RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 AGAP2Q99490 1192 aa13.43□□□□□ -0.26
NDE1-209ENST00000574109 ELF4Q99607 663 aaPredicted RBP13.43□□□□□ -0.26
NDE1-209ENST00000574109 SLC13A1Q9BZW2 595 aa13.43□□□□□ -0.26
NDE1-209ENST00000574109 ZDHHC3Q9NYG2 299 aa13.43□□□□□ -0.26
NDE1-209ENST00000574109 SLC2A6Q9UGQ3 507 aa13.43□□□□□ -0.26
NDE1-209ENST00000574109 COL5A1P20908 1838 aaPredicted RBP13.43□□□□□ -0.26
NDE1-209ENST00000574109 LNP1A1A4G5 178 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 INPP4BO15327 924 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 CD3EAPO15446 510 aaKnown RBP13.42□□□□□ -0.26
NDE1-209ENST00000574109 AP2A2O94973 939 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 ENGP17813 658 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 ARNTP27540 789 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 PMLP29590 882 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 ECHS1P30084 290 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 PHBP35232 272 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 NSG1P42857 185 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 ARCN1P48444 511 aaKnown RBP13.42□□□□□ -0.26
NDE1-209ENST00000574109 CARSP49589 748 aaKnown RBP13.42□□□□□ -0.26
NDE1-209ENST00000574109 HK3P52790 923 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 SRP54P61011 504 aaKnown RBP13.42□□□□□ -0.26
NDE1-209ENST00000574109 PTPRCAPQ14761 206 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 KIF19Q2TAC6 998 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 WDR93Q6P2C0 686 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 ENPP7Q6UWV6 458 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 LAYNQ6UX15 382 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 UNC5AQ6ZN44 842 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 PRR23CQ6ZRP0 262 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 CYS1Q717R9 158 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 TAS2R42Q7RTR8 314 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 GALNT7Q86SF2 657 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 GALNT13Q8IUC8 556 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 CNTN4Q8IWV2 1026 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 PALM2Q8IXS6 379 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 PHACTR4Q8IZ21 702 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 FSTL5Q8N475 847 aaPredicted RBP13.42□□□□□ -0.26
NDE1-209ENST00000574109 CDKL2Q92772 493 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 CFAP36Q96G28 342 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 TSSK1BQ9BXA7 367 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 C20orf96Q9NUD7 363 aaPredicted RBP13.42□□□□□ -0.26
NDE1-209ENST00000574109 INTS10Q9NVR2 710 aaKnown RBP13.42□□□□□ -0.26
NDE1-209ENST00000574109 TRNAU1APQ9NX07 287 aaKnown RBP13.42□□□□□ -0.26
NDE1-209ENST00000574109 APOBEC3BQ9UH17 382 aaKnown RBP13.42□□□□□ -0.26
NDE1-209ENST00000574109 CNOT6Q9ULM6 557 aaKnown RBP13.42□□□□□ -0.26
NDE1-209ENST00000574109 GPR34Q9UPC5 381 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 USP34Q70CQ2 3546 aa13.42□□□□□ -0.26
NDE1-209ENST00000574109 ARHGEF17Q96PE2 2063 aaPredicted RBP13.41□□□□□ -0.26
NDE1-209ENST00000574109 A0A1B0GTQ1 180 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 PATE3B3GLJ2 98 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 CCL22O00626 93 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 NUAK1O60285 661 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 KCNJ13O60928 360 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 BANF1O75531 89 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 CDK14O94921 469 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 ASMTLO95671 621 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 TNFP01375 233 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 ZNF7P17097 686 aaPredicted RBP13.41□□□□□ -0.26
NDE1-209ENST00000574109 VCLP18206 1134 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 MAGEA4P43358 317 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 ADARP55265 1226 aaKnown RBP13.41□□□□□ -0.26
NDE1-209ENST00000574109 SPEM2Q0P670 501 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 NAB1Q13506 487 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 FASTKD3Q14CZ7 662 aaKnown RBP13.41□□□□□ -0.26
NDE1-209ENST00000574109 ELOCQ15369 112 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 DBN1Q16643 649 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 ALG11Q2TAA5 492 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 AASDHQ4L235 1098 aaPredicted RBP13.41□□□□□ -0.26
NDE1-209ENST00000574109 ZNF470Q6ECI4 717 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 PSAPL1Q6NUJ1 521 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 NEPROQ6NW34 567 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 LRRTM4Q86VH4 590 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 SERPINA9Q86WD7 417 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 SPATS2Q86XZ4 545 aaKnown RBP13.41□□□□□ -0.26
NDE1-209ENST00000574109 CILP2Q8IUL8 1156 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 ANKMY2Q8IV38 441 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 PDXPQ96GD0 296 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 OR2M4Q96R27 311 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 WDR83Q9BRX9 315 aaKnown RBP13.41□□□□□ -0.26
NDE1-209ENST00000574109 TIMM29Q9BSF4 260 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 EDEM2Q9BV94 578 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 LGR4Q9BXB1 951 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 SUDS3Q9H7L9 328 aaPredicted RBP13.41□□□□□ -0.26
NDE1-209ENST00000574109 ANKZF1Q9H8Y5 726 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 FGF22Q9HCT0 170 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 DNAJC28Q9NX36 388 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 ZFATQ9P243 1243 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 SPASTQ9UBP0 616 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 CORO1CQ9ULV4 474 aaPredicted RBP13.41□□□□□ -0.26
NDE1-209ENST00000574109 NFU1Q9UMS0 254 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 PCDHB1Q9Y5F3 818 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 PCDHGB2Q9Y5G2 931 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 SNX11Q9Y5W9 270 aa13.41□□□□□ -0.26
NDE1-209ENST00000574109 TMEM202A6NGA9 273 aa13.4□□□□□ -0.26
NDE1-209ENST00000574109 H3BMM5 538 aa13.4□□□□□ -0.26
NDE1-209ENST00000574109 CHUKO15111 745 aa13.4□□□□□ -0.26
NDE1-209ENST00000574109 KMOO15229 486 aa13.4□□□□□ -0.26
NDE1-209ENST00000574109 UGT1A9O60656 530 aa13.4□□□□□ -0.26
NDE1-209ENST00000574109 NDUFS3O75489 264 aa13.4□□□□□ -0.26
NDE1-209ENST00000574109 CEACAM5P06731 702 aa13.4□□□□□ -0.26
NDE1-209ENST00000574109 JUNDP17535 347 aa13.4□□□□□ -0.26
NDE1-209ENST00000574109 UGT1A6P19224 532 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms