RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 PROZP22891 400 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 ATP5F1P24539 256 aaPredicted RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 TBXAS1P24557 533 aaPredicted RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 ADORA1P30542 326 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 TTKP33981 857 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 GALNSP34059 522 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 THPOP40225 353 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 METAP2P50579 478 aaKnown RBP eCLIP1.96□□□□□ -2.11e-11■■■□□ 15
SMCHD1-211ENST00000584897 CYP2J2P51589 502 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF134P52741 427 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 EFNA5P52803 228 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 OLR1P78380 273 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 IFI35P80217 286 aaPredicted RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 HOXA4Q00056 320 aaPredicted RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 EPS8Q12929 822 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 BYSLQ13895 437 aaKnown RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 PCID2Q5JVF3 399 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 TMEM88Q6PEY1 159 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 IL20RBQ6UXL0 311 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 STOX1Q6ZVD7 989 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 BBS12Q6ZW61 710 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 MOB2Q70IA6 237 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 CHST3Q7LGC8 479 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 CCDC186Q7Z3E2 898 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 GPR142Q7Z601 462 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 TADA2BQ86TJ2 420 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF557Q8N988 423 aaPredicted RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 KAT2BQ92831 832 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 VPS33AQ96AX1 596 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 INTS12Q96CB8 462 aaKnown RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 HES6Q96HZ4 224 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF845Q96IR2 970 aaPredicted RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 HNRNPABQ99729 332 aaKnown RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 PIP5K1AQ99755 562 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 MECRQ9BV79 373 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 SF3B5Q9BWJ5 86 aaKnown RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 TEKT3Q9BXF9 490 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 ZMYND12Q9H0C1 365 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 MMADHCQ9H3L0 296 aaPredicted RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 RETREG1Q9H6L5 497 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 AZI2Q9H6S1 392 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 POT1Q9NUX5 634 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 BEX4Q9NWD9 120 aaPredicted RBP1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 BARHL2Q9NY43 387 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 COQ3Q9NZJ6 369 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 DLGAP2Q9P1A6 1054 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 CCPG1Q9ULG6 757 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 CHST2Q9Y4C5 530 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 PSAT1Q9Y617 370 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 PIEZO1Q92508 2521 aa1.96□□□□□ -2.1
SMCHD1-211ENST00000584897 PRUNE2Q8WUY3 3088 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 CLUHO75153 1309 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 A0A1W2PQ09 198 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 CYSRT1A8MQ03 144 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 E7EWF7 191 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 PPM1DO15297 605 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 NDUFB10O96000 172 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 TFPIP10646 304 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 PDHBP11177 359 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 EEF2P13639 858 aaKnown RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 ADRA1DP25100 572 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 CENPAP49450 140 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 TPD52P55327 224 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 SRSF1Q07955 248 aaKnown RBP eCLIP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 SPP2Q13103 211 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 MXD4Q14582 209 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 NONOQ15233 471 aaKnown RBP eCLIP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 SARM1Q6SZW1 724 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 METTL7BQ6UX53 244 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 TMPRSS9Q7Z410 1059 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 MFN1Q8IWA4 741 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 POGLUT1Q8NBL1 392 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 CADM4Q8NFZ8 388 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 GADD45GIP1Q8TAE8 222 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 OVCA2Q8WZ82 227 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 GLG1Q92896 1179 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 BBC3Q96PG8 261 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 FNBP1Q96RU3 617 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 TMEM175Q9BSA9 504 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 MLST8Q9BVC4 326 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 TRIM62Q9BVG3 475 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 CCDC106Q9BWC9 280 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 C1QTNF7Q9BXJ2 289 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 LSG1Q9H089 658 aaKnown RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 OR10A4Q9H209 315 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 ERVMER34-1Q9H9K5 563 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 KIF9Q9HAQ2 790 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 XPNPEP3Q9NQH7 507 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 RNF146Q9NTX7 359 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 ARL15Q9NXU5 204 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 SH3BP4Q9P0V3 963 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 ARMCX3Q9UH62 379 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 SMIM35A0A1B0GVV1 85 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 MBD3L5A6NJ08 208 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 POC1B-GALNT4F8VUJ3 575 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 PER2O15055 1255 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 MAPK13O15264 365 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 CTAGE5O15320 804 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 BCAT2O15382 392 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 RANBP6O60518 1105 aaKnown RBP1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms