RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 TRIM23P36406 574 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 GCLMP48507 274 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 ARF5P84085 180 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 PDE1BQ01064 536 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 ELP6Q0PNE2 266 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 EIF4EBP2Q13542 120 aaPredicted RBP6.82□□□□□ -1.32
CHD3-213ENST00000571249 ZNF169Q14929 603 aaPredicted RBP6.82□□□□□ -1.32
CHD3-213ENST00000571249 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.82□□□□□ -1.324e-7■■■□□ 17.3
CHD3-213ENST00000571249 C5orf22Q49AR2 442 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 PDLIM3Q53GG5 364 aaPredicted RBP6.82□□□□□ -1.32
CHD3-213ENST00000571249 CES4AQ5XG92 561 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 SETD3Q86TU7 594 aaPredicted RBP6.82□□□□□ -1.32
CHD3-213ENST00000571249 PLXDC1Q8IUK5 500 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 PELI3Q8N2H9 469 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 ENDOVQ8N8Q3 282 aaKnown RBP6.82□□□□□ -1.32
CHD3-213ENST00000571249 CATSPER1Q8NEC5 780 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 SLC37A2Q8TED4 501 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 MR1Q95460 341 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 MBD6Q96DN6 1003 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 HMCESQ96FZ2 354 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 EEF2KMTQ96G04 330 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 CCDC34Q96HJ3 373 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 MAGEB10Q96LZ2 347 aaPredicted RBP6.82□□□□□ -1.32
CHD3-213ENST00000571249 AGAP3Q96P47 875 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 POLDIP3Q9BY77 421 aaKnown RBP6.82□□□□□ -1.32
CHD3-213ENST00000571249 SIK2Q9H0K1 926 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 CHST8Q9H2A9 424 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 WDR26Q9H7D7 661 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 MMRN2Q9H8L6 949 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 FAM204AQ9H8W3 233 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 ATP13A1Q9HD20 1204 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 RRAGDQ9NQL2 400 aaPredicted RBP6.82□□□□□ -1.32
CHD3-213ENST00000571249 C1GALT1Q9NS00 363 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 LRFN1Q9P244 771 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 CGNQ9P2M7 1197 aaKnown RBP6.82□□□□□ -1.32
CHD3-213ENST00000571249 ZNHIT2Q9UHR6 403 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 SUFUQ9UMX1 484 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 ZKSCAN5Q9Y2L8 839 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 SEC16AO15027 2179 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 A0A0G2JK05 382 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 SMTNL1A8MU46 457 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 POLR2DO15514 142 aaKnown RBP6.81□□□□□ -1.32
CHD3-213ENST00000571249 KLHL41O60662 606 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 IPO13O94829 963 aaKnown RBP6.81□□□□□ -1.32
CHD3-213ENST00000571249 EML2O95834 649 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 CD160O95971 181 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 MYL1P05976 194 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 VDRP11473 427 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 OR1E1P30953 314 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 CCR1P32246 355 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 ADCY8P40145 1251 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 STAT6P42226 847 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 ZNF75DP51815 510 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 SNRPD1P62314 119 aaKnown RBP6.81□□□□□ -1.32
CHD3-213ENST00000571249 HHEXQ03014 270 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 CBLBQ13191 982 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 POLD3Q15054 466 aaPredicted RBP6.81□□□□□ -1.32
CHD3-213ENST00000571249 PRKD1Q15139 912 aaPredicted RBP6.81□□□□□ -1.32
CHD3-213ENST00000571249 DEFB113Q30KQ7 82 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 DPCR1Q3MIW9 517 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 ATXN7L2Q5T6C5 722 aaPredicted RBP6.81□□□□□ -1.32
CHD3-213ENST00000571249 IZUMO3Q5VZ72 239 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 PODNL1Q6PEZ8 512 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 LCLAT1Q6UWP7 414 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 TFAP2DQ7Z6R9 452 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 DMRTC2Q8IXT2 367 aaPredicted RBP6.81□□□□□ -1.32
CHD3-213ENST00000571249 GUF1Q8N442 669 aaKnown RBP6.81□□□□□ -1.32
CHD3-213ENST00000571249 SFRP1Q8N474 314 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 IQUBQ8NA54 791 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 MLKLQ8NB16 471 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 SLC38A9Q8NBW4 561 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 OR2AP1Q8NGE2 309 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 NR4A3Q92570 626 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 ISG20Q96AZ6 181 aaKnown RBP6.81□□□□□ -1.32
CHD3-213ENST00000571249 HSFY1Q96LI6 401 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 TBC1D10AQ9BXI6 508 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 SUV39H2Q9H5I1 410 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 MPP6Q9NZW5 540 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 TCFL5Q9UL49 500 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 LUC7L2Q9Y383 392 aaKnown RBP6.81□□□□□ -1.32
CHD3-213ENST00000571249 SNX10Q9Y5X0 201 aa6.81□□□□□ -1.32
CHD3-213ENST00000571249 ARID1AO14497 2285 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 NKX2-6A6NCS4 301 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 BECN2A8MW95 431 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 GOLGA6L6A8MZA4 724 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 GOLGA6L19H0YKK7 550 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 PDPK1O15530 556 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 ZNHIT1O43257 154 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 KIF1CO43896 1103 aaKnown RBP6.8□□□□□ -1.32
CHD3-213ENST00000571249 SLC19A2O60779 497 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 PAGE1O75459 146 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 RASSF9O75901 435 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 RECQL5O94762 991 aaPredicted RBP6.8□□□□□ -1.32
CHD3-213ENST00000571249 SMC2O95347 1197 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 GSRP00390 522 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 C9P02748 559 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 MYCLP1P12525 358 aaPredicted RBP6.8□□□□□ -1.32
CHD3-213ENST00000571249 POLD2P49005 469 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 SUOXP51687 545 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 PPP3CAQ08209 521 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms