RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 LTB4R2Q9NPC1 389 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 TLR9Q9NR96 1032 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 LEF1Q9UJU2 399 aaPredicted RBP17.33■□□□□ 0.36
SCARF1-205ENST00000571272 CORINQ9Y5Q5 1042 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 NPEPPSL1A6NEC2 478 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 MUSKO15146 869 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 KERAO60938 352 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 CBFA2T3O75081 653 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 EEDO75530 441 aaKnown RBP17.32■□□□□ 0.36
SCARF1-205ENST00000571272 TBX18O95935 607 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 OCM2P0CE71 109 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 OCMP0CE72 109 aaPredicted RBP17.32■□□□□ 0.36
SCARF1-205ENST00000571272 TCF3P15923 654 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 RPL9P32969 192 aaKnown RBP17.32■□□□□ 0.36
SCARF1-205ENST00000571272 ARL1P40616 181 aaPredicted RBP17.32■□□□□ 0.36
SCARF1-205ENST00000571272 RBBP7Q16576 425 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 MS4A13Q5J8X5 152 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 COLGALT2Q8IYK4 626 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 PAPD5Q8NDF8 572 aaKnown RBP17.32■□□□□ 0.36
SCARF1-205ENST00000571272 PDZD8Q8NEN9 1154 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 OSCP1Q8WVF1 389 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 IGSF8Q969P0 613 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 NSMCE2Q96MF7 247 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 ZNF599Q96NL3 588 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 SUN2Q9UH99 717 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 RPP40O75818 363 aaKnown RBP17.32■□□□□ 0.36
SCARF1-205ENST00000571272 HMBSP08397 361 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 UMPSP11172 480 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 MTPNP58546 118 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 TSPY1Q01534 308 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 MSANTD2Q6P1R3 559 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 DCDC5Q6ZRR9 648 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 SPATA19Q7Z5L4 167 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 STK32CQ86UX6 486 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 CLEC4FQ8N1N0 589 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 FNDC5Q8NAU1 212 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 TTC16Q8NEE8 873 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 OR13F1Q8NGS4 319 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 CDK15Q96Q40 435 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 HGH1Q9BTY7 390 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 ARMC7Q9H6L4 198 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 NTN4Q9HB63 628 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 C8orf4Q9NR00 106 aa17.32■□□□□ 0.36
SCARF1-205ENST00000571272 RGS17Q9UGC6 210 aaPredicted RBP17.32■□□□□ 0.36
SCARF1-205ENST00000571272 KANSL1LA0AUZ9 987 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 WASH4PA8MWX3 477 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 BTN3A1O00481 513 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 VPS4BO75351 444 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 RHOQP17081 205 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 NR4A1P22736 598 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 ACVRL1P37023 503 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 GPR15P49685 360 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 SUOXP51687 545 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 STC1P52823 247 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 SELPLGQ14242 412 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 AAK1Q2M2I8 961 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 SETMARQ53H47 684 aaPredicted RBP17.31■□□□□ 0.36
SCARF1-205ENST00000571272 RAP1GAP2Q684P5 730 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 CENPSQ8N2Z9 138 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 SLC15A4Q8N697 577 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 SNX19Q92543 992 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 MUC13Q9H3R2 512 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 ABI2Q9NYB9 513 aaPredicted RBP17.31■□□□□ 0.36
SCARF1-205ENST00000571272 FLRT1Q9NZU1 646 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 FNDC3AQ9Y2H6 1198 aaKnown RBP17.31■□□□□ 0.36
SCARF1-205ENST00000571272 MED16Q9Y2X0 877 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 COQ6Q9Y2Z9 468 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 ASB1Q9Y576 335 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 PCDHGA11Q9Y5H2 935 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 C1orf232A0A0U1RR37 186 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 K7EPI3 171 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 M0QZ92 97 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 SYNCRIPO60506 623 aaKnown RBP17.31■□□□□ 0.36
SCARF1-205ENST00000571272 PRR35P0CG20 571 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 CD97P48960 835 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 ARSFP54793 590 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 TBX4P57082 545 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 EEFSECP57772 596 aaKnown RBP17.31■□□□□ 0.36
SCARF1-205ENST00000571272 MRPS6P82932 125 aaKnown RBP17.31■□□□□ 0.36
SCARF1-205ENST00000571272 EFEMP1Q12805 493 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 BFSP2Q13515 415 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 DDR2Q16832 855 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 ZNF773Q6PK81 442 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 CD300LGQ6UXG3 332 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 MIB1Q86YT6 1006 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 CDYL2Q8N8U2 506 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 BRI3BPQ8WY22 251 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 TMBIM1Q969X1 311 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 C1orf74Q96LT6 269 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 GLT1D1Q96MS3 346 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 GPR21Q99679 349 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 PRDM5Q9NQX1 630 aaPredicted RBP17.31■□□□□ 0.36
SCARF1-205ENST00000571272 SELENONQ9NZV5 590 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 ACTL7AQ9Y615 435 aa17.31■□□□□ 0.36
SCARF1-205ENST00000571272 IL7RP16871 459 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 IST1P53990 364 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 MOGQ16653 247 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 GALNT18Q6P9A2 607 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 TERB1Q8NA31 727 aa17.3■□□□□ 0.36
SCARF1-205ENST00000571272 PROKR1Q8TCW9 393 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms