RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 NAT14Q8WUY8 206 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 ULK4Q96C45 1275 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 PHF21BQ96EK2 531 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 PPP1R16AQ96I34 528 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 FAM129BQ96TA1 746 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 CACNA2D2Q9NY47 1150 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 ZDHHC3Q9NYG2 299 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 EPS15L1Q9UBC2 864 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 DHRS7Q9Y394 339 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 DENND4AQ7Z401 1863 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 ANTXRLA6NF34 631 aa19.65■□□□□ 0.74
TRIM47-204ENST00000587339 SMIM24O75264 130 aa19.65■□□□□ 0.74
TRIM47-204ENST00000587339 ELFN1P0C7U0 828 aa19.65■□□□□ 0.74
TRIM47-204ENST00000587339 TPBGLP0DKB5 382 aa19.65■□□□□ 0.74
TRIM47-204ENST00000587339 ETV3P41162 512 aa19.65■□□□□ 0.74
TRIM47-204ENST00000587339 SOX9P48436 509 aa19.65■□□□□ 0.74
TRIM47-204ENST00000587339 DCDC1P59894 354 aa19.65■□□□□ 0.74
TRIM47-204ENST00000587339 COL19A1Q14993 1142 aa19.65■□□□□ 0.74
TRIM47-204ENST00000587339 OR4D1Q15615 310 aa19.65■□□□□ 0.74
TRIM47-204ENST00000587339 EGFLAMQ63HQ2 1017 aa19.65■□□□□ 0.74
TRIM47-204ENST00000587339 DSG4Q86SJ6 1040 aa19.65■□□□□ 0.74
TRIM47-204ENST00000587339 MTDHQ86UE4 582 aaKnown RBP19.65■□□□□ 0.74
TRIM47-204ENST00000587339 CPNE9Q8IYJ1 553 aa19.65■□□□□ 0.74
TRIM47-204ENST00000587339 EEF1AKMT1Q8WVE0 214 aa19.65■□□□□ 0.74
TRIM47-204ENST00000587339 SCAMP4Q969E2 229 aa19.65■□□□□ 0.74
TRIM47-204ENST00000587339 TMEM237Q96Q45 408 aa19.65■□□□□ 0.74
TRIM47-204ENST00000587339 ACOX2Q99424 681 aa19.65■□□□□ 0.74
TRIM47-204ENST00000587339 CDH19Q9H159 772 aa19.65■□□□□ 0.74
TRIM47-204ENST00000587339 MYLK2Q9H1R3 596 aa19.65■□□□□ 0.74
TRIM47-204ENST00000587339 FBRSL1Q9HCM7 1045 aaKnown RBP19.65■□□□□ 0.74
TRIM47-204ENST00000587339 RAD18Q9NS91 495 aa19.65■□□□□ 0.74
TRIM47-204ENST00000587339 SUN2Q9UH99 717 aa19.65■□□□□ 0.74
TRIM47-204ENST00000587339 HCN2Q9UL51 889 aa19.65■□□□□ 0.74
TRIM47-204ENST00000587339 RAP2CQ9Y3L5 183 aa19.65■□□□□ 0.74
TRIM47-204ENST00000587339 PRSS21Q9Y6M0 314 aa19.65■□□□□ 0.74
TRIM47-204ENST00000587339 NPHS1O60500 1241 aa19.64■□□□□ 0.74
TRIM47-204ENST00000587339 TSPAN12O95859 305 aa19.64■□□□□ 0.74
TRIM47-204ENST00000587339 SERPINB3P29508 390 aa19.64■□□□□ 0.74
TRIM47-204ENST00000587339 ZBTB16Q05516 673 aa19.64■□□□□ 0.74
TRIM47-204ENST00000587339 HTR4Q13639 388 aa19.64■□□□□ 0.74
TRIM47-204ENST00000587339 GALNTL6Q49A17 601 aa19.64■□□□□ 0.74
TRIM47-204ENST00000587339 MACC1Q6ZN28 852 aa19.64■□□□□ 0.74
TRIM47-204ENST00000587339 MICALL1Q8N3F8 863 aa19.64■□□□□ 0.74
TRIM47-204ENST00000587339 CSGALNACT1Q8TDX6 532 aa19.64■□□□□ 0.74
TRIM47-204ENST00000587339 EXT2Q93063 718 aa19.64■□□□□ 0.74
TRIM47-204ENST00000587339 LINGO1Q96FE5 620 aa19.64■□□□□ 0.74
TRIM47-204ENST00000587339 ATOH8Q96SQ7 321 aa19.64■□□□□ 0.74
TRIM47-204ENST00000587339 ABCG8Q9H221 673 aa19.64■□□□□ 0.74
TRIM47-204ENST00000587339 DYRK4Q9NR20 520 aa19.64■□□□□ 0.74
TRIM47-204ENST00000587339 RNF112Q9ULX5 631 aa19.64■□□□□ 0.74
TRIM47-204ENST00000587339 ITM2BQ9Y287 266 aa19.64■□□□□ 0.74
TRIM47-204ENST00000587339 BTN3A1O00481 513 aa19.64■□□□□ 0.73
TRIM47-204ENST00000587339 KERAO60938 352 aa19.64■□□□□ 0.73
TRIM47-204ENST00000587339 SLC25A14O95258 325 aaPredicted RBP19.64■□□□□ 0.73
TRIM47-204ENST00000587339 TRIM16O95361 564 aa19.64■□□□□ 0.73
TRIM47-204ENST00000587339 SERPINB5P36952 375 aa19.64■□□□□ 0.73
TRIM47-204ENST00000587339 CCR10P46092 362 aa19.64■□□□□ 0.73
TRIM47-204ENST00000587339 NFKB2Q00653 900 aa19.64■□□□□ 0.73
TRIM47-204ENST00000587339 LRIT3Q3SXY7 679 aa19.64■□□□□ 0.73
TRIM47-204ENST00000587339 HSF5Q4G112 596 aaPredicted RBP19.64■□□□□ 0.73
TRIM47-204ENST00000587339 LIPIQ6XZB0 460 aa19.64■□□□□ 0.73
TRIM47-204ENST00000587339 MMAAQ8IVH4 418 aaKnown RBP19.64■□□□□ 0.73
TRIM47-204ENST00000587339 AGR3Q8TD06 166 aa19.64■□□□□ 0.73
TRIM47-204ENST00000587339 ARRDC3Q96B67 414 aa19.64■□□□□ 0.73
TRIM47-204ENST00000587339 CNDP1Q96KN2 507 aa19.64■□□□□ 0.73
TRIM47-204ENST00000587339 PRSS16Q9NQE7 514 aa19.64■□□□□ 0.73
TRIM47-204ENST00000587339 RGSL1A5PLK6 1076 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 ANHXE9PGG2 379 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 SNUPNO95149 360 aaKnown RBP19.63■□□□□ 0.73
TRIM47-204ENST00000587339 POU3F3P20264 500 aaPredicted RBP19.63■□□□□ 0.73
TRIM47-204ENST00000587339 CORO7P57737 925 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 PRKAA1Q13131 559 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 TSNQ15631 228 aaKnown RBP19.63■□□□□ 0.73
TRIM47-204ENST00000587339 CHPFQ8IZ52 775 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 DTX3LQ8TDB6 740 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 INPP5DQ92835 1189 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 RILPQ96NA2 401 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 STN1Q9H668 368 aaKnown RBP19.63■□□□□ 0.73
TRIM47-204ENST00000587339 ACTR5Q9H9F9 607 aaPredicted RBP19.63■□□□□ 0.73
TRIM47-204ENST00000587339 SMOXQ9NWM0 555 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 NFKBIL1Q9UBC1 381 aaPredicted RBP19.63■□□□□ 0.73
TRIM47-204ENST00000587339 ZFP69BQ9UJL9 534 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 SLC12A4Q9UP95 1085 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 EYSQ5T1H1 3165 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 TCF20Q9UGU0 1960 aaKnown RBP19.63■□□□□ 0.73
TRIM47-204ENST00000587339 IGLV3-16A0A075B6K0 115 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 SYCE1LA8MT33 242 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 C1QTNF3-AMACRE9PGA6 284 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 H0Y858 1186 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 UBXN8O00124 270 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 CDC7O00311 574 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 ADRB3P13945 408 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 MTHFD2P13995 350 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 ALOX15P16050 662 aaPredicted RBP19.63■□□□□ 0.73
TRIM47-204ENST00000587339 ITGB6P18564 788 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 IMPDH1P20839 514 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 RPL14P50914 215 aaKnown RBP19.63■□□□□ 0.73
TRIM47-204ENST00000587339 GALK1P51570 392 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 ELP6Q0PNE2 266 aa19.63■□□□□ 0.73
TRIM47-204ENST00000587339 BNIP1Q12981 228 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms