RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 EPB42P16452 691 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 PSMB4P28070 264 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 CHRNA4P43681 627 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 E2F1Q01094 437 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 NR0B2Q15466 257 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 SLC1A5Q15758 541 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 ALS2CLQ60I27 953 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 TMC3Q7Z5M5 1100 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 TAF8Q7Z7C8 310 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 TRIM74Q86UV6 250 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 SLC13A5Q86YT5 568 aaPredicted RBP10.3□□□□□ -0.76
SDF2-208ENST00000589788 FAM71DQ8N9W8 422 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 AGAP2Q99490 1192 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 NAPGQ99747 312 aaPredicted RBP10.3□□□□□ -0.76
SDF2-208ENST00000589788 FICDQ9BVA6 458 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 SPATA16Q9BXB7 569 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 FRMD8Q9BZ67 464 aaPredicted RBP10.3□□□□□ -0.76
SDF2-208ENST00000589788 FRMD8P1Q9BZ68 369 aaPredicted RBP10.3□□□□□ -0.76
SDF2-208ENST00000589788 TMEM168Q9H0V1 697 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 TRABDQ9H4I3 376 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 HACD3Q9P035 362 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 SIRPGQ9P1W8 387 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 GMPR2Q9P2T1 348 aaKnown RBP10.3□□□□□ -0.76
SDF2-208ENST00000589788 GULP1Q9UBP9 304 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 GPR34Q9UPC5 381 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 SPO11Q9Y5K1 396 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 CPED1A4D0V7 1026 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 C5orf60A6NFR6 353 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 CEACAM5P06731 702 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 CASQ1P31415 396 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 ACTN2P35609 894 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 GNPDA1P46926 289 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 POLD2P49005 469 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 ILF3Q12906 894 aaKnown RBP eCLIP10.29□□□□□ -0.76
SDF2-208ENST00000589788 DBN1Q16643 649 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 P3H1Q32P28 736 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 HENMT1Q5T8I9 393 aaKnown RBP10.29□□□□□ -0.76
SDF2-208ENST00000589788 KCTD16Q68DU8 428 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 RIPOR1Q6ZS17 1223 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 MARK2Q7KZI7 788 aaKnown RBP10.29□□□□□ -0.76
SDF2-208ENST00000589788 TMPRSS7Q7RTY8 843 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 GLT6D1Q7Z4J2 308 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 ZNF438Q7Z4V0 828 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 FAM46DQ8NEK8 389 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 SLC35B2Q8TB61 432 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 IFI44Q8TCB0 444 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 BLOC1S5Q8TDH9 187 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 ATG4AQ8WYN0 398 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 EID2BQ96D98 161 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 TMEM121Q9BTD3 319 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 ZSCAN5AQ9BUG6 496 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 BOCQ9BWV1 1114 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 TLR10Q9BXR5 811 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 GSDMCQ9BYG8 508 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 ABCG4Q9H172 646 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 SUFUQ9UMX1 484 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 ZNF148Q9UQR1 794 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 SLC17A4Q9Y2C5 497 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 TMEM98Q9Y2Y6 226 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 MSRB2Q9Y3D2 182 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 PKP3Q9Y446 797 aa10.29□□□□□ -0.76
SDF2-208ENST00000589788 FADS2P1A8MWK0 482 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 AURKAO14965 403 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 ATXN7O15265 892 aaPredicted RBP10.28□□□□□ -0.76
SDF2-208ENST00000589788 LIASO43766 372 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 SLC25A14O95258 325 aaPredicted RBP10.28□□□□□ -0.76
SDF2-208ENST00000589788 AGTP01019 485 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 ATP1A1P05023 1023 aaKnown RBP10.28□□□□□ -0.76
SDF2-208ENST00000589788 GP1BAP07359 652 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 IVLP07476 585 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 JUPP14923 745 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 STIP1P31948 543 aaKnown RBP10.28□□□□□ -0.76
SDF2-208ENST00000589788 HMGCLP35914 325 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 DCDC1P59894 354 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 SNX1Q13596 522 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 PEX6Q13608 980 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 SMAD1Q15797 465 aaKnown RBP10.28□□□□□ -0.76
SDF2-208ENST00000589788 PARP6Q2NL67 630 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 ZDHHC20Q5W0Z9 365 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 PAPD7Q5XG87 772 aaKnown RBP10.28□□□□□ -0.76
SDF2-208ENST00000589788 EFL1Q7Z2Z2 1120 aaKnown RBP10.28□□□□□ -0.76
SDF2-208ENST00000589788 TMPRSS12Q86WS5 348 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 GALNT13Q8IUC8 556 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 SLC35F3Q8IY50 421 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 ARL10Q8N8L6 244 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 KYQ8NBH2 561 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 GPR26Q8NDV2 337 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 KIF18AQ8NI77 898 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 MAIP1Q8WWC4 291 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 C1orf54Q8WWF1 131 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 NAT6Q93015 286 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 COX14Q96I36 57 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 CNTNAP3BQ96NU0 1288 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 OR2M4Q96R27 311 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 TBL1YQ9BQ87 522 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 APOL2Q9BQE5 337 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 GORASP1Q9BQQ3 440 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 CNTNAP3Q9BZ76 1288 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 DPEP2Q9H4A9 486 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 BPIFA1Q9NP55 256 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms