RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-223ENST00000582114 LLGL1Q15334 1064 aa11.48□□□□□ -0.57
CDK5RAP3-223ENST00000582114 INSCQ1MX18 579 aa11.48□□□□□ -0.57
CDK5RAP3-223ENST00000582114 ATP1A1-AS1Q5TC04 95 aa11.48□□□□□ -0.57
CDK5RAP3-223ENST00000582114 ADGRG6Q86SQ4 1221 aa11.48□□□□□ -0.57
CDK5RAP3-223ENST00000582114 NT5DC3Q86UY8 548 aa11.48□□□□□ -0.57
CDK5RAP3-223ENST00000582114 RFX6Q8HWS3 928 aa11.48□□□□□ -0.57
CDK5RAP3-223ENST00000582114 NLGN4XQ8N0W4 816 aa11.48□□□□□ -0.57
CDK5RAP3-223ENST00000582114 NLGN4YQ8NFZ3 816 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP3-223ENST00000582114 SH3KBP1Q96B97 665 aa11.48□□□□□ -0.57
CDK5RAP3-223ENST00000582114 RNF25Q96BH1 459 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP3-223ENST00000582114 IQCDQ96DY2 449 aa11.48□□□□□ -0.57
CDK5RAP3-223ENST00000582114 TGM7Q96PF1 710 aa11.48□□□□□ -0.57
CDK5RAP3-223ENST00000582114 PLEKHG4BQ96PX9 1271 aa11.48□□□□□ -0.57
CDK5RAP3-223ENST00000582114 TRIB3Q96RU7 358 aa11.48□□□□□ -0.57
CDK5RAP3-223ENST00000582114 MAK16Q9BXY0 300 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-223ENST00000582114 GPR63Q9BZJ6 419 aa11.48□□□□□ -0.57
CDK5RAP3-223ENST00000582114 XPO4Q9C0E2 1151 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-223ENST00000582114 RMI1Q9H9A7 625 aa11.48□□□□□ -0.57
CDK5RAP3-223ENST00000582114 BPIFA1Q9NP55 256 aa11.48□□□□□ -0.57
CDK5RAP3-223ENST00000582114 UBP1Q9NZI7 540 aa11.48□□□□□ -0.57
CDK5RAP3-223ENST00000582114 TRIM10Q9UDY6 481 aa11.48□□□□□ -0.57
CDK5RAP3-223ENST00000582114 ZNF711Q9Y462 761 aa11.48□□□□□ -0.57
CDK5RAP3-223ENST00000582114 HYOU1Q9Y4L1 999 aa11.48□□□□□ -0.57
CDK5RAP3-223ENST00000582114 MRPS18BQ9Y676 258 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-223ENST00000582114 RGSL1A5PLK6 1076 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 PDZK1P1A8MUH7 402 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 AURKAO14965 403 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 PMPCBO75439 489 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 MTA2O94776 668 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 TMEM253P0C7T8 217 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 SLC2A4P14672 509 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 AMD1P17707 334 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 RPL10P27635 214 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 MAN1A1P33908 653 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 NOP2P46087 812 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 SEPHS1P49903 392 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 EPHA4P54764 986 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 UBE2IP63279 158 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 FOXM1Q08050 763 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 NOMO1Q15155 1222 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 SKIDA1Q1XH10 827 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 KHDC1Q4VXA5 237 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 COLEC12Q5KU26 742 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 CEACAM20Q6UY09 585 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 TRIM48Q8IWZ4 208 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 RAVER1Q8IY67 606 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 SLC35G2Q8TBE7 412 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 GLYATL1Q969I3 302 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 COL26A1Q96A83 441 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 KIAA1143Q96AT1 154 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 IMP4Q96G21 291 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 ELMO2Q96JJ3 720 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 TEFMQ96QE5 360 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 ZSCAN5AQ9BUG6 496 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 TRIM39Q9HCM9 518 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 ZNF71Q9NQZ8 489 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 SPTLC3Q9NUV7 552 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 OGFRQ9NZT2 677 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 SPO11Q9Y5K1 396 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.47□□□□□ -0.571e-7■■■□□ 15.1
CDK5RAP3-223ENST00000582114 ADGRG1Q9Y653 693 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 SLC30A1Q9Y6M5 507 aa11.47□□□□□ -0.57
CDK5RAP3-223ENST00000582114 LILRA5A6NI73 299 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 OR5K4A6NMS3 321 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 OR52A4PA6NMU1 304 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 POLR1CO15160 346 aaPredicted RBP11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 AKR1B10O60218 316 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 VIPP01282 170 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 BPIP17213 487 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 MAP4P27816 1152 aaKnown RBP11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 OAS2P29728 719 aaKnown RBP11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 HNRNPH3P31942 346 aaKnown RBP11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 SLC19A1P41440 591 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 CCR10P46092 362 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 LEPRP48357 1165 aaKnown RBP11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 DRG2P55039 364 aaKnown RBP11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 SH3BP2P78314 561 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 TLE1Q04724 770 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 CDK18Q07002 472 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 CDC20Q12834 499 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 PDK1Q15118 436 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 ASTE1Q2TB18 679 aaPredicted RBP11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 DEFB109BQ30KR1 87 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 ODF2Q5BJF6 829 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 SLC9A4Q6AI14 798 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 C16orf46Q6P387 395 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 TMC3Q7Z5M5 1100 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 LRRTM4Q86VH4 590 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 PLXDC1Q8IUK5 500 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 TRAM1L1Q8N609 369 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 STARD8Q92502 1023 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 SLC45A3Q96JT2 553 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 CHP1Q99653 195 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 ULBP3Q9BZM4 244 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 SPRY4Q9C004 299 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 SLC25A51Q9H1U9 297 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 FBXO8Q9NRD0 319 aa11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 ZNF624Q9P2J8 865 aaPredicted RBP11.46□□□□□ -0.57
CDK5RAP3-223ENST00000582114 SAE1Q9UBE0 346 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms