RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, human

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC1-205	ENST00000587888	PCSK7	Q16549	785 aa		13.97	□□□□□ -0.17
ERCC1-205	ENST00000587888	INSC	Q1MX18	579 aa		13.97	□□□□□ -0.17
ERCC1-205	ENST00000587888	ATP1A1-AS1	Q5TC04	95 aa		13.97	□□□□□ -0.17
ERCC1-205	ENST00000587888	B4GALNT4	Q76KP1	1039 aa		13.97	□□□□□ -0.17
ERCC1-205	ENST00000587888	ADGRG6	Q86SQ4	1221 aa		13.97	□□□□□ -0.17
ERCC1-205	ENST00000587888	TRIM48	Q8IWZ4	208 aa		13.97	□□□□□ -0.17
ERCC1-205	ENST00000587888	C9orf43	Q8TAL5	461 aa	Predicted RBP	13.97	□□□□□ -0.17
ERCC1-205	ENST00000587888	FAF2	Q96CS3	445 aa		13.97	□□□□□ -0.17
ERCC1-205	ENST00000587888	HDAC11	Q96DB2	347 aa		13.97	□□□□□ -0.17
ERCC1-205	ENST00000587888	ZNF830	Q96NB3	372 aa	Predicted RBP	13.97	□□□□□ -0.17
ERCC1-205	ENST00000587888	AGAP3	Q96P47	875 aa		13.97	□□□□□ -0.17
ERCC1-205	ENST00000587888	RNF157	Q96PX1	679 aa		13.97	□□□□□ -0.17
ERCC1-205	ENST00000587888	EPN3	Q9H201	632 aa		13.97	□□□□□ -0.17
ERCC1-205	ENST00000587888	TRIT1	Q9H3H1	467 aa	Known RBP	13.97	□□□□□ -0.17
ERCC1-205	ENST00000587888	CBX8	Q9HC52	389 aa		13.97	□□□□□ -0.17
ERCC1-205	ENST00000587888	TUBD1	Q9UJT1	453 aa		13.97	□□□□□ -0.17
ERCC1-205	ENST00000587888	DNAJC16	Q9Y2G8	782 aa		13.97	□□□□□ -0.17
ERCC1-205	ENST00000587888	TMEM184B	Q9Y519	407 aa	Predicted RBP	13.97	□□□□□ -0.17
ERCC1-205	ENST00000587888	MRPS18B	Q9Y676	258 aa	Known RBP	13.97	□□□□□ -0.17
ERCC1-205	ENST00000587888	MTX2	O75431	263 aa		13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	VIP	P01282	170 aa		13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	H2AFZ	P0C0S5	128 aa		13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	TCN2	P20062	427 aa		13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	OAS2	P29728	719 aa	Known RBP	13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	SLC19A1	P41440	591 aa		13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	PPID	Q08752	370 aa	Known RBP	13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	MESD	Q14696	234 aa		13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	ZNF569	Q5MCW4	686 aa		13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	TMEM26	Q6ZUK4	368 aa		13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	H2AFV	Q71UI9	128 aa		13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	APOBEC4	Q8WW27	367 aa	Known RBP	13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	STARD8	Q92502	1023 aa		13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	ABHD17A	Q96GS6	310 aa		13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	ELMO2	Q96JJ3	720 aa		13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	C9orf72	Q96LT7	481 aa		13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	TGM7	Q96PF1	710 aa		13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	MAK16	Q9BXY0	300 aa	Known RBP	13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	PACSIN1	Q9BY11	444 aa		13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	GPR63	Q9BZJ6	419 aa		13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	ULBP3	Q9BZM4	244 aa		13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	BRD8	Q9H0E9	1235 aa		13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	EPB41L1	Q9H4G0	881 aa		13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	OGFR	Q9NZT2	677 aa		13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	ZNF624	Q9P2J8	865 aa	Predicted RBP	13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	UVRAG	Q9P2Y5	699 aa		13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	TRIM10	Q9UDY6	481 aa		13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	ADGRG1	Q9Y653	693 aa		13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	SLC30A1	Q9Y6M5	507 aa		13.96	□□□□□ -0.17
ERCC1-205	ENST00000587888	LRRD1	A4D1F6	860 aa		13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	LILRA5	A6NI73	299 aa		13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	PDZK1P1	A8MUH7	402 aa		13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	KMO	O15229	486 aa		13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	RASSF9	O75901	435 aa		13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	MTA2	O94776	668 aa		13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	UBXN7	O94888	489 aa		13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	DLGAP3	O95886	979 aa		13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	ZNF7	P17097	686 aa	Predicted RBP	13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	XRCC1	P18887	633 aa	Predicted RBP	13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	RPL10	P27635	214 aa	Known RBP	13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	CASP14	P31944	242 aa		13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	LEPR	P48357	1165 aa	Known RBP	13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	CLCNKA	P51800	687 aa		13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	UBE2I	P63279	158 aa	Known RBP	13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	SH3BP2	P78314	561 aa		13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	IFI35	P80217	286 aa	Predicted RBP	13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	MC1R	Q01726	317 aa		13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	NPNT	Q6UXI9	565 aa		13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	TMC3	Q7Z5M5	1100 aa		13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	NT5DC3	Q86UY8	548 aa		13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	LRRTM4	Q86VH4	590 aa		13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	RASGRP3	Q8IV61	690 aa		13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	TRAM1L1	Q8N609	369 aa		13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	ESX1	Q8N693	406 aa		13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	AVL9	Q8NBF6	648 aa		13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	GLYATL1	Q969I3	302 aa		13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	IMP4	Q96G21	291 aa	Known RBP	13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	ZSCAN5A	Q9BUG6	496 aa		13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	MAGEE1	Q9HCI5	957 aa		13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	RPS6KL1	Q9Y6S9	549 aa		13.95	□□□□□ -0.18
ERCC1-205	ENST00000587888	SYCE3	A1L190	88 aa		13.94	□□□□□ -0.18
ERCC1-205	ENST00000587888	CHUK	O15111	745 aa		13.94	□□□□□ -0.18
ERCC1-205	ENST00000587888	KIF1C	O43896	1103 aa	Known RBP	13.94	□□□□□ -0.18
ERCC1-205	ENST00000587888	KATNA1	O75449	491 aa		13.94	□□□□□ -0.18
ERCC1-205	ENST00000587888	CDK14	O94921	469 aa		13.94	□□□□□ -0.18
ERCC1-205	ENST00000587888	C9	P02748	559 aa		13.94	□□□□□ -0.18
ERCC1-205	ENST00000587888	GYPC	P04921	128 aa		13.94	□□□□□ -0.18
ERCC1-205	ENST00000587888	ZNF28	P17035	718 aa		13.94	□□□□□ -0.18
ERCC1-205	ENST00000587888	F8A1	P23610	371 aa		13.94	□□□□□ -0.18
ERCC1-205	ENST00000587888	DLST	P36957	453 aa		13.94	□□□□□ -0.18
ERCC1-205	ENST00000587888	CASR	P41180	1078 aa		13.94	□□□□□ -0.18
ERCC1-205	ENST00000587888	STAT5A	P42229	794 aa		13.94	□□□□□ -0.18
ERCC1-205	ENST00000587888	DRG2	P55039	364 aa	Known RBP	13.94	□□□□□ -0.18
ERCC1-205	ENST00000587888	CDK18	Q07002	472 aa		13.94	□□□□□ -0.18
ERCC1-205	ENST00000587888	ERV3-1	Q14264	604 aa		13.94	□□□□□ -0.18
ERCC1-205	ENST00000587888	CCDC70	Q6NSX1	233 aa		13.94	□□□□□ -0.18
ERCC1-205	ENST00000587888	C6orf15	Q6UXA7	325 aa	Predicted RBP	13.94	□□□□□ -0.18
ERCC1-205	ENST00000587888	PLD5	Q8N7P1	536 aa		13.94	□□□□□ -0.18
ERCC1-205	ENST00000587888	GALNT6	Q8NCL4	622 aa		13.94	□□□□□ -0.18

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