RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 WASHC5Q12768 1159 aa17.78■□□□□ 0.44
H3F3B-209ENST00000589949 TBX2Q13207 712 aaPredicted RBP17.78■□□□□ 0.44
H3F3B-209ENST00000589949 CLCA4Q14CN2 919 aa17.78■□□□□ 0.44
H3F3B-209ENST00000589949 TCEAL1Q15170 157 aa17.78■□□□□ 0.44
H3F3B-209ENST00000589949 PLA2G4EQ3MJ16 856 aa17.78■□□□□ 0.44
H3F3B-209ENST00000589949 TEX44Q53QW1 395 aa17.78■□□□□ 0.44
H3F3B-209ENST00000589949 RHOT2Q8IXI1 618 aa17.78■□□□□ 0.44
H3F3B-209ENST00000589949 RHOT1Q8IXI2 618 aa17.78■□□□□ 0.44
H3F3B-209ENST00000589949 RNF214Q8ND24 703 aa17.78■□□□□ 0.44
H3F3B-209ENST00000589949 NCSTNQ92542 709 aa17.78■□□□□ 0.44
H3F3B-209ENST00000589949 GLYATL1Q969I3 302 aa17.78■□□□□ 0.44
H3F3B-209ENST00000589949 AHCYL2Q96HN2 611 aaKnown RBP17.78■□□□□ 0.44
H3F3B-209ENST00000589949 TEKT5Q96M29 485 aa17.78■□□□□ 0.44
H3F3B-209ENST00000589949 PLEKHG4BQ96PX9 1271 aa17.78■□□□□ 0.44
H3F3B-209ENST00000589949 DPYSL5Q9BPU6 564 aa17.78■□□□□ 0.44
H3F3B-209ENST00000589949 MAK16Q9BXY0 300 aaKnown RBP17.78■□□□□ 0.44
H3F3B-209ENST00000589949 TRIM39Q9HCM9 518 aa17.78■□□□□ 0.44
H3F3B-209ENST00000589949 APMAPQ9HDC9 416 aa17.78■□□□□ 0.44
H3F3B-209ENST00000589949 KLC4Q9NSK0 619 aa17.78■□□□□ 0.44
H3F3B-209ENST00000589949 OGFRQ9NZT2 677 aa17.78■□□□□ 0.44
H3F3B-209ENST00000589949 NFKBIL1Q9UBC1 381 aaPredicted RBP17.78■□□□□ 0.44
H3F3B-209ENST00000589949 CPNE7Q9UBL6 633 aa17.78■□□□□ 0.44
H3F3B-209ENST00000589949 TFR2Q9UP52 801 aa17.78■□□□□ 0.44
H3F3B-209ENST00000589949 PPP1R12AO14974 1030 aaPredicted RBP17.77■□□□□ 0.44
H3F3B-209ENST00000589949 DUX1O43812 170 aa17.77■□□□□ 0.44
H3F3B-209ENST00000589949 NDST3O95803 873 aa17.77■□□□□ 0.44
H3F3B-209ENST00000589949 LIFP15018 202 aa17.77■□□□□ 0.44
H3F3B-209ENST00000589949 MAPK9P45984 424 aa17.77■□□□□ 0.44
H3F3B-209ENST00000589949 CLCNKAP51800 687 aa17.77■□□□□ 0.44
H3F3B-209ENST00000589949 NFKB2Q00653 900 aa17.77■□□□□ 0.44
H3F3B-209ENST00000589949 NFATC3Q12968 1075 aa17.77■□□□□ 0.44
H3F3B-209ENST00000589949 ZNF569Q5MCW4 686 aa17.77■□□□□ 0.44
H3F3B-209ENST00000589949 KDELC1Q6UW63 502 aa17.77■□□□□ 0.44
H3F3B-209ENST00000589949 TRAM1L1Q8N609 369 aa17.77■□□□□ 0.44
H3F3B-209ENST00000589949 HERPUD2Q9BSE4 406 aa17.77■□□□□ 0.44
H3F3B-209ENST00000589949 GPR63Q9BZJ6 419 aa17.77■□□□□ 0.44
H3F3B-209ENST00000589949 BPIFA1Q9NP55 256 aa17.77■□□□□ 0.44
H3F3B-209ENST00000589949 ZNF624Q9P2J8 865 aaPredicted RBP17.77■□□□□ 0.44
H3F3B-209ENST00000589949 SLC30A1Q9Y6M5 507 aa17.77■□□□□ 0.44
H3F3B-209ENST00000589949 FLNBO75369 2602 aaKnown RBP17.77■□□□□ 0.43
H3F3B-209ENST00000589949 F5H423 210 aaPredicted RBP17.76■□□□□ 0.43
H3F3B-209ENST00000589949 BRAFP15056 766 aa17.76■□□□□ 0.43
H3F3B-209ENST00000589949 ZFXP17010 805 aaPredicted RBP17.76■□□□□ 0.43
H3F3B-209ENST00000589949 SLC19A1P41440 591 aa17.76■□□□□ 0.43
H3F3B-209ENST00000589949 CHRNA4P43681 627 aa17.76■□□□□ 0.43
H3F3B-209ENST00000589949 MARCKSL1P49006 195 aa17.76■□□□□ 0.43
H3F3B-209ENST00000589949 GFERP55789 205 aa17.76■□□□□ 0.43
H3F3B-209ENST00000589949 MC2RQ01718 297 aa17.76■□□□□ 0.43
H3F3B-209ENST00000589949 SLC14A2Q15849 920 aa17.76■□□□□ 0.43
H3F3B-209ENST00000589949 TIPARPQ7Z3E1 657 aaKnown RBP17.76■□□□□ 0.43
H3F3B-209ENST00000589949 SLC9B2Q86UD5 537 aa17.76■□□□□ 0.43
H3F3B-209ENST00000589949 RTP4Q96DX8 246 aa17.76■□□□□ 0.43
H3F3B-209ENST00000589949 RNF31Q96EP0 1072 aa17.76■□□□□ 0.43
H3F3B-209ENST00000589949 ZSCAN5AQ9BUG6 496 aa17.76■□□□□ 0.43
H3F3B-209ENST00000589949 OSGEPL1Q9H4B0 414 aa17.76■□□□□ 0.43
H3F3B-209ENST00000589949 STARD5Q9NSY2 213 aa17.76■□□□□ 0.43
H3F3B-209ENST00000589949 DDX56Q9NY93 547 aaKnown RBP17.76■□□□□ 0.43
H3F3B-209ENST00000589949 KLHL3Q9UH77 587 aa17.76■□□□□ 0.43
H3F3B-209ENST00000589949 PILRAQ9UKJ1 303 aa17.76■□□□□ 0.43
H3F3B-209ENST00000589949 A0A0A6YYK5 440 aaPredicted RBP17.75■□□□□ 0.43
H3F3B-209ENST00000589949 KIR2DS5A0A0G2JLQ3 304 aa17.75■□□□□ 0.43
H3F3B-209ENST00000589949 A0A0G2JNG1 304 aa17.75■□□□□ 0.43
H3F3B-209ENST00000589949 LOC285095A0A1B0GVY8 99 aa17.75■□□□□ 0.43
H3F3B-209ENST00000589949 KIR2DS3K7RE56 304 aa17.75■□□□□ 0.43
H3F3B-209ENST00000589949 GPR39O43194 453 aa17.75■□□□□ 0.43
H3F3B-209ENST00000589949 RAD1O60671 282 aa17.75■□□□□ 0.43
H3F3B-209ENST00000589949 CST8O60676 142 aa17.75■□□□□ 0.43
H3F3B-209ENST00000589949 ZNF7P17097 686 aaPredicted RBP17.75■□□□□ 0.43
H3F3B-209ENST00000589949 NFKB1P19838 968 aa17.75■□□□□ 0.43
H3F3B-209ENST00000589949 SLC1A1P43005 524 aa17.75■□□□□ 0.43
H3F3B-209ENST00000589949 PPM1FP49593 454 aaPredicted RBP17.75■□□□□ 0.43
H3F3B-209ENST00000589949 EPHA4P54764 986 aa17.75■□□□□ 0.43
H3F3B-209ENST00000589949 KIR2DS5Q14953 304 aa17.75■□□□□ 0.43
H3F3B-209ENST00000589949 ATP13A5Q4VNC0 1218 aa17.75■□□□□ 0.43
H3F3B-209ENST00000589949 DCAF12Q5T6F0 453 aa17.75■□□□□ 0.43
H3F3B-209ENST00000589949 KAZNQ674X7 775 aa17.75■□□□□ 0.43
H3F3B-209ENST00000589949 SPOCD1Q6ZMY3 1216 aa17.75■□□□□ 0.43
H3F3B-209ENST00000589949 C11orf96Q7Z7L8 435 aa17.75■□□□□ 0.43
H3F3B-209ENST00000589949 PHYKPLQ8IUZ5 450 aa17.75■□□□□ 0.43
H3F3B-209ENST00000589949 CACNA2D3Q8IZS8 1091 aa17.75■□□□□ 0.43
H3F3B-209ENST00000589949 TTC30BQ8N4P2 665 aa17.75■□□□□ 0.43
H3F3B-209ENST00000589949 OXNAD1Q96HP4 312 aaPredicted RBP17.75■□□□□ 0.43
H3F3B-209ENST00000589949 ZMYND15Q9H091 742 aa17.75■□□□□ 0.43
H3F3B-209ENST00000589949 TSPY26PQ9H489 355 aa17.75■□□□□ 0.43
H3F3B-209ENST00000589949 INTUQ9ULD6 942 aa17.75■□□□□ 0.43
H3F3B-209ENST00000589949 DNAJC16Q9Y2G8 782 aa17.75■□□□□ 0.43
H3F3B-209ENST00000589949 ALG6Q9Y672 507 aa17.75■□□□□ 0.43
H3F3B-209ENST00000589949 SPOPO43791 374 aa17.74■□□□□ 0.43
H3F3B-209ENST00000589949 SLC28A2O43868 658 aa17.74■□□□□ 0.43
H3F3B-209ENST00000589949 XRCC1P18887 633 aaPredicted RBP17.74■□□□□ 0.43
H3F3B-209ENST00000589949 WNT3AP56704 352 aa17.74■□□□□ 0.43
H3F3B-209ENST00000589949 SEPT7Q16181 437 aaKnown RBP17.74■□□□□ 0.43
H3F3B-209ENST00000589949 SIRPB2Q5JXA9 342 aa17.74■□□□□ 0.43
H3F3B-209ENST00000589949 ZC3H18Q86VM9 953 aaKnown RBP17.74■□□□□ 0.43
H3F3B-209ENST00000589949 UNC5BQ8IZJ1 945 aa17.74■□□□□ 0.43
H3F3B-209ENST00000589949 IL22RA1Q8N6P7 574 aa17.74■□□□□ 0.43
H3F3B-209ENST00000589949 CCDC112Q8NEF3 446 aa17.74■□□□□ 0.43
H3F3B-209ENST00000589949 TFB1MQ8WVM0 346 aaKnown RBP17.74■□□□□ 0.43
H3F3B-209ENST00000589949 SH3KBP1Q96B97 665 aa17.74■□□□□ 0.43
H3F3B-209ENST00000589949 MRGPRX2Q96LB1 330 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms