RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.84□□□□□ -0.19
RPAIN-217ENST00000575711 HEXDCQ8WVB3 486 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 CFAP36Q96G28 342 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 DCUN1D1Q96GG9 259 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 FCRL3Q96P31 734 aaPredicted RBP13.84□□□□□ -0.19
RPAIN-217ENST00000575711 TTC1Q99614 292 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 COPS8Q99627 209 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 OR2AG1Q9H205 316 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 RMI1Q9H9A7 625 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 CARS2Q9HA77 564 aaKnown RBP13.84□□□□□ -0.19
RPAIN-217ENST00000575711 MRPL40Q9NQ50 206 aaKnown RBP13.84□□□□□ -0.19
RPAIN-217ENST00000575711 TM7SF3Q9NS93 570 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 RXFP3Q9NSD7 469 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 CATSPERZQ9NTU4 200 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 ZDHHC18Q9NUE0 388 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 DNAAF2Q9NVR5 837 aaKnown RBP13.84□□□□□ -0.19
RPAIN-217ENST00000575711 ATXN10Q9UBB4 475 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 ZC3H7BQ9UGR2 993 aaKnown RBP13.84□□□□□ -0.19
RPAIN-217ENST00000575711 APOBEC3BQ9UH17 382 aaKnown RBP13.84□□□□□ -0.19
RPAIN-217ENST00000575711 SUFUQ9UMX1 484 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 TEX264Q9Y6I9 313 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 ZNF106Q9H2Y7 1883 aaKnown RBP13.83□□□□□ -0.2
RPAIN-217ENST00000575711 ZCWPW2A0A1B0GU75 182 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 CFAP99D6REC4 459 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 CDX4O14627 284 aaPredicted RBP13.83□□□□□ -0.2
RPAIN-217ENST00000575711 CDK14O94921 469 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 ZNF883P0CG24 379 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 PRSS56P0CW18 603 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 CTSEP14091 401 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 ZNF8P17098 575 aaPredicted RBP13.83□□□□□ -0.2
RPAIN-217ENST00000575711 ACRV1P26436 265 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 ARNTP27540 789 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 EPHA8P29322 1005 aaPredicted RBP13.83□□□□□ -0.2
RPAIN-217ENST00000575711 CA5AP35218 305 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 PPARGP37231 505 aaPredicted RBP13.83□□□□□ -0.2
RPAIN-217ENST00000575711 GNPDA1P46926 289 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 CDKN1CP49918 316 aaPredicted RBP13.83□□□□□ -0.2
RPAIN-217ENST00000575711 IL9RQ01113 521 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 TMEM115Q12893 351 aaPredicted RBP13.83□□□□□ -0.2
RPAIN-217ENST00000575711 CRYMQ14894 314 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 SHBQ15464 509 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 LONRF1Q17RB8 773 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 KHDC1Q4VXA5 237 aaKnown RBP13.83□□□□□ -0.2
RPAIN-217ENST00000575711 SPANXN3Q5MJ09 141 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 MRNIPQ6NTE8 343 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 CERS6Q6ZMG9 384 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 CEP128Q6ZU80 1094 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 MICALCLQ6ZW33 695 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 SERPINA9Q86WD7 417 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 CCDC25Q86WR0 208 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 GALNT13Q8IUC8 556 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 ANKMY2Q8IV38 441 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 IGDCC3Q8IVU1 814 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 PIANPQ8IYJ0 282 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 KIAA2013Q8IYS2 634 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 RBFAQ8N0V3 343 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 OTUD6BQ8N6M0 293 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 FBXO36Q8NEA4 188 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 SCARF2Q96GP6 870 aaPredicted RBP13.83□□□□□ -0.2
RPAIN-217ENST00000575711 WDR83Q9BRX9 315 aaKnown RBP13.83□□□□□ -0.2
RPAIN-217ENST00000575711 SAYSD1Q9NPB0 183 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 ZDHHC3Q9NYG2 299 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 SPASTQ9UBP0 616 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 KLF15Q9UIH9 416 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 PNMA8BQ9ULN7 279 aaPredicted RBP13.83□□□□□ -0.2
RPAIN-217ENST00000575711 FAM169AQ9Y6X4 670 aa13.83□□□□□ -0.2
RPAIN-217ENST00000575711 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.82□□□□□ -0.2
RPAIN-217ENST00000575711 C4orf47A7E2U8 309 aa13.82□□□□□ -0.2
RPAIN-217ENST00000575711 CD3EAPO15446 510 aaKnown RBP13.82□□□□□ -0.2
RPAIN-217ENST00000575711 NUAK1O60285 661 aa13.82□□□□□ -0.2
RPAIN-217ENST00000575711 SDC3O75056 442 aa13.82□□□□□ -0.2
RPAIN-217ENST00000575711 DNAJC6O75061 913 aa13.82□□□□□ -0.2
RPAIN-217ENST00000575711 PIAS2O75928 621 aa13.82□□□□□ -0.2
RPAIN-217ENST00000575711 ARCN1P48444 511 aaKnown RBP13.82□□□□□ -0.2
RPAIN-217ENST00000575711 CARSP49589 748 aaKnown RBP13.82□□□□□ -0.2
RPAIN-217ENST00000575711 THOC5Q13769 683 aaKnown RBP13.82□□□□□ -0.2
RPAIN-217ENST00000575711 ITIH4Q14624 930 aa13.82□□□□□ -0.2
RPAIN-217ENST00000575711 FASTKD3Q14CZ7 662 aaKnown RBP13.82□□□□□ -0.2
RPAIN-217ENST00000575711 SUZ12Q15022 739 aaKnown RBP13.82□□□□□ -0.2
RPAIN-217ENST00000575711 DBN1Q16643 649 aa13.82□□□□□ -0.2
RPAIN-217ENST00000575711 PRRT3Q5FWE3 981 aa13.82□□□□□ -0.2
RPAIN-217ENST00000575711 KCTD16Q68DU8 428 aa13.82□□□□□ -0.2
RPAIN-217ENST00000575711 UNC5AQ6ZN44 842 aa13.82□□□□□ -0.2
RPAIN-217ENST00000575711 SDCCAG8Q86SQ7 713 aaPredicted RBP13.82□□□□□ -0.2
RPAIN-217ENST00000575711 CALML6Q8TD86 181 aa13.82□□□□□ -0.2
RPAIN-217ENST00000575711 LMX1AQ8TE12 382 aa13.82□□□□□ -0.2
RPAIN-217ENST00000575711 PYROXD1Q8WU10 500 aa13.82□□□□□ -0.2
RPAIN-217ENST00000575711 OR2M4Q96R27 311 aa13.82□□□□□ -0.2
RPAIN-217ENST00000575711 FMO2Q99518 471 aa13.82□□□□□ -0.2
RPAIN-217ENST00000575711 TSPYL1Q9H0U9 437 aa13.82□□□□□ -0.2
RPAIN-217ENST00000575711 TCEAL2Q9H3H9 227 aaPredicted RBP13.82□□□□□ -0.2
RPAIN-217ENST00000575711 C20orf96Q9NUD7 363 aaPredicted RBP13.82□□□□□ -0.2
RPAIN-217ENST00000575711 ZNHIT2Q9UHR6 403 aa13.82□□□□□ -0.2
RPAIN-217ENST00000575711 GPSM3Q9Y4H4 160 aa13.82□□□□□ -0.2
RPAIN-217ENST00000575711 PCDHGB2Q9Y5G2 931 aa13.82□□□□□ -0.2
RPAIN-217ENST00000575711 OTOGLQ3ZCN5 2332 aa13.82□□□□□ -0.2
RPAIN-217ENST00000575711 GOLGA8KD6RF30 607 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 GOLGA8TH3BQL2 631 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 SCAMP1O15126 338 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 PFDN6O15212 129 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms