RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 CTSL3PQ5NE16 218 aa30.74■■■□□ 2.51
CAPNS1-206ENST00000588815 GPRC6AQ5T6X5 926 aa30.74■■■□□ 2.51
CAPNS1-206ENST00000588815 HHATQ5VTY9 493 aa30.74■■■□□ 2.51
CAPNS1-206ENST00000588815 LVRNQ6Q4G3 990 aa30.74■■■□□ 2.51
CAPNS1-206ENST00000588815 MACC1Q6ZN28 852 aa30.74■■■□□ 2.51
CAPNS1-206ENST00000588815 CDHR3Q6ZTQ4 885 aa30.74■■■□□ 2.51
CAPNS1-206ENST00000588815 OR14C36Q8NHC7 312 aa30.74■■■□□ 2.51
CAPNS1-206ENST00000588815 DYDC1Q8WWB3 177 aa30.74■■■□□ 2.51
CAPNS1-206ENST00000588815 COQ6Q9Y2Z9 468 aa30.74■■■□□ 2.51
CAPNS1-206ENST00000588815 FAM170BA6NMN3 283 aa30.73■■■□□ 2.51
CAPNS1-206ENST00000588815 QSOX1O00391 747 aa30.73■■■□□ 2.51
CAPNS1-206ENST00000588815 KLHL2O95198 593 aa30.73■■■□□ 2.51
CAPNS1-206ENST00000588815 ADPRHP54922 357 aa30.73■■■□□ 2.51
CAPNS1-206ENST00000588815 PDAP1Q13442 181 aaKnown RBP30.73■■■□□ 2.51
CAPNS1-206ENST00000588815 PTRHD1Q6GMV3 140 aaKnown RBP30.73■■■□□ 2.51
CAPNS1-206ENST00000588815 GLYATL1Q969I3 302 aa30.73■■■□□ 2.51
CAPNS1-206ENST00000588815 C1QTNF1Q9BXJ1 281 aa30.73■■■□□ 2.51
CAPNS1-206ENST00000588815 SLC6A17Q9H1V8 727 aa30.73■■■□□ 2.51
CAPNS1-206ENST00000588815 SLC17A7Q9P2U7 560 aa30.73■■■□□ 2.51
CAPNS1-206ENST00000588815 TMPRSS11EQ9UL52 423 aa30.73■■■□□ 2.51
CAPNS1-206ENST00000588815 FADS2P1A8MWK0 482 aa30.72■■■□□ 2.51
CAPNS1-206ENST00000588815 E5RI56 91 aa30.72■■■□□ 2.51
CAPNS1-206ENST00000588815 APOA4P06727 396 aa30.72■■■□□ 2.51
CAPNS1-206ENST00000588815 DHRS4L1P0CG22 281 aa30.72■■■□□ 2.51
CAPNS1-206ENST00000588815 CA5AP35218 305 aa30.72■■■□□ 2.51
CAPNS1-206ENST00000588815 WDR4P57081 412 aaKnown RBP30.72■■■□□ 2.51
CAPNS1-206ENST00000588815 KIAA1324Q6UXG2 1013 aaKnown RBP30.72■■■□□ 2.51
CAPNS1-206ENST00000588815 MGARPQ8TDB4 240 aa30.72■■■□□ 2.51
CAPNS1-206ENST00000588815 DCUN1D1Q96GG9 259 aa30.72■■■□□ 2.51
CAPNS1-206ENST00000588815 UBXN10Q96LJ8 280 aa30.72■■■□□ 2.51
CAPNS1-206ENST00000588815 FAM111AQ96PZ2 611 aa30.72■■■□□ 2.51
CAPNS1-206ENST00000588815 ASB2Q96Q27 587 aa30.72■■■□□ 2.51
CAPNS1-206ENST00000588815 CCDC134Q9H6E4 229 aa30.72■■■□□ 2.51
CAPNS1-206ENST00000588815 OAS3Q9Y6K5 1087 aaKnown RBP30.72■■■□□ 2.51
CAPNS1-206ENST00000588815 AP2A2O94973 939 aa30.71■■■□□ 2.51
CAPNS1-206ENST00000588815 TIAL1Q01085 375 aaKnown RBP eCLIP30.71■■■□□ 2.51
CAPNS1-206ENST00000588815 FAM83EQ2M2I3 478 aa30.71■■■□□ 2.51
CAPNS1-206ENST00000588815 N4BP2L1Q5TBK1 243 aaPredicted RBP30.71■■■□□ 2.51
CAPNS1-206ENST00000588815 PHYKPLQ8IUZ5 450 aa30.71■■■□□ 2.51
CAPNS1-206ENST00000588815 ASB12Q8WXK4 309 aa30.71■■■□□ 2.51
CAPNS1-206ENST00000588815 PANX3Q96QZ0 392 aa30.71■■■□□ 2.51
CAPNS1-206ENST00000588815 BOCQ9BWV1 1114 aa30.71■■■□□ 2.51
CAPNS1-206ENST00000588815 C1QTNF7Q9BXJ2 289 aa30.71■■■□□ 2.51
CAPNS1-206ENST00000588815 MID2Q9UJV3 735 aa30.71■■■□□ 2.51
CAPNS1-206ENST00000588815 MED16Q9Y2X0 877 aa30.71■■■□□ 2.51
CAPNS1-206ENST00000588815 MTF2Q9Y483 593 aaPredicted RBP30.71■■■□□ 2.51
CAPNS1-206ENST00000588815 IGLON5A6NGN9 336 aa30.7■■■□□ 2.51
CAPNS1-206ENST00000588815 SHOX2O60902 331 aaPredicted RBP30.7■■■□□ 2.51
CAPNS1-206ENST00000588815 ZNF37AP17032 561 aaPredicted RBP30.7■■■□□ 2.51
CAPNS1-206ENST00000588815 TEAD1P28347 426 aa30.7■■■□□ 2.51
CAPNS1-206ENST00000588815 GPR1P46091 355 aa30.7■■■□□ 2.51
CAPNS1-206ENST00000588815 AGAP9Q5VTM2 703 aa30.7■■■□□ 2.51
CAPNS1-206ENST00000588815 CENPLQ8N0S6 344 aaPredicted RBP30.7■■■□□ 2.51
CAPNS1-206ENST00000588815 GDAP1Q8TB36 358 aa30.7■■■□□ 2.51
CAPNS1-206ENST00000588815 C1QTNF2Q9BXJ5 285 aa30.7■■■□□ 2.51
CAPNS1-206ENST00000588815 ITM2CQ9NQX7 267 aa30.7■■■□□ 2.51
CAPNS1-206ENST00000588815 TRMT6Q9UJA5 497 aaKnown RBP30.7■■■□□ 2.51
CAPNS1-206ENST00000588815 SRRM3A6NNA2 597 aaPredicted RBP30.7■■■□□ 2.5
CAPNS1-206ENST00000588815 PLIN3O60664 434 aa30.7■■■□□ 2.5
CAPNS1-206ENST00000588815 IGLV3-19P01714 112 aa30.7■■■□□ 2.5
CAPNS1-206ENST00000588815 LTA4HP09960 611 aaKnown RBP30.7■■■□□ 2.5
CAPNS1-206ENST00000588815 OR56A5P0C7T3 313 aa30.7■■■□□ 2.5
CAPNS1-206ENST00000588815 IRF9Q00978 393 aa30.7■■■□□ 2.5
CAPNS1-206ENST00000588815 ZNF460Q14592 562 aa30.7■■■□□ 2.5
CAPNS1-206ENST00000588815 TMEM259Q4ZIN3 620 aa30.7■■■□□ 2.5
CAPNS1-206ENST00000588815 RAET1GQ6H3X3 334 aa30.7■■■□□ 2.5
CAPNS1-206ENST00000588815 KLC3Q6P597 504 aa30.7■■■□□ 2.5
CAPNS1-206ENST00000588815 HORMAD1Q86X24 394 aa30.7■■■□□ 2.5
CAPNS1-206ENST00000588815 PLD6Q8N2A8 252 aaKnown RBP30.7■■■□□ 2.5
CAPNS1-206ENST00000588815 ZCCHC2Q9C0B9 1178 aaKnown RBP30.7■■■□□ 2.5
CAPNS1-206ENST00000588815 TBC1D17Q9HA65 648 aa30.7■■■□□ 2.5
CAPNS1-206ENST00000588815 SGK2Q9HBY8 427 aa30.7■■■□□ 2.5
CAPNS1-206ENST00000588815 LATS2Q9NRM7 1088 aa30.7■■■□□ 2.5
CAPNS1-206ENST00000588815 PSD3Q9NYI0 1048 aa30.7■■■□□ 2.5
CAPNS1-206ENST00000588815 USP36Q9P275 1121 aaKnown RBP30.7■■■□□ 2.5
CAPNS1-206ENST00000588815 KLHL42Q9P2K6 505 aa30.7■■■□□ 2.5
CAPNS1-206ENST00000588815 NIPSNAP2O75323 286 aa30.69■■■□□ 2.5
CAPNS1-206ENST00000588815 SLC25A14O95258 325 aaPredicted RBP30.69■■■□□ 2.5
CAPNS1-206ENST00000588815 SOD1P00441 154 aa30.69■■■□□ 2.5
CAPNS1-206ENST00000588815 ATP1B2P14415 290 aaPredicted RBP30.69■■■□□ 2.5
CAPNS1-206ENST00000588815 CHRM3P20309 590 aa30.69■■■□□ 2.5
CAPNS1-206ENST00000588815 MSH3P20585 1137 aa30.69■■■□□ 2.5
CAPNS1-206ENST00000588815 AKT1P31749 480 aa30.69■■■□□ 2.5
CAPNS1-206ENST00000588815 TPMTP51580 245 aa30.69■■■□□ 2.5
CAPNS1-206ENST00000588815 LRRC14Q15048 493 aa30.69■■■□□ 2.5
CAPNS1-206ENST00000588815 TRIM67Q6ZTA4 783 aa30.69■■■□□ 2.5
CAPNS1-206ENST00000588815 GJD3Q8N144 294 aa30.69■■■□□ 2.5
CAPNS1-206ENST00000588815 NKAPQ8N5F7 415 aaKnown RBP30.69■■■□□ 2.5
CAPNS1-206ENST00000588815 HMGB4Q8WW32 186 aa30.69■■■□□ 2.5
CAPNS1-206ENST00000588815 CKAP2Q8WWK9 683 aa30.69■■■□□ 2.5
CAPNS1-206ENST00000588815 CLDN23Q96B33 292 aa30.69■■■□□ 2.5
CAPNS1-206ENST00000588815 GPR21Q99679 349 aa30.69■■■□□ 2.5
CAPNS1-206ENST00000588815 TSSK1BQ9BXA7 367 aa30.69■■■□□ 2.5
CAPNS1-206ENST00000588815 FOXQ1Q9C009 403 aa30.69■■■□□ 2.5
CAPNS1-206ENST00000588815 NMRAL1Q9HBL8 299 aa30.69■■■□□ 2.5
CAPNS1-206ENST00000588815 TMEM216Q9P0N5 145 aa30.69■■■□□ 2.5
CAPNS1-206ENST00000588815 RUVBL2Q9Y230 463 aaKnown RBP30.69■■■□□ 2.5
CAPNS1-206ENST00000588815 DHRS7Q9Y394 339 aa30.69■■■□□ 2.5
CAPNS1-206ENST00000588815 RNGTTO60942 597 aaKnown RBP30.68■■■□□ 2.5
CAPNS1-206ENST00000588815 RPS9P46781 194 aaKnown RBP30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms