RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 CAAP1Q9H8G2 361 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 ZFYVE1Q9HBF4 777 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 MAGEE1Q9HCI5 957 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 PCDHGA7Q9Y5G6 932 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 POM121BA6NF01 834 aa13.22□□□□□ -0.29
CCDC40-205ENST00000571028 TTI1O43156 1089 aa13.22□□□□□ -0.29
CCDC40-205ENST00000571028 JMJD7P0C870 316 aa13.22□□□□□ -0.29
CCDC40-205ENST00000571028 JUNDP17535 347 aa13.22□□□□□ -0.29
CCDC40-205ENST00000571028 GM2AP17900 193 aa13.22□□□□□ -0.29
CCDC40-205ENST00000571028 ITGB6P18564 788 aa13.22□□□□□ -0.29
CCDC40-205ENST00000571028 IGFALSP35858 605 aa13.22□□□□□ -0.29
CCDC40-205ENST00000571028 GRIA1P42261 906 aa13.22□□□□□ -0.29
CCDC40-205ENST00000571028 PTGIRP43119 386 aa13.22□□□□□ -0.29
CCDC40-205ENST00000571028 RABIFP47224 123 aa13.22□□□□□ -0.29
CCDC40-205ENST00000571028 MTM1Q13496 603 aa13.22□□□□□ -0.29
CCDC40-205ENST00000571028 SEMA5AQ13591 1074 aa13.22□□□□□ -0.29
CCDC40-205ENST00000571028 PTPRCAPQ14761 206 aa13.22□□□□□ -0.29
CCDC40-205ENST00000571028 KCTD11Q693B1 232 aa13.22□□□□□ -0.29
CCDC40-205ENST00000571028 KYAT3Q6YP21 454 aaKnown RBP13.22□□□□□ -0.29
CCDC40-205ENST00000571028 GLT6D1Q7Z4J2 308 aa13.22□□□□□ -0.29
CCDC40-205ENST00000571028 TP53I13Q8NBR0 393 aaPredicted RBP13.22□□□□□ -0.29
CCDC40-205ENST00000571028 PLA2G15Q8NCC3 412 aa13.22□□□□□ -0.29
CCDC40-205ENST00000571028 SPOCK2Q92563 424 aa13.22□□□□□ -0.29
CCDC40-205ENST00000571028 LIN37Q96GY3 246 aaPredicted RBP13.22□□□□□ -0.29
CCDC40-205ENST00000571028 COQ10AQ96MF6 247 aa13.22□□□□□ -0.29
CCDC40-205ENST00000571028 KLF6Q99612 283 aaPredicted RBP13.22□□□□□ -0.29
CCDC40-205ENST00000571028 CCDC3Q9BQI4 270 aa13.22□□□□□ -0.29
CCDC40-205ENST00000571028 SLC25A18Q9H1K4 315 aa13.22□□□□□ -0.29
CCDC40-205ENST00000571028 KCTD3Q9Y597 815 aa13.22□□□□□ -0.29
CCDC40-205ENST00000571028 PCDHB11Q9Y5F2 797 aa13.22□□□□□ -0.29
CCDC40-205ENST00000571028 ARID1BQ8NFD5 2236 aaPredicted RBP13.21□□□□□ -0.29
CCDC40-205ENST00000571028 TCRBV7S3A2A0A539 114 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 TMX2-CTNND1H3BSU7 103 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 GOLGA8MH3BSY2 632 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 TPP1O14773 563 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 LIPCP11150 499 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 ZNF30P17039 623 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 STC1P52823 247 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 SESN2P58004 480 aaPredicted RBP13.21□□□□□ -0.29
CCDC40-205ENST00000571028 TMPRSS15P98073 1019 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 FZD2Q14332 565 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 INPP5AQ14642 412 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 POU6F1Q14863 301 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 TGIF1Q15583 401 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 C4orf17Q53FE4 359 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 PERM1Q5SV97 790 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 RAET1GQ6H3X3 334 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 DENND5AQ6IQ26 1287 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 ESRP1Q6NXG1 681 aaKnown RBP13.21□□□□□ -0.29
CCDC40-205ENST00000571028 RAB11FIP2Q7L804 512 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 LINC00523Q86TU6 105 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 PELI3Q8N2H9 469 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 BTN2A2Q8WVV5 523 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 SCAMP4Q969E2 229 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 CENPTQ96BT3 561 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 EID2BQ96D98 161 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 BMFQ96LC9 184 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 RUNDC3BQ96NL0 473 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 LYSMD1Q96S90 227 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 RIOK2Q9BVS4 552 aaKnown RBP13.21□□□□□ -0.29
CCDC40-205ENST00000571028 ABCG8Q9H221 673 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 PKD2L2Q9NZM6 624 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 SPASTQ9UBP0 616 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 PCYOX1Q9UHG3 505 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 OR1A2Q9Y585 309 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 HS3ST3A1Q9Y663 406 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 ARL5AQ9Y689 179 aa13.21□□□□□ -0.29
CCDC40-205ENST00000571028 SPTY2D1-AS1A0A0U1RR47 76 aa13.2□□□□□ -0.3
CCDC40-205ENST00000571028 ERI2A8K979 691 aaKnown RBP13.2□□□□□ -0.3
CCDC40-205ENST00000571028 PSMD11O00231 422 aa13.2□□□□□ -0.3
CCDC40-205ENST00000571028 ANXA6P08133 673 aa13.2□□□□□ -0.3
CCDC40-205ENST00000571028 UGT1A5P35504 534 aa13.2□□□□□ -0.3
CCDC40-205ENST00000571028 SPINT3P49223 89 aa13.2□□□□□ -0.3
CCDC40-205ENST00000571028 CDH17Q12864 832 aa13.2□□□□□ -0.3
CCDC40-205ENST00000571028 PTK6Q13882 451 aa13.2□□□□□ -0.3
CCDC40-205ENST00000571028 PDE1CQ14123 709 aaPredicted RBP13.2□□□□□ -0.3
CCDC40-205ENST00000571028 TBR1Q16650 682 aa13.2□□□□□ -0.3
CCDC40-205ENST00000571028 WHAMMP3Q1A5X7 153 aa13.2□□□□□ -0.3
CCDC40-205ENST00000571028 CCDC38Q502W7 563 aa13.2□□□□□ -0.3
CCDC40-205ENST00000571028 CERCAMQ5T4B2 595 aa13.2□□□□□ -0.3
CCDC40-205ENST00000571028 ANKRD22Q5VYY1 191 aa13.2□□□□□ -0.3
CCDC40-205ENST00000571028 IZUMO3Q5VZ72 239 aa13.2□□□□□ -0.3
CCDC40-205ENST00000571028 TMC3Q7Z5M5 1100 aa13.2□□□□□ -0.3
CCDC40-205ENST00000571028 TECPR1Q7Z6L1 1165 aa13.2□□□□□ -0.3
CCDC40-205ENST00000571028 TTC30BQ8N4P2 665 aa13.2□□□□□ -0.3
CCDC40-205ENST00000571028 ASB12Q8WXK4 309 aa13.2□□□□□ -0.3
CCDC40-205ENST00000571028 AP2M1Q96CW1 435 aa13.2□□□□□ -0.3
CCDC40-205ENST00000571028 DTD2Q96FN9 168 aa13.2□□□□□ -0.3
CCDC40-205ENST00000571028 LENG8Q96PV6 779 aaPredicted RBP13.2□□□□□ -0.3
CCDC40-205ENST00000571028 SRPK1Q96SB4 655 aaKnown RBP13.2□□□□□ -0.3
CCDC40-205ENST00000571028 SPATA16Q9BXB7 569 aa13.2□□□□□ -0.3
CCDC40-205ENST00000571028 FAM83DQ9H4H8 585 aa13.2□□□□□ -0.3
CCDC40-205ENST00000571028 SUDS3Q9H7L9 328 aaPredicted RBP13.2□□□□□ -0.3
CCDC40-205ENST00000571028 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.2□□□□□ -0.3
CCDC40-205ENST00000571028 HACD3Q9P035 362 aa13.2□□□□□ -0.3
CCDC40-205ENST00000571028 PISDQ9UG56 409 aa13.2□□□□□ -0.3
CCDC40-205ENST00000571028 APOBEC3BQ9UH17 382 aaKnown RBP13.2□□□□□ -0.3
CCDC40-205ENST00000571028 NEU2Q9Y3R4 380 aa13.2□□□□□ -0.3
CCDC40-205ENST00000571028 PCDHGA4Q9Y5G9 962 aa13.2□□□□□ -0.3
CCDC40-205ENST00000571028 MRFAP1Q9Y605 127 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms