RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 RUNX3Q13761 415 aa14.9□□□□□ -0.02
CDK5RAP3-236ENST00000584991 FLOT2Q14254 428 aa14.9□□□□□ -0.02
CDK5RAP3-236ENST00000584991 GALNT3Q14435 633 aa14.9□□□□□ -0.02
CDK5RAP3-236ENST00000584991 CCDC85BQ15834 202 aaPredicted RBP14.9□□□□□ -0.02
CDK5RAP3-236ENST00000584991 AGAP9Q5VTM2 703 aa14.9□□□□□ -0.02
CDK5RAP3-236ENST00000584991 KLC3Q6P597 504 aa14.9□□□□□ -0.02
CDK5RAP3-236ENST00000584991 CHSY3Q70JA7 882 aa14.9□□□□□ -0.02
CDK5RAP3-236ENST00000584991 SLC22A9Q8IVM8 553 aa14.9□□□□□ -0.02
CDK5RAP3-236ENST00000584991 ACVR1CQ8NER5 493 aa14.9□□□□□ -0.02
CDK5RAP3-236ENST00000584991 OR6K2Q8NGY2 324 aa14.9□□□□□ -0.02
CDK5RAP3-236ENST00000584991 SUSD6Q92537 303 aa14.9□□□□□ -0.02
CDK5RAP3-236ENST00000584991 LRGUKQ96M69 825 aa14.9□□□□□ -0.02
CDK5RAP3-236ENST00000584991 CDRT15Q96T59 188 aa14.9□□□□□ -0.02
CDK5RAP3-236ENST00000584991 SHCBP1LQ9BZQ2 653 aa14.9□□□□□ -0.02
CDK5RAP3-236ENST00000584991 WDR55Q9H6Y2 383 aaPredicted RBP14.9□□□□□ -0.02
CDK5RAP3-236ENST00000584991 VCX3AQ9NNX9 186 aa14.9□□□□□ -0.02
CDK5RAP3-236ENST00000584991 GTSE1Q9NYZ3 720 aa14.9□□□□□ -0.02
CDK5RAP3-236ENST00000584991 XPR1Q9UBH6 696 aa14.9□□□□□ -0.02
CDK5RAP3-236ENST00000584991 SLCO3A1Q9UIG8 710 aa14.9□□□□□ -0.02
CDK5RAP3-236ENST00000584991 DTNAQ9Y4J8 743 aa14.9□□□□□ -0.02
CDK5RAP3-236ENST00000584991 CCDC78A2IDD5 438 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 ENO4A6NNW6 628 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 PHGDHO43175 533 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 ECI2O75521 394 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 EPOP01588 193 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 GDI1P31150 447 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 LEPRP48357 1165 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 CLCN5P51795 746 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 AQP4P55087 323 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 FOXB2Q5VYV0 432 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 LPCAT4Q643R3 524 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 CPA6Q8N4T0 437 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 CYB5D2Q8WUJ1 264 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 SORCS1Q8WY21 1168 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 TRIB3Q96RU7 358 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 SPATA16Q9BXB7 569 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 TDRD1Q9BXT4 1180 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 MRPL1Q9BYD6 325 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 NUF2Q9BZD4 464 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 CIPCQ9C0C6 399 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 WDR41Q9HAD4 459 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 EVLQ9UI08 416 aaPredicted RBP14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 FBXO5Q9UKT4 447 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 ERVW-1Q9UQF0 538 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 RAI2Q9Y5P3 530 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 COL4A3Q01955 1670 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 SPTBN5Q9NRC6 3674 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 NDST3O95803 873 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 ZCCHC18P0CG32 403 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 HLA-DPA1P20036 260 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 GMPRP36959 345 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 FOLH1Q04609 750 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 MESP2Q0VG99 397 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 TRAF2Q12933 501 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 LAMB3Q13751 1172 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 PDK3Q15120 406 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 IRAK1BP1Q5VVH5 260 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 NEPROQ6NW34 567 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 C22orf39Q6P5X5 142 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 SLC41A1Q8IVJ1 513 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 PELI3Q8N2H9 469 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 RYBPQ8N488 228 aaPredicted RBP14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 PEX13Q92968 403 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 NXNL1Q96CM4 212 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 TRMT61BQ9BVS5 477 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 DEC1Q9P2X7 70 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 SARDHQ9UL12 918 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 SLC27A6Q9Y2P4 619 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 ARIH1Q9Y4X5 557 aaPredicted RBP14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 COMMD3-BMI1R4GMX3 469 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 EYSQ5T1H1 3165 aa14.89□□□□□ -0.03
CDK5RAP3-236ENST00000584991 KIAA1549LQ6ZVL6 1849 aa14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 GRXCR2A6NFK2 248 aa14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 BNIP3LO60238 219 aa14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 IGSF6O95976 241 aa14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 PRLP01236 227 aa14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 FGF1P05230 155 aa14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 ARNTP27540 789 aa14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 CSNK1DP48730 415 aa14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 INHBCP55103 352 aa14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 AP1S1P61966 158 aa14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 SNRPD1P62314 119 aaKnown RBP14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 PFKPQ01813 784 aa14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 TRAP1Q12931 704 aaKnown RBP14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 SEPT6Q14141 434 aa14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 ACAP2Q15057 778 aa14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 RBBP5Q15291 538 aaKnown RBP14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 C11orf91Q3C1V1 193 aa14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 THEMIS2Q5TEJ8 643 aa14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 GRAMD4Q6IC98 578 aa14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 ESRP1Q6NXG1 681 aaKnown RBP14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 UGT2A3Q6UWM9 527 aa14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 MTSS1LQ765P7 747 aa14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 TICAM1Q8IUC6 712 aa14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 CEP97Q8IW35 865 aa14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 PHC3Q8NDX5 983 aa14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 OR2AP1Q8NGE2 309 aa14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 WFIKKN2Q8TEU8 576 aa14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 ISG20Q96AZ6 181 aaKnown RBP14.88□□□□□ -0.03
CDK5RAP3-236ENST00000584991 ASB2Q96Q27 587 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms