RNA–Protein interactions for RNA: ENST00000588961.1

KDM4B-207, Transcript of lysine demethylase 4B, humanhuman

TSL 4

Gene KDM4B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-207ENST00000588961 SORT1Q99523 831 aa8.67□□□□□ -1.02
KDM4B-207ENST00000588961 TRIM56Q9BRZ2 755 aaKnown RBP8.67□□□□□ -1.02
KDM4B-207ENST00000588961 C2orf49Q9BVC5 232 aaPredicted RBP8.67□□□□□ -1.02
KDM4B-207ENST00000588961 ADGRE3Q9BY15 652 aa8.67□□□□□ -1.02
KDM4B-207ENST00000588961 CD248Q9HCU0 757 aa8.67□□□□□ -1.02
KDM4B-207ENST00000588961 NT5MQ9NPB1 228 aa8.67□□□□□ -1.02
KDM4B-207ENST00000588961 PRSS16Q9NQE7 514 aa8.67□□□□□ -1.02
KDM4B-207ENST00000588961 ZSCAN32Q9NX65 697 aa8.67□□□□□ -1.02
KDM4B-207ENST00000588961 NOP53Q9NZM5 478 aaKnown RBP8.67□□□□□ -1.02
KDM4B-207ENST00000588961 SUN2Q9UH99 717 aa8.67□□□□□ -1.02
KDM4B-207ENST00000588961 SLC25A13Q9UJS0 675 aa8.67□□□□□ -1.02
KDM4B-207ENST00000588961 SLC39A10Q9ULF5 831 aa8.67□□□□□ -1.02
KDM4B-207ENST00000588961 RUVBL2Q9Y230 463 aaKnown RBP8.67□□□□□ -1.02
KDM4B-207ENST00000588961 ZDBF2Q9HCK1 2354 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 MUC22E2RYF6 1773 aaPredicted RBP8.66□□□□□ -1.02
KDM4B-207ENST00000588961 H7C0S8 307 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 J3KR12 359 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 SMAD6O43541 496 aaKnown RBP8.66□□□□□ -1.02
KDM4B-207ENST00000588961 BNIP3LO60238 219 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 RPP40O75818 363 aaKnown RBP8.66□□□□□ -1.02
KDM4B-207ENST00000588961 ZMPSTE24O75844 475 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 WISP3O95389 354 aaPredicted RBP8.66□□□□□ -1.02
KDM4B-207ENST00000588961 HSPA4LO95757 839 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 S1PR4O95977 384 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 LTA4HP09960 611 aaKnown RBP8.66□□□□□ -1.02
KDM4B-207ENST00000588961 ATXN1LP0C7T5 689 aaKnown RBP8.66□□□□□ -1.02
KDM4B-207ENST00000588961 THRAP10827 490 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 SRCP12931 536 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 PCSK2P16519 638 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 NDUFV2P19404 249 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 HOXA6P31267 233 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 PPARGP37231 505 aaPredicted RBP8.66□□□□□ -1.02
KDM4B-207ENST00000588961 NNMTP40261 264 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 CD86P42081 329 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 COPAP53621 1224 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 PRAMEP78395 509 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 ARF5P84085 180 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 NFKB2Q00653 900 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 ITKQ08881 620 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 CAMK2GQ13555 558 aaPredicted RBP8.66□□□□□ -1.02
KDM4B-207ENST00000588961 ITGA9Q13797 1035 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 RCN2Q14257 317 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 POU6F1Q14863 301 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 HERC3Q15034 1050 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 TAF1AQ15573 450 aaPredicted RBP8.66□□□□□ -1.02
KDM4B-207ENST00000588961 DLG2Q15700 870 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 TRMT5Q32P41 509 aaKnown RBP8.66□□□□□ -1.02
KDM4B-207ENST00000588961 HNRNPA1L2Q32P51 320 aaKnown RBP8.66□□□□□ -1.02
KDM4B-207ENST00000588961 PPM1JQ5JR12 505 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 SIRPB2Q5JXA9 342 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 C9orf64Q5T6V5 341 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 LRRC8EQ6NSJ5 796 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 AAGABQ6PD74 315 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 KIAA1324Q6UXG2 1013 aaKnown RBP8.66□□□□□ -1.02
KDM4B-207ENST00000588961 NET1Q7Z628 596 aaPredicted RBP8.66□□□□□ -1.02
KDM4B-207ENST00000588961 LAPTM4BQ86VI4 370 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 STK40Q8N2I9 435 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 FSTL5Q8N475 847 aaPredicted RBP8.66□□□□□ -1.02
KDM4B-207ENST00000588961 TEX9Q8N6V9 391 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 FRMD1Q8N878 549 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 DCAF4L2Q8NA75 395 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 ZBTB44Q8NCP5 570 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 FAM13CQ8NE31 585 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 FRS2Q8WU20 508 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 MCUR1Q96AQ8 359 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 KCTD12Q96CX2 325 aaKnown RBP8.66□□□□□ -1.02
KDM4B-207ENST00000588961 MRGPRX1Q96LB2 322 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 RILPQ96NA2 401 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 TRIB3Q96RU7 358 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 OMDQ99983 421 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 SEMA3CQ99985 751 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 MECRQ9BV79 373 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 GATA5Q9BWX5 397 aaPredicted RBP8.66□□□□□ -1.02
KDM4B-207ENST00000588961 FAM126AQ9BYI3 521 aaPredicted RBP8.66□□□□□ -1.02
KDM4B-207ENST00000588961 C20orf27Q9GZN8 174 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 NMUR2Q9GZQ4 415 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 MKRN2Q9H000 416 aaKnown RBP8.66□□□□□ -1.02
KDM4B-207ENST00000588961 TNKS2Q9H2K2 1166 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 C12orf65Q9H3J6 166 aaKnown RBP8.66□□□□□ -1.02
KDM4B-207ENST00000588961 RNPEPL1Q9HAU8 725 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 CD93Q9NPY3 652 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 NLE1Q9NVX2 485 aaPredicted RBP8.66□□□□□ -1.02
KDM4B-207ENST00000588961 TMEM45AQ9NWC5 275 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 UBP1Q9NZI7 540 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 UBA2Q9UBT2 640 aaPredicted RBP8.66□□□□□ -1.02
KDM4B-207ENST00000588961 EBF1Q9UH73 591 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 BCAP29Q9UHQ4 241 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 BAIAP2L1Q9UHR4 511 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 DNAJC16Q9Y2G8 782 aa8.66□□□□□ -1.02
KDM4B-207ENST00000588961 CACNA1IQ9P0X4 2223 aa8.65□□□□□ -1.02
KDM4B-207ENST00000588961 SHROOM3Q8TF72 1996 aa8.65□□□□□ -1.02
KDM4B-207ENST00000588961 EDDM13A0A1B0GTR0 161 aa8.65□□□□□ -1.02
KDM4B-207ENST00000588961 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.65□□□□□ -1.02
KDM4B-207ENST00000588961 A0A1W2PQ67 120 aa8.65□□□□□ -1.02
KDM4B-207ENST00000588961 RGSL1A5PLK6 1076 aa8.65□□□□□ -1.02
KDM4B-207ENST00000588961 C2orf81A6NN90 581 aa8.65□□□□□ -1.02
KDM4B-207ENST00000588961 B2RBV5 119 aa8.65□□□□□ -1.02
KDM4B-207ENST00000588961 INSIG1O15503 277 aa8.65□□□□□ -1.02
KDM4B-207ENST00000588961 LILRB5O75023 590 aa8.65□□□□□ -1.02
KDM4B-207ENST00000588961 TM7SF2O76062 418 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms