RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 SGCGQ13326 291 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 NFATC2Q13469 925 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 NAB1Q13506 487 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 SEPT6Q14141 434 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 SLC29A2Q14542 456 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 LRRC14Q15048 493 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ACOX1Q15067 660 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 UAP1Q16222 522 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TYSND1Q2T9J0 566 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 WSCD2Q2TBF2 565 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 HP1BP3Q5SSJ5 553 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 LYPLAL1Q5VWZ2 237 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 SEL1L3Q68CR1 1132 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 NEPROQ6NW34 567 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PNCKQ6P2M8 343 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 AFTPHQ6ULP2 937 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CES3Q6UWW8 571 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ADAMTSL4Q6UY14 1074 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 RFLNAQ6ZTI6 216 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 SLC26A11Q86WA9 606 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 GSPT2Q8IYD1 628 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 FRMD1Q8N878 549 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TMEM145Q8NBT3 493 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 C1orf216Q8TAB5 229 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 GABPB2Q8TAK5 448 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ZNF398Q8TD17 642 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 BTN2A2Q8WVV5 523 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 RLN3Q8WXF3 142 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 FOXJ1Q92949 421 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ZNF669Q96BR6 464 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 BIRC7Q96CA5 298 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 SPACA7Q96KW9 195 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TEX101Q9BY14 249 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 C6orf106Q9H6K1 298 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ACSS3Q9H6R3 686 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PPCSQ9HAB8 311 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 EBF2Q9HAK2 575 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 BPIFA1Q9NP55 256 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TMPRSS11EQ9UL52 423 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CNOT6Q9ULM6 557 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 NUMA1Q14980 2115 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PLXNA2O75051 1894 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 A0A087WUV0 522 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PRAMEF26H0Y7S4 382 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CD3EAPO15446 510 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 BUD23O43709 281 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 OGNP20774 298 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 HNRNPA2B1P22626 353 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 MC4RP32245 332 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 HSD17B3P37058 310 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 LEPRP48357 1165 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PPP2CBP62714 309 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PPP2CAP67775 309 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 MGAT5Q09328 741 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 SETMARQ53H47 684 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 MRNIPQ6NTE8 343 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TRMT10BQ6PF06 316 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PCSK4Q6UW60 755 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 FAM124AQ86V42 546 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 KCNMB4Q86W47 210 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CACUL1Q86Y37 369 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CILP2Q8IUL8 1156 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 C2CD4AQ8NCU7 369 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 FBF1Q8TES7 1133 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 HEXDCQ8WVB3 486 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ANKRD7Q92527 254 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 SCAMP4Q969E2 229 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ULK4Q96C45 1275 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 AP2M1Q96CW1 435 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 NUS1Q96E22 293 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 COX14Q96I36 57 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PKNOX2Q96KN3 472 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CYTH2Q99418 400 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 DHRS4Q9BTZ2 278 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TMEM109Q9BVC6 243 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 RIOK2Q9BVS4 552 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 GPR174Q9BXC1 333 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 SUDS3Q9H7L9 328 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ARFGAP3Q9NP61 516 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 GPR27Q9NS67 375 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ARGLU1Q9NWB6 273 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 NSMCE4AQ9NXX6 385 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 VPS18Q9P253 973 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 FKBPLQ9UIM3 349 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PTPRBP23467 1997 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ATMQ13315 3056 aa11.04□□□□□ -0.64
CDK5RAP3-204ENST00000577664 UQCRHLA0A096LP55 91 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 GPR89AB7ZAQ6 455 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 NDUFS2O75306 463 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 WISP1O95388 367 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PRAMEF1O95521 474 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 S1PR4O95977 384 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 UQCRHP07919 91 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 GPR89BP0CG08 455 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CD9P21926 228 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CD27P26842 260 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PPARGP37231 505 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PFN3P60673 137 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 YPEL5P62699 121 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms