RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 CEACAM5P06731 702 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 SYPP08247 313 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 ADRB1P08588 477 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 ENGP17813 658 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 PAMP19021 973 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 KELP23276 732 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 HTR1BP28222 390 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 MAGEA4P43358 317 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 ARCN1P48444 511 aaKnown RBP8.48□□□□□ -1.05
NUP88-211ENST00000575976 TUBB4BP68371 445 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 CUL1Q13616 776 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 SEMA3AQ14563 771 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 CRYMQ14894 314 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 CSRP2Q16527 193 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 ALG11Q2TAA5 492 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 GPR33Q49SQ1 333 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 FASTKD1Q53R41 847 aaKnown RBP8.48□□□□□ -1.05
NUP88-211ENST00000575976 SPANXN3Q5MJ09 141 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 MARK2Q7KZI7 788 aaKnown RBP8.48□□□□□ -1.05
NUP88-211ENST00000575976 TAS2R42Q7RTR8 314 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 ADGRG6Q86SQ4 1221 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 LDB1Q86U70 411 aaPredicted RBP8.48□□□□□ -1.05
NUP88-211ENST00000575976 SERPINA9Q86WD7 417 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 PHYKPLQ8IUZ5 450 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 CCNJLQ8IV13 435 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 UNC5BQ8IZJ1 945 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 NXPE1Q8N323 547 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.48□□□□□ -1.05
NUP88-211ENST00000575976 DDHD1Q8NEL9 900 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 OR56A4Q8NGH8 313 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 OR2I1PQ8NGU4 316 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 GDAP1Q8TB36 358 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 PYROXD1Q8WU10 500 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 OR1E3Q8WZA6 343 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 UBXN4Q92575 508 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 ULK4Q96C45 1275 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 CCDC97Q96F63 343 aaPredicted RBP8.48□□□□□ -1.05
NUP88-211ENST00000575976 SGSM3Q96HU1 749 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 C9orf72Q96LT7 481 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 FMO2Q99518 471 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 ELF4Q99607 663 aaPredicted RBP8.48□□□□□ -1.05
NUP88-211ENST00000575976 NAT9Q9BTE0 207 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 GTPBP2Q9BX10 602 aaKnown RBP8.48□□□□□ -1.05
NUP88-211ENST00000575976 FAM129AQ9BZQ8 928 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 ZDHHC5Q9C0B5 715 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 PHACTR1Q9C0D0 580 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 TCEAL2Q9H3H9 227 aaPredicted RBP8.48□□□□□ -1.05
NUP88-211ENST00000575976 ERVMER34-1Q9H9K5 563 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 FGF22Q9HCT0 170 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 RXFP3Q9NSD7 469 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 C20orf96Q9NUD7 363 aaPredicted RBP8.48□□□□□ -1.05
NUP88-211ENST00000575976 ZDHHC3Q9NYG2 299 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 MARCH4Q9P2E8 410 aaPredicted RBP8.48□□□□□ -1.05
NUP88-211ENST00000575976 ATXN10Q9UBB4 475 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 KLQ9UEF7 1012 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 KLF15Q9UIH9 416 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 MOSPD1Q9UJG1 213 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 PCYT1BQ9Y5K3 369 aaPredicted RBP8.48□□□□□ -1.05
NUP88-211ENST00000575976 GON4LQ3T8J9 2241 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 FRYLO94915 3013 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 A0A1B0GTQ1 180 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 LNP1A1A4G5 178 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 PRSS38A1L453 326 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 TNFRSF10CO14798 259 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 CD3EAPO15446 510 aaKnown RBP8.47□□□□□ -1.05
NUP88-211ENST00000575976 VEGFDO43915 354 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 DNAJC6O75061 913 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 CDK14O94921 469 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 RASGRP1O95267 797 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 TNFP01375 233 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 CSF2P04141 144 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 IVLP07476 585 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 MYBL2P10244 700 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 ZNF8P17098 575 aaPredicted RBP8.47□□□□□ -1.05
NUP88-211ENST00000575976 ACRV1P26436 265 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 SSTR1P30872 391 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 SRP54P61011 504 aaKnown RBP8.47□□□□□ -1.05
NUP88-211ENST00000575976 B4GALNT1Q00973 533 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 PPARDQ03181 441 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 TMEM115Q12893 351 aaPredicted RBP8.47□□□□□ -1.05
NUP88-211ENST00000575976 BNIP3Q12983 259 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 THOC5Q13769 683 aaKnown RBP8.47□□□□□ -1.05
NUP88-211ENST00000575976 SHBQ15464 509 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 DBN1Q16643 649 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 LONRF1Q17RB8 773 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 ZNF423Q2M1K9 1284 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 ERCC6LQ2NKX8 1250 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 HLA-BQ31612 363 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 LDLRAP1Q5SW96 308 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 STEAP4Q687X5 459 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 NEPROQ6NW34 567 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 TRMT10BQ6PF06 316 aaKnown RBP8.47□□□□□ -1.05
NUP88-211ENST00000575976 IL27RAQ6UWB1 636 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 PRR23CQ6ZRP0 262 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 CAPN12Q6ZSI9 719 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 RD3Q7Z3Z2 195 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 PARGQ86W56 976 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 HID1Q8IV36 788 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 PALM2Q8IXS6 379 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 GSPT2Q8IYD1 628 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms