RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 ZFAND4Q86XD8 727 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 TRIM48Q8IWZ4 208 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 RCOR2Q8IZ40 523 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 SFRP1Q8N474 314 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 SLC25A41Q8N5S1 370 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 ZSCAN1Q8NBB4 408 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 LSM14AQ8ND56 463 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 AGBL5Q8NDL9 886 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 IPMKQ8NFU5 416 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 BLOC1S5Q8TDH9 187 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 HTR3CQ8WXA8 447 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 NCSTNQ92542 709 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 GLYATL1Q969I3 302 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 SH3KBP1Q96B97 665 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 EID2BQ96D98 161 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 TTC25Q96NG3 672 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 QKIQ96PU8 341 aaKnown RBP eCLIP9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 SRPK1Q96SB4 655 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 HEMGNQ9BXL5 484 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 SARS2Q9NP81 518 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 TMEM9Q9P0T7 183 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 KLHL3Q9UH77 587 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 DNAJC16Q9Y2G8 782 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 SPO11Q9Y5K1 396 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 KIR2DS5A0A0G2JLQ3 304 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 A0A0G2JNG1 304 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 SOWAHDA6NJG2 315 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 EFCAB7A8K855 629 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 HACD1B0YJ81 288 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 GPR89AB7ZAQ6 455 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 C9orf172C9J069 976 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 STMND1H3BQB6 276 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 APOC4-APOC2K7ER74 178 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 KIR2DS3K7RE56 304 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 AURKAO14965 403 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 KMOO15229 486 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 CDK14O94921 469 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 LCA5LO95447 670 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 APOC2P02655 101 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 PTMAP06454 111 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 GPR89BP0CG08 455 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 BPIP17213 487 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 CD82P27701 267 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 CD68P34810 354 aaPredicted RBP9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 ATP1A2P50993 1020 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 ZNF75DP51815 510 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 WNT3AP56704 352 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 CFHR1Q03591 330 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 ADCY2Q08462 1091 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 WASHC5Q12768 1159 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 SRSF6Q13247 344 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 LY6DQ14210 128 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 KIR2DS5Q14953 304 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 NOMO1Q15155 1222 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 PPP2R5EQ16537 467 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 SIRPB2Q5JXA9 342 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 TMEM71Q6P5X7 295 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 ADGRG6Q86SQ4 1221 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 TRAPPC5Q8IUR0 188 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 ZNF567Q8N184 647 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 AVL9Q8NBF6 648 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 JPH3Q8WXH2 748 aaPredicted RBP9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 KRT35Q92764 455 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 ART4Q93070 314 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 PLEKHG4BQ96PX9 1271 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 TAAR9Q96RI9 348 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 VAT1Q99536 393 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 ARHGAP9Q9BRR9 750 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 TRIM39Q9HCM9 518 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 PRDM8Q9NQV8 689 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 SLC39A1Q9NY26 324 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 HACD3Q9P035 362 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 NFKBIL1Q9UBC1 381 aaPredicted RBP9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 ACSL6Q9UKU0 697 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 PKP3Q9Y446 797 aa9.53□□□□□ -0.88
NPLOC4-212ENST00000573328 PIEZO2Q9H5I5 2752 aa9.52□□□□□ -0.88
NPLOC4-212ENST00000573328 PIKFYVEQ9Y2I7 2098 aa9.52□□□□□ -0.88
NPLOC4-212ENST00000573328 OR5K4A6NMS3 321 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 VEGFDO43915 354 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 C1QL1O75973 258 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 STK10O94804 968 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 NDUFA10O95299 355 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 VIPP01282 170 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 FGF3P11487 239 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 ZNF7P17097 686 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 VCLP18206 1134 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 HLA-DPA1P20036 260 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 SPAM1P38567 509 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 CETN2P41208 172 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 CHRNA4P43681 627 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 MPP3Q13368 585 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 TAZQ16635 292 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 ATP13A5Q4VNC0 1218 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 ITPRIPL1Q6GPH6 555 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 IYDQ6PHW0 289 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 KDELC1Q6UW63 502 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 FAM151BQ6UXP7 276 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 BBS12Q6ZW61 710 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms