RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 YY1AP1Q9H869 796 aa16.09■□□□□ 0.17
RAB40B-206ENST00000571995 PRDM16Q9HAZ2 1276 aa16.09■□□□□ 0.17
RAB40B-206ENST00000571995 SLCO3A1Q9UIG8 710 aa16.09■□□□□ 0.17
RAB40B-206ENST00000571995 SYCE1LA8MT33 242 aa16.08■□□□□ 0.17
RAB40B-206ENST00000571995 INPPL1O15357 1258 aa16.08■□□□□ 0.17
RAB40B-206ENST00000571995 AQP1P29972 269 aa16.08■□□□□ 0.17
RAB40B-206ENST00000571995 APLP1P51693 650 aa16.08■□□□□ 0.17
RAB40B-206ENST00000571995 TRAF2Q12933 501 aa16.08■□□□□ 0.17
RAB40B-206ENST00000571995 AP1ARQ63HQ0 302 aa16.08■□□□□ 0.17
RAB40B-206ENST00000571995 UGT3A1Q6NUS8 523 aa16.08■□□□□ 0.17
RAB40B-206ENST00000571995 ISCA2Q86U28 154 aa16.08■□□□□ 0.17
RAB40B-206ENST00000571995 APCDD1Q8J025 514 aa16.08■□□□□ 0.17
RAB40B-206ENST00000571995 PPP1R2P1Q96PQ5 205 aa16.08■□□□□ 0.17
RAB40B-206ENST00000571995 ALG2Q9H553 416 aa16.08■□□□□ 0.17
RAB40B-206ENST00000571995 PARVBQ9HBI1 364 aa16.08■□□□□ 0.17
RAB40B-206ENST00000571995 IGSF5Q9NSI5 407 aa16.08■□□□□ 0.17
RAB40B-206ENST00000571995 GID8Q9NWU2 228 aa16.08■□□□□ 0.17
RAB40B-206ENST00000571995 SCHIP1Q9P0W5 487 aaPredicted RBP16.08■□□□□ 0.17
RAB40B-206ENST00000571995 VPS4AQ9UN37 437 aa16.08■□□□□ 0.17
RAB40B-206ENST00000571995 LZTS1Q9Y250 596 aa16.08■□□□□ 0.17
RAB40B-206ENST00000571995 RBBP6Q7Z6E9 1792 aaKnown RBP16.08■□□□□ 0.16
RAB40B-206ENST00000571995 CDK14O94921 469 aa16.08■□□□□ 0.16
RAB40B-206ENST00000571995 NR4A1P22736 598 aa16.08■□□□□ 0.16
RAB40B-206ENST00000571995 KPNA1P52294 538 aaPredicted RBP16.08■□□□□ 0.16
RAB40B-206ENST00000571995 UFM1P61960 85 aa16.08■□□□□ 0.16
RAB40B-206ENST00000571995 SQLEQ14534 574 aa16.08■□□□□ 0.16
RAB40B-206ENST00000571995 KDELC1Q6UW63 502 aa16.08■□□□□ 0.16
RAB40B-206ENST00000571995 TMEM207Q6UWW9 146 aa16.08■□□□□ 0.16
RAB40B-206ENST00000571995 GPRIN3Q6ZVF9 776 aa16.08■□□□□ 0.16
RAB40B-206ENST00000571995 MRPL10Q7Z7H8 261 aaKnown RBP16.08■□□□□ 0.16
RAB40B-206ENST00000571995 STK32CQ86UX6 486 aa16.08■□□□□ 0.16
RAB40B-206ENST00000571995 PGAM4Q8N0Y7 254 aa16.08■□□□□ 0.16
RAB40B-206ENST00000571995 RNF217Q8TC41 542 aa16.08■□□□□ 0.16
RAB40B-206ENST00000571995 LINC01599Q8WXQ3 324 aa16.08■□□□□ 0.16
RAB40B-206ENST00000571995 LIN28AQ9H9Z2 209 aaKnown RBP16.08■□□□□ 0.16
RAB40B-206ENST00000571995 RIC8BQ9NVN3 520 aa16.08■□□□□ 0.16
RAB40B-206ENST00000571995 LIMD1Q9UGP4 676 aa16.08■□□□□ 0.16
RAB40B-206ENST00000571995 SLC8A2Q9UPR5 921 aa16.08■□□□□ 0.16
RAB40B-206ENST00000571995 ANKRD66B4E2M5 251 aa16.08■□□□□ 0.16
RAB40B-206ENST00000571995 RNASEH2AO75792 299 aaKnown RBP16.08■□□□□ 0.16
RAB40B-206ENST00000571995 KLKB1P03952 638 aa16.08■□□□□ 0.16
RAB40B-206ENST00000571995 ATF6P18850 670 aa16.08■□□□□ 0.16
RAB40B-206ENST00000571995 YAP1P46937 504 aaKnown RBP16.08■□□□□ 0.16
RAB40B-206ENST00000571995 YBEYP58557 167 aaPredicted RBP16.08■□□□□ 0.16
RAB40B-206ENST00000571995 AFTPHQ6ULP2 937 aa16.08■□□□□ 0.16
RAB40B-206ENST00000571995 Q6ZVU0 165 aa16.08■□□□□ 0.16
RAB40B-206ENST00000571995 CHST15Q7LFX5 561 aaPredicted RBP16.08■□□□□ 0.16
RAB40B-206ENST00000571995 FAM47BQ8NA70 645 aa16.08■□□□□ 0.16
RAB40B-206ENST00000571995 FEM1CQ96JP0 617 aa16.08■□□□□ 0.16
RAB40B-206ENST00000571995 FAR2Q96K12 515 aa16.08■□□□□ 0.16
RAB40B-206ENST00000571995 RUBCNLQ9H714 662 aa16.08■□□□□ 0.16
RAB40B-206ENST00000571995 IPPKQ9H8X2 491 aa16.08■□□□□ 0.16
RAB40B-206ENST00000571995 OPTCQ9UBM4 332 aa16.08■□□□□ 0.16
RAB40B-206ENST00000571995 NOL3O60936 208 aaKnown RBP16.07■□□□□ 0.16
RAB40B-206ENST00000571995 CALRP27797 417 aaKnown RBP16.07■□□□□ 0.16
RAB40B-206ENST00000571995 PRKAA2P54646 552 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 TUBB3Q13509 450 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 RBM44Q6ZP01 1051 aaKnown RBP16.07■□□□□ 0.16
RAB40B-206ENST00000571995 OR56A4Q8NGH8 313 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 MYO19Q96H55 970 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 PAWRQ96IZ0 340 aaKnown RBP16.07■□□□□ 0.16
RAB40B-206ENST00000571995 SLC30A3Q99726 388 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 STN1Q9H668 368 aaKnown RBP16.07■□□□□ 0.16
RAB40B-206ENST00000571995 TMEM248Q9NWD8 314 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 PRMT5O14744 637 aaPredicted RBP16.07■□□□□ 0.16
RAB40B-206ENST00000571995 UNC50Q53HI1 259 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 METTL21CQ5VZV1 264 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 CBR4Q8N4T8 237 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 SCAMP4Q969E2 229 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 PGAP3Q96FM1 320 aaPredicted RBP16.07■□□□□ 0.16
RAB40B-206ENST00000571995 MPP4Q96JB8 637 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 OSGEPL1Q9H4B0 414 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 PDP2Q9P2J9 529 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 A0A1B0GTL3 188 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 ZNF840PA6NDX5 716 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 STC2O76061 302 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 C8AP07357 584 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 CHN2P52757 468 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 MTTPP55157 894 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 ACOX1Q15067 660 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 SAMD4BQ5PRF9 694 aaKnown RBP16.07■□□□□ 0.16
RAB40B-206ENST00000571995 BBS7Q8IWZ6 715 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 SYTL1Q8IYJ3 562 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 UMODL1-AS1Q8N2C9 162 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 BEND7Q8N7W2 519 aaPredicted RBP16.07■□□□□ 0.16
RAB40B-206ENST00000571995 PHC3Q8NDX5 983 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 MKS1Q9NXB0 559 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 SPASTQ9UBP0 616 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 FAF1Q9UNN5 650 aaPredicted RBP16.07■□□□□ 0.16
RAB40B-206ENST00000571995 USP22Q9UPT9 525 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 DNAJC15Q9Y5T4 150 aa16.07■□□□□ 0.16
RAB40B-206ENST00000571995 PRORSD1PA6NEY8 169 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 LDB2O43679 373 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 PRAMEF11O60813 436 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 OAZ2O95190 189 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 SBK3P0C264 359 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 COL6A2P12110 1019 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 TTPAP49638 278 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 NTHL1P78549 312 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 DEFB103AP81534 67 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms