RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 BRSK1Q8TDC3 778 aa18■□□□□ 0.47
DDX39A-212ENST00000590260 NAT14Q8WUY8 206 aa18■□□□□ 0.47
DDX39A-212ENST00000590260 ATXN7L3BQ96GX2 97 aa18■□□□□ 0.47
DDX39A-212ENST00000590260 PRR11Q96HE9 360 aaPredicted RBP18■□□□□ 0.47
DDX39A-212ENST00000590260 DEPDC7Q96QD5 511 aa18■□□□□ 0.47
DDX39A-212ENST00000590260 FRMD8P1Q9BZ68 369 aaPredicted RBP18■□□□□ 0.47
DDX39A-212ENST00000590260 NRSN2Q9GZP1 204 aa18■□□□□ 0.47
DDX39A-212ENST00000590260 LRRN3Q9H3W5 708 aa18■□□□□ 0.47
DDX39A-212ENST00000590260 ETNK1Q9HBU6 452 aa18■□□□□ 0.47
DDX39A-212ENST00000590260 ATXN7L1Q9ULK2 861 aaPredicted RBP18■□□□□ 0.47
DDX39A-212ENST00000590260 CELSR3Q9NYQ7 3312 aa18■□□□□ 0.47
DDX39A-212ENST00000590260 ZFHX4Q86UP3 3567 aa18■□□□□ 0.47
DDX39A-212ENST00000590260 TRBV23OR9-2A0A075B6M9 112 aa17.99■□□□□ 0.47
DDX39A-212ENST00000590260 USP27XA6NNY8 438 aa17.99■□□□□ 0.47
DDX39A-212ENST00000590260 STX7O15400 261 aaKnown RBP17.99■□□□□ 0.47
DDX39A-212ENST00000590260 TCEA3O75764 348 aa17.99■□□□□ 0.47
DDX39A-212ENST00000590260 ZNF189O75820 626 aaPredicted RBP17.99■□□□□ 0.47
DDX39A-212ENST00000590260 PNLIPP16233 465 aa17.99■□□□□ 0.47
DDX39A-212ENST00000590260 STIP1P31948 543 aaKnown RBP17.99■□□□□ 0.47
DDX39A-212ENST00000590260 CTSCP53634 463 aa17.99■□□□□ 0.47
DDX39A-212ENST00000590260 TMEM115Q12893 351 aaPredicted RBP17.99■□□□□ 0.47
DDX39A-212ENST00000590260 PLA2G4EQ3MJ16 856 aa17.99■□□□□ 0.47
DDX39A-212ENST00000590260 GPRC6AQ5T6X5 926 aa17.99■□□□□ 0.47
DDX39A-212ENST00000590260 DRICH1Q6PGQ1 229 aaPredicted RBP17.99■□□□□ 0.47
DDX39A-212ENST00000590260 CRTC3Q6UUV7 619 aa17.99■□□□□ 0.47
DDX39A-212ENST00000590260 RBM44Q6ZP01 1051 aaKnown RBP17.99■□□□□ 0.47
DDX39A-212ENST00000590260 CCNJLQ8IV13 435 aa17.99■□□□□ 0.47
DDX39A-212ENST00000590260 SFRP1Q8N474 314 aa17.99■□□□□ 0.47
DDX39A-212ENST00000590260 PRELID2Q8N945 189 aa17.99■□□□□ 0.47
DDX39A-212ENST00000590260 DDHD1Q8NEL9 900 aa17.99■□□□□ 0.47
DDX39A-212ENST00000590260 OR6C4Q8NGE1 309 aa17.99■□□□□ 0.47
DDX39A-212ENST00000590260 SLC37A2Q8TED4 501 aa17.99■□□□□ 0.47
DDX39A-212ENST00000590260 LRRC40Q9H9A6 602 aa17.99■□□□□ 0.47
DDX39A-212ENST00000590260 SMOXQ9NWM0 555 aa17.99■□□□□ 0.47
DDX39A-212ENST00000590260 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.99■□□□□ 0.47
DDX39A-212ENST00000590260 SCHIP1Q9P0W5 487 aaPredicted RBP17.99■□□□□ 0.47
DDX39A-212ENST00000590260 ZNF148Q9UQR1 794 aa17.99■□□□□ 0.47
DDX39A-212ENST00000590260 AGAP14A8MT82 685 aa17.98■□□□□ 0.47
DDX39A-212ENST00000590260 D6RAR5 112 aa17.98■□□□□ 0.47
DDX39A-212ENST00000590260 TLX3O43711 291 aaPredicted RBP17.98■□□□□ 0.47
DDX39A-212ENST00000590260 SGTAO43765 313 aa17.98■□□□□ 0.47
DDX39A-212ENST00000590260 CEP104O60308 925 aa17.98■□□□□ 0.47
DDX39A-212ENST00000590260 PPFIA2O75334 1257 aa17.98■□□□□ 0.47
DDX39A-212ENST00000590260 KRT37O76014 449 aa17.98■□□□□ 0.47
DDX39A-212ENST00000590260 PRSS56P0CW18 603 aa17.98■□□□□ 0.47
DDX39A-212ENST00000590260 RPL22P35268 128 aaKnown RBP17.98■□□□□ 0.47
DDX39A-212ENST00000590260 TNNT3P45378 269 aaPredicted RBP17.98■□□□□ 0.47
DDX39A-212ENST00000590260 KCNJ1P48048 391 aa17.98■□□□□ 0.47
DDX39A-212ENST00000590260 CLCNKAP51800 687 aa17.98■□□□□ 0.47
DDX39A-212ENST00000590260 OR1D5P58170 312 aa17.98■□□□□ 0.47
DDX39A-212ENST00000590260 TMPRSS15P98073 1019 aa17.98■□□□□ 0.47
DDX39A-212ENST00000590260 CFHR1Q03591 330 aa17.98■□□□□ 0.47
DDX39A-212ENST00000590260 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.98■□□□□ 0.47
DDX39A-212ENST00000590260 SLC35F6Q8N357 371 aa17.98■□□□□ 0.47
DDX39A-212ENST00000590260 RASGEF1CQ8N431 466 aa17.98■□□□□ 0.47
DDX39A-212ENST00000590260 RASGEF1AQ8N9B8 481 aa17.98■□□□□ 0.47
DDX39A-212ENST00000590260 MS4A14Q96JA4 679 aa17.98■□□□□ 0.47
DDX39A-212ENST00000590260 PPP1R2P1Q96PQ5 205 aa17.98■□□□□ 0.47
DDX39A-212ENST00000590260 PRDM8Q9NQV8 689 aa17.98■□□□□ 0.47
DDX39A-212ENST00000590260 KLC4Q9NSK0 619 aa17.98■□□□□ 0.47
DDX39A-212ENST00000590260 SMARCAL1Q9NZC9 954 aa17.98■□□□□ 0.47
DDX39A-212ENST00000590260 PKP3Q9Y446 797 aa17.98■□□□□ 0.47
DDX39A-212ENST00000590260 LAMA5O15230 3695 aa17.98■□□□□ 0.47
DDX39A-212ENST00000590260 C2orf81A6NN90 581 aa17.97■□□□□ 0.47
DDX39A-212ENST00000590260 GPR89AB7ZAQ6 455 aa17.97■□□□□ 0.47
DDX39A-212ENST00000590260 VEGFDO43915 354 aa17.97■□□□□ 0.47
DDX39A-212ENST00000590260 BRINP1O60477 761 aa17.97■□□□□ 0.47
DDX39A-212ENST00000590260 SUN1O94901 812 aa17.97■□□□□ 0.47
DDX39A-212ENST00000590260 CDK14O94921 469 aa17.97■□□□□ 0.47
DDX39A-212ENST00000590260 PRAMEF1O95521 474 aa17.97■□□□□ 0.47
DDX39A-212ENST00000590260 IFNB1P01574 187 aa17.97■□□□□ 0.47
DDX39A-212ENST00000590260 MPOP05164 745 aa17.97■□□□□ 0.47
DDX39A-212ENST00000590260 GPR89BP0CG08 455 aa17.97■□□□□ 0.47
DDX39A-212ENST00000590260 CDKN1CP49918 316 aaPredicted RBP17.97■□□□□ 0.47
DDX39A-212ENST00000590260 SEMA5AQ13591 1074 aa17.97■□□□□ 0.47
DDX39A-212ENST00000590260 SPIDRQ14159 915 aa17.97■□□□□ 0.47
DDX39A-212ENST00000590260 KIF26BQ2KJY2 2108 aa17.97■□□□□ 0.47
DDX39A-212ENST00000590260 ZDHHC20Q5W0Z9 365 aa17.97■□□□□ 0.47
DDX39A-212ENST00000590260 IYDQ6PHW0 289 aa17.97■□□□□ 0.47
DDX39A-212ENST00000590260 ZNF574Q6ZN55 896 aaPredicted RBP17.97■□□□□ 0.47
DDX39A-212ENST00000590260 LRRTM4Q86VH4 590 aa17.97■□□□□ 0.47
DDX39A-212ENST00000590260 ZNF761Q86XN6 746 aaPredicted RBP17.97■□□□□ 0.47
DDX39A-212ENST00000590260 OR52K1Q8NGK4 314 aa17.97■□□□□ 0.47
DDX39A-212ENST00000590260 ZNF398Q8TD17 642 aa17.97■□□□□ 0.47
DDX39A-212ENST00000590260 NXPE2Q96DL1 559 aa17.97■□□□□ 0.47
DDX39A-212ENST00000590260 DNAJC1Q96KC8 554 aaKnown RBP17.97■□□□□ 0.47
DDX39A-212ENST00000590260 GFM1Q96RP9 751 aaKnown RBP17.97■□□□□ 0.47
DDX39A-212ENST00000590260 FOXP3Q9BZS1 431 aa17.97■□□□□ 0.47
DDX39A-212ENST00000590260 SYNDIG1Q9H7V2 258 aa17.97■□□□□ 0.47
DDX39A-212ENST00000590260 TRMT1Q9NXH9 659 aaKnown RBP17.97■□□□□ 0.47
DDX39A-212ENST00000590260 DRG1Q9Y295 367 aaKnown RBP17.97■□□□□ 0.47
DDX39A-212ENST00000590260 RAXQ9Y2V3 346 aa17.97■□□□□ 0.47
DDX39A-212ENST00000590260 NRDCO43847 1150 aa17.96■□□□□ 0.47
DDX39A-212ENST00000590260 SRP72O76094 671 aaKnown RBP17.96■□□□□ 0.47
DDX39A-212ENST00000590260 BRAFP15056 766 aa17.96■□□□□ 0.47
DDX39A-212ENST00000590260 ZNF7P17097 686 aaPredicted RBP17.96■□□□□ 0.47
DDX39A-212ENST00000590260 PSMA3P25788 255 aa17.96■□□□□ 0.47
DDX39A-212ENST00000590260 CD1CP29017 333 aa17.96■□□□□ 0.47
DDX39A-212ENST00000590260 FASLGP48023 281 aa17.96■□□□□ 0.47
DDX39A-212ENST00000590260 POU6F1Q14863 301 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms