RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 GDAP1Q8TB36 358 aa15.74■□□□□ 0.11
CSNK1D-212ENST00000580061 HEXDCQ8WVB3 486 aa15.74■□□□□ 0.11
CSNK1D-212ENST00000580061 HNRNPLLQ8WVV9 542 aaKnown RBP15.74■□□□□ 0.11
CSNK1D-212ENST00000580061 PIGKQ92643 395 aa15.74■□□□□ 0.11
CSNK1D-212ENST00000580061 LOXL4Q96JB6 756 aa15.74■□□□□ 0.11
CSNK1D-212ENST00000580061 COPS8Q99627 209 aa15.74■□□□□ 0.11
CSNK1D-212ENST00000580061 IRF2BPLQ9H1B7 796 aa15.74■□□□□ 0.11
CSNK1D-212ENST00000580061 ACSS3Q9H6R3 686 aa15.74■□□□□ 0.11
CSNK1D-212ENST00000580061 INTS10Q9NVR2 710 aaKnown RBP15.74■□□□□ 0.11
CSNK1D-212ENST00000580061 SUSD2Q9UGT4 822 aa15.74■□□□□ 0.11
CSNK1D-212ENST00000580061 FBXO5Q9UKT4 447 aa15.74■□□□□ 0.11
CSNK1D-212ENST00000580061 UQCRHLA0A096LP55 91 aa15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 TMEM202A6NGA9 273 aa15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 PRR5-ARHGAP8B1AHC4 643 aa15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 VILLO15195 856 aa15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 MTX2O75431 263 aa15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 S1PR4O95977 384 aa15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 UQCRHP07919 91 aa15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 HOXD12P35452 270 aa15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 AFF3P51826 1226 aaKnown RBP15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 THOP1P52888 689 aa15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 MPP1Q00013 466 aa15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 B4GALNT1Q00973 533 aa15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 TMEM115Q12893 351 aaPredicted RBP15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 PDE1CQ14123 709 aaPredicted RBP15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 EFTUD2Q15029 972 aaKnown RBP eCLIP15.73■□□□□ 0.112e-8■■□□□ 13.1
CSNK1D-212ENST00000580061 RNF187Q5TA31 235 aaPredicted RBP15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 LAYNQ6UX15 382 aa15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 PACS1Q6VY07 963 aa15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 MARK2Q7KZI7 788 aaKnown RBP15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 GALNT7Q86SF2 657 aa15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 ADGRG6Q86SQ4 1221 aa15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 SLC26A11Q86WA9 606 aa15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 DCP2Q8IU60 420 aaKnown RBP15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 RBFAQ8N0V3 343 aa15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 UHMK1Q8TAS1 419 aaKnown RBP15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 CCDC97Q96F63 343 aaPredicted RBP15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 CYTH2Q99418 400 aa15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 BOCQ9BWV1 1114 aa15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 FBXO6Q9NRD1 293 aaPredicted RBP15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 NSMCE4AQ9NXX6 385 aa15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 ATXN10Q9UBB4 475 aa15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 RAB23Q9ULC3 237 aa15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 TMEM98Q9Y2Y6 226 aa15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 TMEM131Q92545 1883 aa15.73■□□□□ 0.11
CSNK1D-212ENST00000580061 CACNA1HO95180 2353 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 TLR4O00206 839 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 PFDN6O15212 129 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 VEGFDO43915 354 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 OR1I1O60431 355 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 MAGEC1O60732 1142 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 NDUFS3O75489 264 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 EPN2O95208 641 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 ASMTLO95671 621 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 CEACAM5P06731 702 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 F7P08709 466 aaPredicted RBP15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 ZNF7P17097 686 aaPredicted RBP15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 MSH3P20585 1137 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 KELP23276 732 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 HTR1BP28222 390 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 AKT1P31749 480 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 NSG1P42857 185 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 LEPRP48357 1165 aaKnown RBP15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 CSNK1EP49674 416 aaKnown RBP15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 NAB1Q13506 487 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 PTK2BQ14289 1009 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 KLHL38Q2WGJ6 581 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 ZNF789Q5FWF6 425 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 BEND6Q5SZJ8 279 aaPredicted RBP15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 DOK6Q6PKX4 331 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 ENPP7Q6UWV6 458 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 MACC1Q6ZN28 852 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 CTAGE3PQ8IX95 158 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 PPM1NQ8N819 430 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 OR56A4Q8NGH8 313 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 LPGAT1Q92604 370 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 ATOH1Q92858 354 aaPredicted RBP15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 DCUN1D1Q96GG9 259 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 WDR92Q96MX6 357 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 ZCCHC2Q9C0B9 1178 aaKnown RBP15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 VPS18Q9P253 973 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 SMG5Q9UPR3 1016 aaKnown RBP15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 SLC17A4Q9Y2C5 497 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 PSAT1Q9Y617 370 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 RALGAPA1Q6GYQ0 2036 aa15.72■□□□□ 0.11
CSNK1D-212ENST00000580061 ADAMTS9Q9P2N4 1935 aa15.71■□□□□ 0.11
CSNK1D-212ENST00000580061 SPTY2D1-AS1A0A0U1RR47 76 aa15.71■□□□□ 0.11
CSNK1D-212ENST00000580061 CFAP99D6REC4 459 aa15.71■□□□□ 0.11
CSNK1D-212ENST00000580061 CDK14O94921 469 aa15.71■□□□□ 0.11
CSNK1D-212ENST00000580061 HAUS5O94927 633 aa15.71■□□□□ 0.11
CSNK1D-212ENST00000580061 AHSGP02765 367 aa15.71■□□□□ 0.11
CSNK1D-212ENST00000580061 RALBP11234 206 aa15.71■□□□□ 0.11
CSNK1D-212ENST00000580061 ATP1B2P14415 290 aaPredicted RBP15.71■□□□□ 0.11
CSNK1D-212ENST00000580061 H2AFXP16104 143 aaPredicted RBP15.71■□□□□ 0.11
CSNK1D-212ENST00000580061 ZNF8P17098 575 aaPredicted RBP15.71■□□□□ 0.11
CSNK1D-212ENST00000580061 GABRB3P28472 473 aa15.71■□□□□ 0.11
CSNK1D-212ENST00000580061 POLD2P49005 469 aa15.71■□□□□ 0.11
CSNK1D-212ENST00000580061 ADARP55265 1226 aaKnown RBP15.71■□□□□ 0.11
CSNK1D-212ENST00000580061 NXPH1P58417 271 aa15.71■□□□□ 0.11
CSNK1D-212ENST00000580061 TEAD4Q15561 434 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms