RNA–Protein interactions for RNA: ENST00000587246.1

NEDD4L-217, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-217ENST00000587246 NCF1CA8MVU1 366 aaPredicted RBP3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 H0YIV9 168 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 DNM1LO00429 736 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 PSMD14O00487 310 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 IFIT3O14879 490 aaKnown RBP3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 MDM4O15151 490 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 SPOPO43791 374 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 VEGFDO43915 354 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 CCNT1O60563 726 aaKnown RBP3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 DIAPH2O60879 1101 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 C22orf31O95567 290 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 NTN1O95631 604 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 CRYABP02511 175 aaKnown RBP3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 S100A9P06702 114 aaKnown RBP3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 FGF2P09038 288 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 CNPP09543 421 aaKnown RBP3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 FAM90A13PP0C7W8 464 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 FAM90A24PP0C7X0 464 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 MYBL1P10243 752 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 PRLRP16471 622 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 CPT2P23786 658 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 PTAFRP25105 342 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 NFKBIAP25963 317 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 TNFRSF8P28908 595 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 SERPINA4P29622 427 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 PGM1P36871 562 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 OR1G1P47890 313 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 HSD17B4P51659 736 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 RARSP54136 660 aaKnown RBP3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 FAM3BP58499 235 aaPredicted RBP3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 HAND2P61296 217 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 RPP30P78346 268 aaKnown RBP3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 SHC2P98077 582 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 ELP6Q0PNE2 266 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 NPRL3Q12980 569 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 CHIT1Q13231 466 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 PLD1Q13393 1074 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 DOC2AQ14183 400 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 EFTUD2Q15029 972 aaKnown RBP eCLIP3.38□□□□□ -1.873e-11■■□□□ 12.5
NEDD4L-217ENST00000587246 RPS6KA2Q15349 733 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 HADHQ16836 314 aaKnown RBP3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 BTBD16Q32M84 506 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 AARDQ4LEZ3 155 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 ALG10Q5BKT4 473 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 FBXO48Q5FWF7 155 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 NHSL2Q5HYW2 709 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 ALG10BQ5I7T1 473 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 TCTE1Q5JU00 501 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 SHEQ5VZ18 495 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 KRT80Q6KB66 452 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 KLC3Q6P597 504 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 ZNF517Q6ZMY9 492 aaPredicted RBP3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 FAM83HQ6ZRV2 1179 aaPredicted RBP3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 CHST3Q7LGC8 479 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 DGLUCYQ7Z3D6 616 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 CACNA2D4Q7Z3S7 1137 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 SPATA24Q86W54 205 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 LINC00346Q8IVM7 164 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 CNTN4Q8IWV2 1026 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 CNTROBQ8N137 903 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 SFRP1Q8N474 314 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 FRMD1Q8N878 549 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 PTGR2Q8N8N7 351 aaPredicted RBP3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 GBP7Q8N8V2 638 aaPredicted RBP3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 ZNF548Q8NEK5 533 aaPredicted RBP3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 SETD6Q8TBK2 473 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 SCFD2Q8WU76 684 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 MRPS27Q92552 414 aaKnown RBP3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 LPAR1Q92633 364 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 STAMQ92783 540 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 MR1Q95460 341 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 DTNBP1Q96EV8 351 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 LYZL4Q96KX0 146 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 CMTM3Q96MX0 182 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 TRAPPC9Q96Q05 1148 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 GCNAQ96QF7 691 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 DDX50Q9BQ39 737 aaKnown RBP3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 WACQ9BTA9 647 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 MECRQ9BV79 373 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 STRA6Q9BX79 667 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 SLC25A18Q9H1K4 315 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 SMARCAD1Q9H4L7 1026 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 EBF3Q9H4W6 596 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 C17orf75Q9HAS0 396 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 FANCEQ9HB96 536 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 SLC22A11Q9NSA0 550 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 SIRT3Q9NTG7 399 aaPredicted RBP3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 DONSONQ9NYP3 566 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 TAS2R10Q9NYW0 307 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 TMOD2Q9NZR1 351 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 TEKT2Q9UIF3 430 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 APPL1Q9UKG1 709 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 RCOR1Q9UKL0 485 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 PSME2Q9UL46 239 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 LIPT1Q9Y234 373 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 RPH3AQ9Y2J0 694 aaPredicted RBP3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 NAALAD2Q9Y3Q0 740 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 PKP3Q9Y446 797 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 SNX9Q9Y5X1 595 aa3.38□□□□□ -1.87
NEDD4L-217ENST00000587246 CLCA3PQ9Y6N3 262 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms