□□ 0
TRIM28-203ENST00000593582 KLK10O43240 276 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 KRT86O43790 486 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 MTX2O75431 263 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 HGFP14210 728 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 CLCNKAP51800 687 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 SQSTM1Q13501 440 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 ITGA9Q13797 1035 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 GTF2H3Q13889 308 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 KIR2DS5Q14953 304 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 NKAIN2Q5VXU1 208 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 FAM151BQ6UXP7 276 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 RANBP10Q6VN20 620 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 JAMLQ86YT9 394 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 AVL9Q8NBF6 648 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 OR4D9Q8NGE8 314 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 OR10G6Q8NH81 332 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 BRSK1Q8TDC3 778 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 SH3KBP1Q96B97 665 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 AHCYL2Q96HN2 611 aaKnown RBP15.07■□□□□ 0
TRIM28-203ENST00000593582 HES6Q96HZ4 224 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 DPYSL5Q9BPU6 564 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 ZCCHC2Q9C0B9 1178 aaKnown RBP15.07■□□□□ 0
TRIM28-203ENST00000593582 SARS2Q9NP81 518 aaKnown RBP15.07■□□□□ 0
TRIM28-203ENST00000593582 PCDHGA7Q9Y5G6 932 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 CAPN6Q9Y6Q1 641 aa15.07■□□□□ 0
TRIM28-203ENST00000593582 SMG1Q96Q15 3661 aaKnown RBP15.06■□□□□ 0
TRIM28-203ENST00000593582 IGHV5-10-1A0A0J9YXX1 117 aa15.06■□□□□ 0
TRIM28-203ENST00000593582 C5orf60A6NFR6 353 aa15.06■□□□□ 0
TRIM28-203ENST00000593582 C2orf81A6NN90 581 aa15.06■□□□□ 0
TRIM28-203ENST00000593582 AGRPO00253 132 aa15.06■□□□□ 0
TRIM28-203ENST00000593582 STX7O15400 261 aaKnown RBP15.06■□□□□ 0
TRIM28-203ENST00000593582 BUD23O43709 281 aaKnown RBP15.06■□□□□ 0
TRIM28-203ENST00000593582 ZNF7P17097 686 aaPredicted RBP15.06■□□□□ 0
TRIM28-203ENST00000593582 VCLP18206 1134 aa15.06■□□□□ 0
TRIM28-203ENST00000593582 LPOP22079 712 aaPredicted RBP15.06■□□□□ 0
TRIM28-203ENST00000593582 ADRA1AP35348 466 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms