RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 GSTA1P08263 222 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 PRSS56P0CW18 603 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 COL6A2P12110 1019 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 HOXB2P14652 356 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 RPA3P35244 121 aaPredicted RBP13.36□□□□□ -0.27
VMP1-217ENST00000593168 PTGER3P43115 390 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 CDKN1CP49918 316 aaPredicted RBP13.36□□□□□ -0.27
VMP1-217ENST00000593168 COPAP53621 1224 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 LIMK1P53667 647 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 SLC12A2P55011 1212 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 TAS2R39P59534 338 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 RAB10P61026 200 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 CNTN1Q12860 1018 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 ITGA9Q13797 1035 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 AASDHQ4L235 1098 aaPredicted RBP13.36□□□□□ -0.27
VMP1-217ENST00000593168 EOGTQ5NDL2 527 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 RBM20Q5T481 1227 aaKnown RBP13.36□□□□□ -0.27
VMP1-217ENST00000593168 KIAA1211LQ6NV74 962 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 TAS2R42Q7RTR8 314 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 CMC1Q7Z7K0 106 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 NLRP8Q86W28 1048 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 SLC41A1Q8IVJ1 513 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 PNPLA1Q8N8W4 532 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 GPATCH11Q8N954 259 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 ANKRD42Q8N9B4 389 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 ACVR1CQ8NER5 493 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 ULK4Q96C45 1275 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 ELMO2Q96JJ3 720 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 AARSD1Q9BTE6 412 aaKnown RBP13.36□□□□□ -0.27
VMP1-217ENST00000593168 SLC13A1Q9BZW2 595 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 FAM83DQ9H4H8 585 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 FAM96AQ9H5X1 160 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 CD248Q9HCU0 757 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 PCMTD2Q9NV79 361 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 PSD3Q9NYI0 1048 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.36□□□□□ -0.27
VMP1-217ENST00000593168 TLK1Q9UKI8 766 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 GRID1Q9ULK0 1009 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 SCML1Q9UN30 329 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 ANKRD6Q9Y2G4 727 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 FNDC3AQ9Y2H6 1198 aaKnown RBP13.36□□□□□ -0.27
VMP1-217ENST00000593168 CRYL1Q9Y2S2 319 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 PLLPQ9Y342 182 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 FADS3Q9Y5Q0 445 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 ATG2BQ96BY7 2078 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 WNT9AO14904 365 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 MID1O15344 667 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 TSPAN6O43657 245 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 RRP9O43818 475 aaKnown RBP13.35□□□□□ -0.27
VMP1-217ENST00000593168 ASMTLO95671 621 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 ESR1P03372 595 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 ELFN1P0C7U0 828 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 ZNF7P17097 686 aaPredicted RBP13.35□□□□□ -0.27
VMP1-217ENST00000593168 CD9P21926 228 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 HOXA6P31267 233 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 DRD3P35462 400 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 P2RY2P41231 377 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 PXNP49023 591 aaPredicted RBP13.35□□□□□ -0.27
VMP1-217ENST00000593168 LIG3P49916 1009 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 WDR4P57081 412 aaKnown RBP13.35□□□□□ -0.27
VMP1-217ENST00000593168 GUCY1A3Q02108 690 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 ZBTB16Q05516 673 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 ITIH4Q14624 930 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 SEPT7Q16181 437 aaKnown RBP13.35□□□□□ -0.27
VMP1-217ENST00000593168 TAF1BQ53T94 588 aaPredicted RBP13.35□□□□□ -0.27
VMP1-217ENST00000593168 PIP5KL1Q5T9C9 394 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 ZNF549Q6P9A3 640 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 KYAT3Q6YP21 454 aaKnown RBP13.35□□□□□ -0.27
VMP1-217ENST00000593168 RFLNAQ6ZTI6 216 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 CDHR3Q6ZTQ4 885 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 Q6ZVL8 140 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 RAPH1Q70E73 1250 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 ZNF765Q7L2R6 523 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 CLEC14AQ86T13 490 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 SERPINA9Q86WD7 417 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 TMPRSS6Q8IU80 811 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 NXPE1Q8N323 547 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 SYNPOQ8N3V7 929 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 TRAM1L1Q8N609 369 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 FAM131CQ96AQ9 280 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 COQ10AQ96MF6 247 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 IQCGQ9H095 443 aaKnown RBP13.35□□□□□ -0.27
VMP1-217ENST00000593168 VPS11Q9H270 941 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 CCDC68Q9H2F9 335 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 CAB39LQ9H9S4 337 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 POPDC3Q9HBV1 291 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 CRLS1Q9UJA2 301 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 ACOT9Q9Y305 439 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 PCDHB1Q9Y5F3 818 aa13.35□□□□□ -0.27
VMP1-217ENST00000593168 CNOT1A5YKK6 2376 aaKnown RBP13.35□□□□□ -0.27
VMP1-217ENST00000593168 A0A087X1B8 175 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 UBA6A0AVT1 1052 aaPredicted RBP13.34□□□□□ -0.27
VMP1-217ENST00000593168 PRMT5O14744 637 aaPredicted RBP13.34□□□□□ -0.27
VMP1-217ENST00000593168 SHOX2O60902 331 aaPredicted RBP13.34□□□□□ -0.27
VMP1-217ENST00000593168 EPN2O95208 641 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 DNTTP04053 509 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 ZNF806P0C7X5 589 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 SLC35E2BP0CK96 405 aa13.34□□□□□ -0.27
VMP1-217ENST00000593168 PKMP14618 531 aaKnown RBP13.34□□□□□ -0.27
VMP1-217ENST00000593168 UGT1A6P19224 532 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms