RNA–Protein interactions for RNA: ENST00000573108.1

TRIM25-207, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 952 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-207ENST00000573108 CNOT6Q9ULM6 557 aaKnown RBP11.94□□□□□ -0.5
TRIM25-207ENST00000573108 KCNK6Q9Y257 313 aa11.94□□□□□ -0.5
TRIM25-207ENST00000573108 CHKBQ9Y259 395 aa11.94□□□□□ -0.5
TRIM25-207ENST00000573108 MRPS18BQ9Y676 258 aaKnown RBP11.94□□□□□ -0.5
TRIM25-207ENST00000573108 ZNF106Q9H2Y7 1883 aaKnown RBP11.93□□□□□ -0.5
TRIM25-207ENST00000573108 A0A0A6YYK5 440 aaPredicted RBP11.93□□□□□ -0.5
TRIM25-207ENST00000573108 LRRD1A4D1F6 860 aa11.93□□□□□ -0.5
TRIM25-207ENST00000573108 A6NCN8 305 aa11.93□□□□□ -0.5
TRIM25-207ENST00000573108 FADS2P1A8MWK0 482 aa11.93□□□□□ -0.5
TRIM25-207ENST00000573108 SNX2O60749 519 aa11.93□□□□□ -0.5
TRIM25-207ENST00000573108 STK17BO94768 372 aa11.93□□□□□ -0.5
TRIM25-207ENST00000573108 PRLP01236 227 aa11.93□□□□□ -0.5
TRIM25-207ENST00000573108 ACP5P13686 325 aa11.93□□□□□ -0.5
TRIM25-207ENST00000573108 F8A1P23610 371 aa11.93□□□□□ -0.5
TRIM25-207ENST00000573108 SERPINB6P35237 376 aa11.93□□□□□ -0.5
TRIM25-207ENST00000573108 SLC1A1P43005 524 aa11.93□□□□□ -0.5
TRIM25-207ENST00000573108 EPHB1P54762 984 aa11.93□□□□□ -0.5
TRIM25-207ENST00000573108 GALNT2Q10471 571 aa11.93□□□□□ -0.5
TRIM25-207ENST00000573108 FAM182AQ5T1J6 154 aa11.93□□□□□ -0.5
TRIM25-207ENST00000573108 LRRC38Q5VT99 294 aa11.93□□□□□ -0.5
TRIM25-207ENST00000573108 C16orf46Q6P387 395 aa11.93□□□□□ -0.5
TRIM25-207ENST00000573108 IYDQ6PHW0 289 aa11.93□□□□□ -0.5
TRIM25-207ENST00000573108 NDUFAF2Q8N183 169 aa11.93□□□□□ -0.5
TRIM25-207ENST00000573108 ACRBPQ8NEB7 543 aa11.93□□□□□ -0.5
TRIM25-207ENST00000573108 STARD8Q92502 1023 aa11.93□□□□□ -0.5
TRIM25-207ENST00000573108 KIAA1143Q96AT1 154 aaPredicted RBP11.93□□□□□ -0.5
TRIM25-207ENST00000573108 TDRD1Q9BXT4 1180 aaKnown RBP11.93□□□□□ -0.5
TRIM25-207ENST00000573108 POLR1EQ9GZS1 481 aaKnown RBP11.93□□□□□ -0.5
TRIM25-207ENST00000573108 ANAPC2Q9UJX6 822 aa11.93□□□□□ -0.5
TRIM25-207ENST00000573108 TMEM184BQ9Y519 407 aaPredicted RBP11.93□□□□□ -0.5
TRIM25-207ENST00000573108 A0A0U1RQJ8 604 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 CLEC18AA5D8T8 446 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 SPOPO43791 374 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 DLGAP3O95886 979 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 PYGLP06737 847 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 GARSP41250 739 aaKnown RBP11.92□□□□□ -0.5
TRIM25-207ENST00000573108 GFERP55789 205 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 NIPAL4Q0D2K0 466 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 ABHD18Q0P651 414 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 LLGL1Q15334 1064 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 ALG1LQ6GMV1 187 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 MFSD7Q6UXD7 560 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 CLEC18BQ6UXF7 455 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 KDELC2Q7Z4H8 507 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 LRRC49Q8IUZ0 686 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 RHOT1Q8IXI2 618 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 PLD5Q8N7P1 536 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 CLEC18CQ8NCF0 446 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 LPCAT1Q8NF37 534 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 ARRDC2Q8TBH0 407 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 TSGA13Q96PP4 275 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 ZPBPQ9BS86 351 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 ARFGAP3Q9NP61 516 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 PRDM8Q9NQV8 689 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 SIDT1Q9NXL6 827 aaKnown RBP11.92□□□□□ -0.5
TRIM25-207ENST00000573108 DTLQ9NZJ0 730 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 VPS18Q9P253 973 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 PLAAQ9Y263 795 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 TTLL3Q9Y4R7 772 aa11.92□□□□□ -0.5
TRIM25-207ENST00000573108 ZNF487B1APH4 448 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 K7EM74 188 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 POLR1CO15160 346 aaPredicted RBP11.91□□□□□ -0.5
TRIM25-207ENST00000573108 MATN3O15232 486 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 KRT1P04264 644 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 HLA-DQB2P05538 268 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 F3P13726 295 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 ZNF28P17035 718 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 TCN2P20062 427 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 NR1D1P20393 614 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 CCNCP24863 283 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 STAT5AP42229 794 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 MARCKSL1P49006 195 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 SPINT3P49223 89 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 EPHA4P54764 986 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 TAZQ16635 292 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 IFI16Q16666 785 aaKnown RBP11.91□□□□□ -0.5
TRIM25-207ENST00000573108 ZNF648Q5T619 568 aaPredicted RBP11.91□□□□□ -0.5
TRIM25-207ENST00000573108 HENMT1Q5T8I9 393 aaKnown RBP11.91□□□□□ -0.5
TRIM25-207ENST00000573108 SLC9A4Q6AI14 798 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 NPNTQ6UXI9 565 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 LYSMD3Q7Z3D4 306 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 SLC9B2Q86UD5 537 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 VSIG1Q86XK7 387 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 APOBEC4Q8WW27 367 aaKnown RBP11.91□□□□□ -0.5
TRIM25-207ENST00000573108 MAML1Q92585 1016 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 HERPUD2Q9BSE4 406 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 EFHD1Q9BUP0 239 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 STN1Q9H668 368 aaKnown RBP11.91□□□□□ -0.5
TRIM25-207ENST00000573108 PCDH9Q9HC56 1237 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 RBM22Q9NW64 420 aaKnown RBP eCLIP11.91□□□□□ -0.5
TRIM25-207ENST00000573108 DDX56Q9NY93 547 aaKnown RBP11.91□□□□□ -0.5
TRIM25-207ENST00000573108 OGFRQ9NZT2 677 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 SCHIP1Q9P0W5 487 aaPredicted RBP11.91□□□□□ -0.5
TRIM25-207ENST00000573108 CPNE7Q9UBL6 633 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 TP53TG5Q9Y2B4 290 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 HEY1Q9Y5J3 304 aa11.91□□□□□ -0.5
TRIM25-207ENST00000573108 MN1Q10571 1320 aaPredicted RBP11.9□□□□□ -0.5
TRIM25-207ENST00000573108 C1orf232A0A0U1RR37 186 aa11.9□□□□□ -0.5
TRIM25-207ENST00000573108 PRR19A6NJB7 356 aa11.9□□□□□ -0.5
TRIM25-207ENST00000573108 BTNL10A8MVZ5 291 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms