RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 CDK18Q07002 472 aa16.43■□□□□ 0.22
CDK5RAP3-206ENST00000578018 PRKD1Q15139 912 aaPredicted RBP16.43■□□□□ 0.22
CDK5RAP3-206ENST00000578018 TBR1Q16650 682 aa16.43■□□□□ 0.22
CDK5RAP3-206ENST00000578018 SNAP47Q5SQN1 464 aa16.43■□□□□ 0.22
CDK5RAP3-206ENST00000578018 PDPK2PQ6A1A2 396 aa16.43■□□□□ 0.22
CDK5RAP3-206ENST00000578018 B4GALNT4Q76KP1 1039 aa16.43■□□□□ 0.22
CDK5RAP3-206ENST00000578018 ARHGAP22Q7Z5H3 698 aa16.43■□□□□ 0.22
CDK5RAP3-206ENST00000578018 ADGRG6Q86SQ4 1221 aa16.43■□□□□ 0.22
CDK5RAP3-206ENST00000578018 RHOT1Q8IXI2 618 aa16.43■□□□□ 0.22
CDK5RAP3-206ENST00000578018 SPATA22Q8NHS9 363 aa16.43■□□□□ 0.22
CDK5RAP3-206ENST00000578018 GLYATL1Q969I3 302 aa16.43■□□□□ 0.22
CDK5RAP3-206ENST00000578018 ARHGAP9Q9BRR9 750 aa16.43■□□□□ 0.22
CDK5RAP3-206ENST00000578018 TRIM39Q9HCM9 518 aa16.43■□□□□ 0.22
CDK5RAP3-206ENST00000578018 PRDM8Q9NQV8 689 aa16.43■□□□□ 0.22
CDK5RAP3-206ENST00000578018 RAD18Q9NS91 495 aa16.43■□□□□ 0.22
CDK5RAP3-206ENST00000578018 CPNE7Q9UBL6 633 aa16.43■□□□□ 0.22
CDK5RAP3-206ENST00000578018 HYOU1Q9Y4L1 999 aa16.43■□□□□ 0.22
CDK5RAP3-206ENST00000578018 SPO11Q9Y5K1 396 aa16.43■□□□□ 0.22
CDK5RAP3-206ENST00000578018 LILRA5A6NI73 299 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 OR5K4A6NMS3 321 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 A8MU76 341 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 CHUKO15111 745 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 SLC25A14O95258 325 aaPredicted RBP16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 NDST3O95803 873 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 LIFP15018 202 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 PTPN3P26045 913 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 CDKN2BP42772 138 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 MAPK9P45984 424 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 NFATC3Q12968 1075 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 TCEAL1Q15170 157 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 TAZQ16635 292 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 TEX44Q53QW1 395 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 DCAF12Q5T6F0 453 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 CRTC3Q6UUV7 619 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 MFSD7Q6UXD7 560 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 IL22RA1Q8N6P7 574 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 AVL9Q8NBF6 648 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 NCSTNQ92542 709 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 SLC12A9Q9BXP2 914 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 GPR63Q9BZJ6 419 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 OSGEPL1Q9H4B0 414 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 EPB41L1Q9H4G0 881 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 GLOD4Q9HC38 313 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 KLC4Q9NSK0 619 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 DDX56Q9NY93 547 aaKnown RBP16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 SLC23A2Q9UGH3 650 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 INTUQ9ULD6 942 aa16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 MN1Q10571 1320 aaPredicted RBP16.42■□□□□ 0.22
CDK5RAP3-206ENST00000578018 A0A0A6YYK5 440 aaPredicted RBP16.41■□□□□ 0.22
CDK5RAP3-206ENST00000578018 PRR19A6NJB7 356 aa16.41■□□□□ 0.22
CDK5RAP3-206ENST00000578018 AURKAO14965 403 aa16.41■□□□□ 0.22
CDK5RAP3-206ENST00000578018 SLC28A2O43868 658 aa16.41■□□□□ 0.22
CDK5RAP3-206ENST00000578018 RAD1O60671 282 aa16.41■□□□□ 0.22
CDK5RAP3-206ENST00000578018 PMPCBO75439 489 aa16.41■□□□□ 0.22
CDK5RAP3-206ENST00000578018 TNNT1P13805 278 aa16.41■□□□□ 0.22
CDK5RAP3-206ENST00000578018 PECAM1P16284 738 aaPredicted RBP16.41■□□□□ 0.22
CDK5RAP3-206ENST00000578018 BPIP17213 487 aa16.41■□□□□ 0.22
CDK5RAP3-206ENST00000578018 ITGB6P18564 788 aa16.41■□□□□ 0.22
CDK5RAP3-206ENST00000578018 COMTP21964 271 aa16.41■□□□□ 0.22
CDK5RAP3-206ENST00000578018 MC2RQ01718 297 aa16.41■□□□□ 0.22
CDK5RAP3-206ENST00000578018 PLA2G4EQ3MJ16 856 aa16.41■□□□□ 0.22
CDK5RAP3-206ENST00000578018 ODF2Q5BJF6 829 aa16.41■□□□□ 0.22
CDK5RAP3-206ENST00000578018 CACNA2D3Q8IZS8 1091 aa16.41■□□□□ 0.22
CDK5RAP3-206ENST00000578018 RTP4Q96DX8 246 aa16.41■□□□□ 0.22
CDK5RAP3-206ENST00000578018 TEKT5Q96M29 485 aa16.41■□□□□ 0.22
CDK5RAP3-206ENST00000578018 PLEKHG4BQ96PX9 1271 aa16.41■□□□□ 0.22
CDK5RAP3-206ENST00000578018 TEFMQ96QE5 360 aaKnown RBP16.41■□□□□ 0.22
CDK5RAP3-206ENST00000578018 TBC1D10AQ9BXI6 508 aa16.41■□□□□ 0.22
CDK5RAP3-206ENST00000578018 STARD5Q9NSY2 213 aa16.41■□□□□ 0.22
CDK5RAP3-206ENST00000578018 SCHIP1Q9P0W5 487 aaPredicted RBP16.41■□□□□ 0.22
CDK5RAP3-206ENST00000578018 SAE1Q9UBE0 346 aaPredicted RBP16.41■□□□□ 0.22
CDK5RAP3-206ENST00000578018 PILRAQ9UKJ1 303 aa16.41■□□□□ 0.22
CDK5RAP3-206ENST00000578018 PYCARD-AS1I3L0S3 204 aa16.4■□□□□ 0.22
CDK5RAP3-206ENST00000578018 SPOPO43791 374 aa16.4■□□□□ 0.22
CDK5RAP3-206ENST00000578018 MTX2O75431 263 aa16.4■□□□□ 0.22
CDK5RAP3-206ENST00000578018 CD68P34810 354 aaPredicted RBP16.4■□□□□ 0.22
CDK5RAP3-206ENST00000578018 NR2C2P49116 596 aa16.4■□□□□ 0.22
CDK5RAP3-206ENST00000578018 WASHC5Q12768 1159 aa16.4■□□□□ 0.22
CDK5RAP3-206ENST00000578018 INSCQ1MX18 579 aa16.4■□□□□ 0.22
CDK5RAP3-206ENST00000578018 KHDC1Q4VXA5 237 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-206ENST00000578018 LRRTM4Q86VH4 590 aa16.4■□□□□ 0.22
CDK5RAP3-206ENST00000578018 CNGA4Q8IV77 575 aa16.4■□□□□ 0.22
CDK5RAP3-206ENST00000578018 ZNF547Q8IVP9 402 aa16.4■□□□□ 0.22
CDK5RAP3-206ENST00000578018 SRPK1Q96SB4 655 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-206ENST00000578018 CTRCQ99895 268 aa16.4■□□□□ 0.22
CDK5RAP3-206ENST00000578018 TIMM29Q9BSF4 260 aa16.4■□□□□ 0.22
CDK5RAP3-206ENST00000578018 SPRY4Q9C004 299 aa16.4■□□□□ 0.22
CDK5RAP3-206ENST00000578018 UCK1Q9HA47 277 aa16.4■□□□□ 0.22
CDK5RAP3-206ENST00000578018 UBP1Q9NZI7 540 aa16.4■□□□□ 0.22
CDK5RAP3-206ENST00000578018 KLHL3Q9UH77 587 aa16.4■□□□□ 0.22
CDK5RAP3-206ENST00000578018 TMPRSS11EQ9UL52 423 aa16.4■□□□□ 0.22
CDK5RAP3-206ENST00000578018 KMOO15229 486 aa16.39■□□□□ 0.21
CDK5RAP3-206ENST00000578018 PSTPIP1O43586 416 aa16.39■□□□□ 0.21
CDK5RAP3-206ENST00000578018 VEGFDO43915 354 aa16.39■□□□□ 0.21
CDK5RAP3-206ENST00000578018 CST8O60676 142 aa16.39■□□□□ 0.21
CDK5RAP3-206ENST00000578018 ANKRD34CP0C6C1 535 aa16.39■□□□□ 0.21
CDK5RAP3-206ENST00000578018 ZNF7P17097 686 aaPredicted RBP16.39■□□□□ 0.21
CDK5RAP3-206ENST00000578018 XRCC1P18887 633 aaPredicted RBP16.39■□□□□ 0.21
CDK5RAP3-206ENST00000578018 GFERP55789 205 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms