RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 FAR2Q96K12 515 aa17.19■□□□□ 0.34
RPAIN-208ENST00000571043 TTC1Q99614 292 aa17.19■□□□□ 0.34
RPAIN-208ENST00000571043 C8orf33Q9H7E9 229 aaPredicted RBP17.19■□□□□ 0.34
RPAIN-208ENST00000571043 HEBP1Q9NRV9 189 aa17.19■□□□□ 0.34
RPAIN-208ENST00000571043 ZDHHC2Q9UIJ5 367 aa17.19■□□□□ 0.34
RPAIN-208ENST00000571043 PCDHB1Q9Y5F3 818 aa17.19■□□□□ 0.34
RPAIN-208ENST00000571043 GOLGA8CPA6NN73 597 aa17.18■□□□□ 0.34
RPAIN-208ENST00000571043 WASH3PC4AMC7 463 aa17.18■□□□□ 0.34
RPAIN-208ENST00000571043 GRID2O43424 1007 aa17.18■□□□□ 0.34
RPAIN-208ENST00000571043 HNRNPH1P31943 449 aaKnown RBP17.18■□□□□ 0.34
RPAIN-208ENST00000571043 CCR10P46092 362 aa17.18■□□□□ 0.34
RPAIN-208ENST00000571043 SOX9P48436 509 aa17.18■□□□□ 0.34
RPAIN-208ENST00000571043 VASPP50552 380 aaPredicted RBP17.18■□□□□ 0.34
RPAIN-208ENST00000571043 MESP2Q0VG99 397 aa17.18■□□□□ 0.34
RPAIN-208ENST00000571043 GEN1Q17RS7 908 aa17.18■□□□□ 0.34
RPAIN-208ENST00000571043 PREPLQ4J6C6 727 aaPredicted RBP17.18■□□□□ 0.34
RPAIN-208ENST00000571043 VWA5B1Q5TIE3 1220 aa17.18■□□□□ 0.34
RPAIN-208ENST00000571043 TMEM215Q68D42 235 aa17.18■□□□□ 0.34
RPAIN-208ENST00000571043 GRAMD4Q6IC98 578 aa17.18■□□□□ 0.34
RPAIN-208ENST00000571043 UGT3A1Q6NUS8 523 aa17.18■□□□□ 0.34
RPAIN-208ENST00000571043 PAQR3Q6TCH7 311 aa17.18■□□□□ 0.34
RPAIN-208ENST00000571043 TAS2R42Q7RTR8 314 aa17.18■□□□□ 0.34
RPAIN-208ENST00000571043 SNX20Q7Z614 316 aa17.18■□□□□ 0.34
RPAIN-208ENST00000571043 KDM1BQ8NB78 822 aa17.18■□□□□ 0.34
RPAIN-208ENST00000571043 MOCOSQ96EN8 888 aa17.18■□□□□ 0.34
RPAIN-208ENST00000571043 SCRN2Q96FV2 425 aa17.18■□□□□ 0.34
RPAIN-208ENST00000571043 CCDC28BQ9BUN5 200 aa17.18■□□□□ 0.34
RPAIN-208ENST00000571043 P2RY12Q9H244 342 aa17.18■□□□□ 0.34
RPAIN-208ENST00000571043 A0A0C4DFX4 3053 aa17.18■□□□□ 0.34
RPAIN-208ENST00000571043 PRR5-ARHGAP8B1AHC4 643 aa17.17■□□□□ 0.34
RPAIN-208ENST00000571043 SPECC1L-ADORA2AF8WAN1 911 aa17.17■□□□□ 0.34
RPAIN-208ENST00000571043 ITGALP20701 1170 aa17.17■□□□□ 0.34
RPAIN-208ENST00000571043 RPS3P23396 243 aaKnown RBP eCLIP17.17■□□□□ 0.34
RPAIN-208ENST00000571043 CTHP32929 405 aa17.17■□□□□ 0.34
RPAIN-208ENST00000571043 KCNC1P48547 511 aa17.17■□□□□ 0.34
RPAIN-208ENST00000571043 GALK1P51570 392 aa17.17■□□□□ 0.34
RPAIN-208ENST00000571043 CCNHP51946 323 aaPredicted RBP17.17■□□□□ 0.34
RPAIN-208ENST00000571043 ARHGAP8P85298 464 aa17.17■□□□□ 0.34
RPAIN-208ENST00000571043 ACCSLQ4AC99 568 aa17.17■□□□□ 0.34
RPAIN-208ENST00000571043 SLC9B1Q4ZJI4 515 aa17.17■□□□□ 0.34
RPAIN-208ENST00000571043 SLC44A4Q53GD3 710 aa17.17■□□□□ 0.34
RPAIN-208ENST00000571043 CTSL3PQ5NE16 218 aa17.17■□□□□ 0.34
RPAIN-208ENST00000571043 NAIF1Q69YI7 327 aaPredicted RBP17.17■□□□□ 0.34
RPAIN-208ENST00000571043 TPRG1Q6ZUI0 275 aa17.17■□□□□ 0.34
RPAIN-208ENST00000571043 FRMD7Q6ZUT3 714 aa17.17■□□□□ 0.34
RPAIN-208ENST00000571043 USP45Q70EL2 814 aa17.17■□□□□ 0.34
RPAIN-208ENST00000571043 LONP2Q86WA8 852 aa17.17■□□□□ 0.34
RPAIN-208ENST00000571043 ZSWIM9Q86XI8 627 aa17.17■□□□□ 0.34
RPAIN-208ENST00000571043 AFAP1L2Q8N4X5 818 aa17.17■□□□□ 0.34
RPAIN-208ENST00000571043 STAG3L4Q8TBR4 150 aa17.17■□□□□ 0.34
RPAIN-208ENST00000571043 MAPK15Q8TD08 544 aa17.17■□□□□ 0.34
RPAIN-208ENST00000571043 WFIKKN2Q8TEU8 576 aa17.17■□□□□ 0.34
RPAIN-208ENST00000571043 MCCC1Q96RQ3 725 aaPredicted RBP17.17■□□□□ 0.34
RPAIN-208ENST00000571043 ATOH8Q96SQ7 321 aa17.17■□□□□ 0.34
RPAIN-208ENST00000571043 GPR21Q99679 349 aa17.17■□□□□ 0.34
RPAIN-208ENST00000571043 FBRSL1Q9HCM7 1045 aaKnown RBP17.17■□□□□ 0.34
RPAIN-208ENST00000571043 CYP4F12Q9HCS2 524 aa17.17■□□□□ 0.34
RPAIN-208ENST00000571043 TRMT6Q9UJA5 497 aaKnown RBP17.17■□□□□ 0.34
RPAIN-208ENST00000571043 STK38LQ9Y2H1 464 aa17.17■□□□□ 0.34
RPAIN-208ENST00000571043 MTF2Q9Y483 593 aaPredicted RBP17.17■□□□□ 0.34
RPAIN-208ENST00000571043 PIAS3Q9Y6X2 628 aa17.17■□□□□ 0.34
RPAIN-208ENST00000571043 TRBV5-4A0A0C4DH59 114 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 A0A0U1RQS6 177 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 H3BMM5 538 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 GAPDHSO14556 408 aaPredicted RBP17.16■□□□□ 0.34
RPAIN-208ENST00000571043 PRMT5O14744 637 aaPredicted RBP17.16■□□□□ 0.34
RPAIN-208ENST00000571043 GYG2O15488 501 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 OR1I1O60431 355 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 KERAO60938 352 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 CLDN7O95471 211 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 ENO1P06733 434 aaKnown RBP17.16■□□□□ 0.34
RPAIN-208ENST00000571043 ZNF7P17097 686 aaPredicted RBP17.16■□□□□ 0.34
RPAIN-208ENST00000571043 POLR2EP19388 210 aaKnown RBP17.16■□□□□ 0.34
RPAIN-208ENST00000571043 UBAP2LQ14157 1087 aaKnown RBP17.16■□□□□ 0.34
RPAIN-208ENST00000571043 GPR33Q49SQ1 333 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 ZNF678Q5SXM1 525 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 IER5LQ5T953 404 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 TXNDC11Q6PKC3 985 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 DPY19L3Q6ZPD9 716 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 ACAD11Q709F0 780 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 RAB44Q7Z6P3 723 aaPredicted RBP17.16■□□□□ 0.34
RPAIN-208ENST00000571043 SPNS2Q8IVW8 549 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 SUGP1Q8IWZ8 645 aaKnown RBP17.16■□□□□ 0.34
RPAIN-208ENST00000571043 GJD3Q8N144 294 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 TERB1Q8NA31 727 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 PHF21BQ96EK2 531 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 MSANTD3Q96H12 275 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 MIPEPQ99797 713 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 P2RY13Q9BPV8 354 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 IL26Q9NPH9 171 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 TCF7L2Q9NQB0 619 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 ACSS2Q9NR19 701 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.16■□□□□ 0.34
RPAIN-208ENST00000571043 SLCO3A1Q9UIG8 710 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 ERVW-1Q9UQF0 538 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 SHISA7A6NL88 538 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 TRPC5OSA6NMA1 111 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 PRRT4C9JH25 899 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 KAT7O95251 611 aa17.16■□□□□ 0.34
RPAIN-208ENST00000571043 PRAMEF1O95521 474 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms