RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 IGSF10Q6WRI0 2623 aa14.28□□□□□ -0.12
DDX39A-208ENST00000588692 KIR2DS5A0A0G2JLQ3 304 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 A0A0G2JNG1 304 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 PMS2P1A4D2B8 440 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 A6NCN8 305 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 OR5K4A6NMS3 321 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 F5H423 210 aaPredicted RBP14.27□□□□□ -0.12
DDX39A-208ENST00000588692 KIR2DS3K7RE56 304 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 KCNN4O15554 427 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 JMJD7P0C870 316 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 F3P13726 295 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 SPAM1P38567 509 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 GSDMDP57764 484 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 PRPSAP1Q14558 356 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 KIR2DS5Q14953 304 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 ANKRD20A2Q5SQ80 823 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.27□□□□□ -0.12
DDX39A-208ENST00000588692 PHF19Q5T6S3 580 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 ANKRD20A1Q5TYW2 823 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 ANKRD20A3Q5VUR7 823 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 DARS2Q6PI48 645 aaKnown RBP14.27□□□□□ -0.12
DDX39A-208ENST00000588692 LRRTM4Q86VH4 590 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 SLC25A41Q8N5S1 370 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 RNF10Q8N5U6 811 aaKnown RBP14.27□□□□□ -0.12
DDX39A-208ENST00000588692 BLOC1S5Q8TDH9 187 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 UBE2Q2Q8WVN8 375 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 SH3KBP1Q96B97 665 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 LRRC45Q96CN5 670 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 SPATA13Q96N96 652 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 PRORYQ9H606 182 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 RDH14Q9HBH5 336 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 BPIFA1Q9NP55 256 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 KCNK4Q9NYG8 393 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 IL17CQ9P0M4 197 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 TBC1D29Q9UFV1 150 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 ACSL6Q9UKU0 697 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 PKP3Q9Y446 797 aa14.27□□□□□ -0.12
DDX39A-208ENST00000588692 CACNA1GO43497 2377 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 IGHV1OR21-1A0A087WYE8 117 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 HGSO14964 777 aaPredicted RBP14.26□□□□□ -0.13
DDX39A-208ENST00000588692 KMOO15229 486 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 CD1CP29017 333 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 HHEXQ03014 270 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 TRA2AQ13595 282 aaKnown RBP eCLIP14.26□□□□□ -0.131e-6■□□□□ 10.9
DDX39A-208ENST00000588692 ITGA9Q13797 1035 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 GTF2H3Q13889 308 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 ATP13A5Q4VNC0 1218 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 AADACL2Q6P093 401 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 IYDQ6PHW0 289 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 TMPRSS9Q7Z410 1059 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 SLC9B2Q86UD5 537 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 OR4D9Q8NGE8 314 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 OR10G6Q8NH81 332 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 BRSK1Q8TDC3 778 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 CRELD1Q96HD1 420 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 NAF1Q96HR8 494 aaKnown RBP14.26□□□□□ -0.13
DDX39A-208ENST00000588692 SLC38A3Q99624 504 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 GORASP1Q9BQQ3 440 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 NUDT22Q9BRQ3 303 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 TIMM29Q9BSF4 260 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 FICDQ9BVA6 458 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.26□□□□□ -0.13
DDX39A-208ENST00000588692 TSGA10Q9BZW7 698 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 ZCCHC2Q9C0B9 1178 aaKnown RBP14.26□□□□□ -0.13
DDX39A-208ENST00000588692 C10orf88Q9H8K7 445 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 ARFGAP3Q9NP61 516 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 IL26Q9NPH9 171 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 TRIM10Q9UDY6 481 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 BPTFQ12830 3046 aa14.26□□□□□ -0.13
DDX39A-208ENST00000588692 GLYATL1P3A0A0U1RQE8 302 aa14.25□□□□□ -0.13
DDX39A-208ENST00000588692 KLK10O43240 276 aa14.25□□□□□ -0.13
DDX39A-208ENST00000588692 DUX1O43812 170 aa14.25□□□□□ -0.13
DDX39A-208ENST00000588692 CDK14O94921 469 aa14.25□□□□□ -0.13
DDX39A-208ENST00000588692 EML2O95834 649 aa14.25□□□□□ -0.13
DDX39A-208ENST00000588692 FTCDO95954 541 aa14.25□□□□□ -0.13
DDX39A-208ENST00000588692 ZNF7P17097 686 aaPredicted RBP14.25□□□□□ -0.13
DDX39A-208ENST00000588692 PSMB4P28070 264 aa14.25□□□□□ -0.13
DDX39A-208ENST00000588692 LIMK2P53671 638 aa14.25□□□□□ -0.13
DDX39A-208ENST00000588692 EPHA4P54764 986 aa14.25□□□□□ -0.13
DDX39A-208ENST00000588692 TMPRSS3P57727 454 aa14.25□□□□□ -0.13
DDX39A-208ENST00000588692 INSCQ1MX18 579 aa14.25□□□□□ -0.13
DDX39A-208ENST00000588692 LDLRAP1Q5SW96 308 aa14.25□□□□□ -0.13
DDX39A-208ENST00000588692 CRTC3Q6UUV7 619 aa14.25□□□□□ -0.13
DDX39A-208ENST00000588692 RANBP10Q6VN20 620 aa14.25□□□□□ -0.13
DDX39A-208ENST00000588692 USP53Q70EK8 1073 aa14.25□□□□□ -0.13
DDX39A-208ENST00000588692 HES6Q96HZ4 224 aa14.25□□□□□ -0.13
DDX39A-208ENST00000588692 TTC25Q96NG3 672 aa14.25□□□□□ -0.13
DDX39A-208ENST00000588692 FCRL3Q96P31 734 aaPredicted RBP14.25□□□□□ -0.13
DDX39A-208ENST00000588692 B3GNT4Q9C0J1 378 aa14.25□□□□□ -0.13
DDX39A-208ENST00000588692 SEMA6CQ9H3T2 930 aa14.25□□□□□ -0.13
DDX39A-208ENST00000588692 KLC4Q9NSK0 619 aa14.25□□□□□ -0.13
DDX39A-208ENST00000588692 SMOXQ9NWM0 555 aa14.25□□□□□ -0.13
DDX39A-208ENST00000588692 PISDQ9UG56 409 aa14.25□□□□□ -0.13
DDX39A-208ENST00000588692 PACSIN2Q9UNF0 486 aaPredicted RBP14.25□□□□□ -0.13
DDX39A-208ENST00000588692 IGHV5-10-1A0A0J9YXX1 117 aa14.25□□□□□ -0.13
DDX39A-208ENST00000588692 C5orf60A6NFR6 353 aa14.25□□□□□ -0.13
DDX39A-208ENST00000588692 C2orf81A6NN90 581 aa14.25□□□□□ -0.13
DDX39A-208ENST00000588692 NVLO15381 856 aaKnown RBP14.25□□□□□ -0.13
DDX39A-208ENST00000588692 STX7O15400 261 aaKnown RBP14.25□□□□□ -0.13
DDX39A-208ENST00000588692 DDX3YO15523 660 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms