RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 ERVPABLB-1P60509 514 aa20.52■□□□□ 0.88
TOP3A-218ENST00000584669 ACTR1AP61163 376 aa20.52■□□□□ 0.88
TOP3A-218ENST00000584669 HLTFQ14527 1009 aaKnown RBP eCLIP20.52■□□□□ 0.88
TOP3A-218ENST00000584669 ATP13A5Q4VNC0 1218 aa20.52■□□□□ 0.88
TOP3A-218ENST00000584669 KHDC1Q4VXA5 237 aaKnown RBP20.52■□□□□ 0.88
TOP3A-218ENST00000584669 PDPK2PQ6A1A2 396 aa20.52■□□□□ 0.88
TOP3A-218ENST00000584669 FAM151BQ6UXP7 276 aa20.52■□□□□ 0.88
TOP3A-218ENST00000584669 CHST15Q7LFX5 561 aaPredicted RBP20.52■□□□□ 0.88
TOP3A-218ENST00000584669 ADGRG6Q86SQ4 1221 aa20.52■□□□□ 0.88
TOP3A-218ENST00000584669 PRUNE1Q86TP1 453 aa20.52■□□□□ 0.88
TOP3A-218ENST00000584669 WDR48Q8TAF3 677 aa20.52■□□□□ 0.88
TOP3A-218ENST00000584669 GRAMD1AQ96CP6 724 aa20.52■□□□□ 0.88
TOP3A-218ENST00000584669 RTP4Q96DX8 246 aa20.52■□□□□ 0.88
TOP3A-218ENST00000584669 FRMD8P1Q9BZ68 369 aaPredicted RBP20.52■□□□□ 0.88
TOP3A-218ENST00000584669 TRIM39Q9HCM9 518 aa20.52■□□□□ 0.88
TOP3A-218ENST00000584669 ZNF148Q9UQR1 794 aa20.52■□□□□ 0.88
TOP3A-218ENST00000584669 PKP3Q9Y446 797 aa20.52■□□□□ 0.88
TOP3A-218ENST00000584669 KCTD3Q9Y597 815 aa20.52■□□□□ 0.88
TOP3A-218ENST00000584669 RNF215Q9Y6U7 377 aa20.52■□□□□ 0.88
TOP3A-218ENST00000584669 GAPDHSO14556 408 aaPredicted RBP20.51■□□□□ 0.87
TOP3A-218ENST00000584669 KLK10O43240 276 aa20.51■□□□□ 0.87
TOP3A-218ENST00000584669 NUAK1O60285 661 aa20.51■□□□□ 0.87
TOP3A-218ENST00000584669 CA5AP35218 305 aa20.51■□□□□ 0.87
TOP3A-218ENST00000584669 TAF1AQ15573 450 aaPredicted RBP20.51■□□□□ 0.87
TOP3A-218ENST00000584669 CHRNA6Q15825 494 aa20.51■□□□□ 0.87
TOP3A-218ENST00000584669 CERCAMQ5T4B2 595 aa20.51■□□□□ 0.87
TOP3A-218ENST00000584669 PHYKPLQ8IUZ5 450 aa20.51■□□□□ 0.87
TOP3A-218ENST00000584669 REXO1L1PQ8IX06 675 aa20.51■□□□□ 0.87
TOP3A-218ENST00000584669 NAGSQ8N159 534 aa20.51■□□□□ 0.87
TOP3A-218ENST00000584669 SLC39A7Q92504 469 aa20.51■□□□□ 0.87
TOP3A-218ENST00000584669 VPS35Q96QK1 796 aa20.51■□□□□ 0.87
TOP3A-218ENST00000584669 RMI1Q9H9A7 625 aa20.51■□□□□ 0.87
TOP3A-218ENST00000584669 WDR70Q9NW82 654 aa20.51■□□□□ 0.87
TOP3A-218ENST00000584669 PIKFYVEQ9Y2I7 2098 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 STX7O15400 261 aaKnown RBP20.5■□□□□ 0.87
TOP3A-218ENST00000584669 GRID2O43424 1007 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 CEP104O60308 925 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 UGT1A9O60656 530 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 ECEL1O95672 775 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 IFNB1P01574 187 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 FGGP02679 453 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 ACP5P13686 325 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 ETS1P14921 441 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 GLB1P16278 677 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 UGT1A6P19224 532 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 LPOP22079 712 aaPredicted RBP20.5■□□□□ 0.87
TOP3A-218ENST00000584669 UGT1A1P22309 533 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 UGT1A4P22310 534 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 STIP1P31948 543 aaKnown RBP20.5■□□□□ 0.87
TOP3A-218ENST00000584669 UGT1A3P35503 534 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 UGT1A5P35504 534 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 CCL7P80098 99 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 P3H1Q32P28 736 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 CRTC3Q6UUV7 619 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 C17orf82Q86X59 251 aaPredicted RBP20.5■□□□□ 0.87
TOP3A-218ENST00000584669 Q8N9G6 341 aaPredicted RBP20.5■□□□□ 0.87
TOP3A-218ENST00000584669 GLIS1Q8NBF1 620 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 OR4K2Q8NGD2 314 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 WDR36Q8NI36 951 aaKnown RBP20.5■□□□□ 0.87
TOP3A-218ENST00000584669 GFM1Q96RP9 751 aaKnown RBP20.5■□□□□ 0.87
TOP3A-218ENST00000584669 UGT1A7Q9HAW7 530 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 UGT1A10Q9HAW8 530 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 UGT1A8Q9HAW9 530 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 ARNT2Q9HBZ2 717 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 CPNE5Q9HCH3 593 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 EPB41L5Q9HCM4 733 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 LRIT1Q9P2V4 623 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 KCNK6Q9Y257 313 aa20.5■□□□□ 0.87
TOP3A-218ENST00000584669 CCDC187A0A096LP49 1063 aa20.49■□□□□ 0.87
TOP3A-218ENST00000584669 GLYATL1P3A0A0U1RQE8 302 aa20.49■□□□□ 0.87
TOP3A-218ENST00000584669 ATXN7O15265 892 aaPredicted RBP20.49■□□□□ 0.87
TOP3A-218ENST00000584669 TNFSF15O95150 251 aa20.49■□□□□ 0.87
TOP3A-218ENST00000584669 EML2O95834 649 aa20.49■□□□□ 0.87
TOP3A-218ENST00000584669 RPLP0P05388 317 aaKnown RBP20.49■□□□□ 0.87
TOP3A-218ENST00000584669 PDX1P52945 283 aa20.49■□□□□ 0.87
TOP3A-218ENST00000584669 TMPRSS3P57727 454 aa20.49■□□□□ 0.87
TOP3A-218ENST00000584669 LRP8Q14114 963 aa20.49■□□□□ 0.87
TOP3A-218ENST00000584669 ZDHHC20Q5W0Z9 365 aa20.49■□□□□ 0.87
TOP3A-218ENST00000584669 ARL14Q8N4G2 192 aa20.49■□□□□ 0.87
TOP3A-218ENST00000584669 OR6C4Q8NGE1 309 aa20.49■□□□□ 0.87
TOP3A-218ENST00000584669 BRSK1Q8TDC3 778 aa20.49■□□□□ 0.87
TOP3A-218ENST00000584669 SLC46A1Q96NT5 459 aa20.49■□□□□ 0.87
TOP3A-218ENST00000584669 FOXP3Q9BZS1 431 aa20.49■□□□□ 0.87
TOP3A-218ENST00000584669 LRRC40Q9H9A6 602 aa20.49■□□□□ 0.87
TOP3A-218ENST00000584669 PIH1D1Q9NWS0 290 aaKnown RBP20.49■□□□□ 0.87
TOP3A-218ENST00000584669 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.49■□□□□ 0.87
TOP3A-218ENST00000584669 TRBV23OR9-2A0A075B6M9 112 aa20.48■□□□□ 0.87
TOP3A-218ENST00000584669 TEX51A0A1B0GUA7 166 aa20.48■□□□□ 0.87
TOP3A-218ENST00000584669 A0A1W2PQM1 296 aa20.48■□□□□ 0.87
TOP3A-218ENST00000584669 C2orf81A6NN90 581 aa20.48■□□□□ 0.87
TOP3A-218ENST00000584669 NTN3O00634 580 aaPredicted RBP20.48■□□□□ 0.87
TOP3A-218ENST00000584669 CHUKO15111 745 aa20.48■□□□□ 0.87
TOP3A-218ENST00000584669 AP2A1O95782 977 aa20.48■□□□□ 0.87
TOP3A-218ENST00000584669 TPH1P17752 444 aa20.48■□□□□ 0.87
TOP3A-218ENST00000584669 UCNP55089 124 aa20.48■□□□□ 0.87
TOP3A-218ENST00000584669 CCNG2Q16589 344 aa20.48■□□□□ 0.87
TOP3A-218ENST00000584669 PLA2G4EQ3MJ16 856 aa20.48■□□□□ 0.87
TOP3A-218ENST00000584669 ARHGAP40Q5TG30 622 aa20.48■□□□□ 0.87
TOP3A-218ENST00000584669 B3GNT8Q7Z7M8 397 aa20.48■□□□□ 0.87
TOP3A-218ENST00000584669 CCNJLQ8IV13 435 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms