RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 THRAP10827 490 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 CEBPBP17676 345 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 ZNF140P52738 457 aaPredicted RBP13.72□□□□□ -0.21
RNF43-202ENST00000577625 PLK1P53350 603 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 PGGT1BP53609 377 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 TAS2R39P59534 338 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 ILF2Q12905 390 aaKnown RBP13.72□□□□□ -0.21
RNF43-202ENST00000577625 ZNF789Q5FWF6 425 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 RALGPS1Q5JS13 557 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 RETSATQ6NUM9 610 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 NIPAL1Q6NVV3 410 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 IYDQ6PHW0 289 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 TMEM25Q86YD3 366 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 TNS4Q8IZW8 715 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 CENPLQ8N0S6 344 aaPredicted RBP13.72□□□□□ -0.21
RNF43-202ENST00000577625 PNPLA1Q8N8W4 532 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 CATSPER1Q8NEC5 780 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 RDH11Q8TC12 318 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 ING5Q8WYH8 240 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 STARD8Q92502 1023 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 CNBD2Q96M20 576 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 TM6SF2Q9BZW4 377 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 ZNF395Q9H8N7 513 aaPredicted RBP13.72□□□□□ -0.21
RNF43-202ENST00000577625 MARCH4Q9P2E8 410 aaPredicted RBP13.72□□□□□ -0.21
RNF43-202ENST00000577625 G3V2L1 256 aa13.71□□□□□ -0.21
RNF43-202ENST00000577625 SERPINA6P08185 405 aa13.71□□□□□ -0.21
RNF43-202ENST00000577625 RALBP11234 206 aa13.71□□□□□ -0.21
RNF43-202ENST00000577625 AOC1P19801 751 aa13.71□□□□□ -0.21
RNF43-202ENST00000577625 HLA-FP30511 346 aa13.71□□□□□ -0.21
RNF43-202ENST00000577625 HSPA13P48723 471 aa13.71□□□□□ -0.21
RNF43-202ENST00000577625 ARPC4P59998 168 aa13.71□□□□□ -0.21
RNF43-202ENST00000577625 PGM2L1Q6PCE3 622 aa13.71□□□□□ -0.21
RNF43-202ENST00000577625 TMEM126BQ8IUX1 230 aa13.71□□□□□ -0.21
RNF43-202ENST00000577625 ARID3BQ8IVW6 561 aaPredicted RBP13.71□□□□□ -0.21
RNF43-202ENST00000577625 MDGA1Q8NFP4 955 aa13.71□□□□□ -0.21
RNF43-202ENST00000577625 GPR150Q8NGU9 434 aa13.71□□□□□ -0.21
RNF43-202ENST00000577625 OMDQ99983 421 aa13.71□□□□□ -0.21
RNF43-202ENST00000577625 GPATCH1Q9BRR8 931 aaKnown RBP13.71□□□□□ -0.21
RNF43-202ENST00000577625 ADGRE3Q9BY15 652 aa13.71□□□□□ -0.21
RNF43-202ENST00000577625 TPK1Q9H3S4 243 aa13.71□□□□□ -0.21
RNF43-202ENST00000577625 ABCB8Q9NUT2 735 aa13.71□□□□□ -0.21
RNF43-202ENST00000577625 A0A087X1B8 175 aa13.71□□□□□ -0.22
RNF43-202ENST00000577625 PRR5-ARHGAP8B1AHC4 643 aa13.71□□□□□ -0.22
RNF43-202ENST00000577625 ANKRD66B4E2M5 251 aa13.71□□□□□ -0.22
RNF43-202ENST00000577625 GLP2RO95838 553 aa13.71□□□□□ -0.22
RNF43-202ENST00000577625 S1PR4O95977 384 aa13.71□□□□□ -0.22
RNF43-202ENST00000577625 GOT2P00505 430 aaKnown RBP13.71□□□□□ -0.22
RNF43-202ENST00000577625 CDH3P22223 829 aa13.71□□□□□ -0.22
RNF43-202ENST00000577625 PSMA3P25788 255 aa13.71□□□□□ -0.22
RNF43-202ENST00000577625 HMOX2P30519 316 aa13.71□□□□□ -0.22
RNF43-202ENST00000577625 PBX2P40425 430 aa13.71□□□□□ -0.22
RNF43-202ENST00000577625 SLC1A6P48664 564 aa13.71□□□□□ -0.22
RNF43-202ENST00000577625 SLC12A2P55011 1212 aa13.71□□□□□ -0.22
RNF43-202ENST00000577625 AP1S1P61966 158 aa13.71□□□□□ -0.22
RNF43-202ENST00000577625 ARHGAP8P85298 464 aa13.71□□□□□ -0.22
RNF43-202ENST00000577625 TAF1AQ15573 450 aaPredicted RBP13.71□□□□□ -0.22
RNF43-202ENST00000577625 ZNF829Q3KNS6 432 aaPredicted RBP13.71□□□□□ -0.22
RNF43-202ENST00000577625 PITRM1Q5JRX3 1037 aa13.71□□□□□ -0.22
RNF43-202ENST00000577625 RBM20Q5T481 1227 aaKnown RBP13.71□□□□□ -0.22
RNF43-202ENST00000577625 TMEM151AQ8N4L1 468 aa13.71□□□□□ -0.22
RNF43-202ENST00000577625 POU5F2Q8N7G0 328 aa13.71□□□□□ -0.22
RNF43-202ENST00000577625 DDHD1Q8NEL9 900 aa13.71□□□□□ -0.22
RNF43-202ENST00000577625 KCTD4Q8WVF5 259 aa13.71□□□□□ -0.22
RNF43-202ENST00000577625 CERS4Q9HA82 394 aa13.71□□□□□ -0.22
RNF43-202ENST00000577625 NLE1Q9NVX2 485 aaPredicted RBP13.71□□□□□ -0.22
RNF43-202ENST00000577625 PCDHGB4Q9UN71 923 aa13.71□□□□□ -0.22
RNF43-202ENST00000577625 PCDHGB5Q9Y5G0 923 aa13.71□□□□□ -0.22
RNF43-202ENST00000577625 HEMK1Q9Y5R4 338 aaPredicted RBP13.71□□□□□ -0.22
RNF43-202ENST00000577625 ZNF106Q9H2Y7 1883 aaKnown RBP13.7□□□□□ -0.22
RNF43-202ENST00000577625 FZD6O60353 706 aa13.7□□□□□ -0.22
RNF43-202ENST00000577625 KLHL2O95198 593 aa13.7□□□□□ -0.22
RNF43-202ENST00000577625 EIF2S1P05198 315 aaKnown RBP13.7□□□□□ -0.22
RNF43-202ENST00000577625 TCF3P15923 654 aa13.7□□□□□ -0.22
RNF43-202ENST00000577625 OGNP20774 298 aaKnown RBP13.7□□□□□ -0.22
RNF43-202ENST00000577625 ALDH3B2P48448 385 aa13.7□□□□□ -0.22
RNF43-202ENST00000577625 EIF2B2P49770 351 aaKnown RBP13.7□□□□□ -0.22
RNF43-202ENST00000577625 ZNF460Q14592 562 aa13.7□□□□□ -0.22
RNF43-202ENST00000577625 FUT11Q495W5 492 aa13.7□□□□□ -0.22
RNF43-202ENST00000577625 HSF5Q4G112 596 aaPredicted RBP13.7□□□□□ -0.22
RNF43-202ENST00000577625 RARS2Q5T160 578 aaKnown RBP13.7□□□□□ -0.22
RNF43-202ENST00000577625 ASTLQ6HA08 431 aaPredicted RBP13.7□□□□□ -0.22
RNF43-202ENST00000577625 MRNIPQ6NTE8 343 aa13.7□□□□□ -0.22
RNF43-202ENST00000577625 PAOXQ6QHF9 649 aa13.7□□□□□ -0.22
RNF43-202ENST00000577625 GLT6D1Q7Z4J2 308 aa13.7□□□□□ -0.22
RNF43-202ENST00000577625 LDB1Q86U70 411 aaPredicted RBP13.7□□□□□ -0.22
RNF43-202ENST00000577625 KBTBD6Q86V97 674 aa13.7□□□□□ -0.22
RNF43-202ENST00000577625 PQLC1Q8N2U9 271 aa13.7□□□□□ -0.22
RNF43-202ENST00000577625 PDCD6IPQ8WUM4 868 aaKnown RBP13.7□□□□□ -0.22
RNF43-202ENST00000577625 SREK1Q8WXA9 508 aaKnown RBP13.7□□□□□ -0.22
RNF43-202ENST00000577625 EME1Q96AY2 570 aa13.7□□□□□ -0.22
RNF43-202ENST00000577625 TSPAN17Q96FV3 270 aa13.7□□□□□ -0.22
RNF43-202ENST00000577625 CDKN2AIPNLQ96HQ2 116 aa13.7□□□□□ -0.22
RNF43-202ENST00000577625 HGH1Q9BTY7 390 aa13.7□□□□□ -0.22
RNF43-202ENST00000577625 LINC00597Q9H2U6 94 aa13.7□□□□□ -0.22
RNF43-202ENST00000577625 DPP7Q9UHL4 492 aa13.7□□□□□ -0.22
RNF43-202ENST00000577625 PSMD13Q9UNM6 376 aa13.7□□□□□ -0.22
RNF43-202ENST00000577625 RUVBL2Q9Y230 463 aaKnown RBP13.7□□□□□ -0.22
RNF43-202ENST00000577625 MEI4A8MW99 385 aa13.69□□□□□ -0.22
RNF43-202ENST00000577625 NEDD8-MDP1E9PL57 170 aa13.69□□□□□ -0.22
RNF43-202ENST00000577625 ZNF197O14709 1029 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms