RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 NAPAP54920 295 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 EVCP57679 992 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 HNF4GQ14541 408 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 SHBQ15464 509 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 DUSP28Q4G0W2 176 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 TDRD12Q587J7 1177 aaKnown RBP4.18□□□□□ -1.74
NUP88-202ENST00000570937 NAPEPLDQ6IQ20 393 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 FAM83HQ6ZRV2 1179 aaPredicted RBP4.18□□□□□ -1.74
NUP88-202ENST00000570937 SEPT14Q6ZU15 432 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 PATL1Q86TB9 770 aaKnown RBP4.18□□□□□ -1.74
NUP88-202ENST00000570937 RBM23Q86U06 439 aaKnown RBP4.18□□□□□ -1.74
NUP88-202ENST00000570937 TLK2Q86UE8 772 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 SRBD1Q8N5C6 995 aaKnown RBP4.18□□□□□ -1.74
NUP88-202ENST00000570937 MORC4Q8TE76 937 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 TMEM18Q96B42 140 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 ZNF274Q96GC6 653 aaPredicted RBP4.18□□□□□ -1.74
NUP88-202ENST00000570937 CDHR1Q96JP9 859 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 LBHD1Q9BQE6 289 aaPredicted RBP4.18□□□□□ -1.74
NUP88-202ENST00000570937 AGXT2Q9BYV1 514 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 ALDH8A1Q9H2A2 487 aaPredicted RBP4.18□□□□□ -1.74
NUP88-202ENST00000570937 TTC12Q9H892 705 aaPredicted RBP4.18□□□□□ -1.74
NUP88-202ENST00000570937 C6orf50Q9HD87 102 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 PXMP2Q9NR77 195 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 PCDHGB3Q9Y5G1 929 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 MORC2Q9Y6X9 1032 aaPredicted RBP4.18□□□□□ -1.74
NUP88-202ENST00000570937 ZSWIM8A7E2V4 1837 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 BRCA2P51587 3418 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 ELP1O95163 1332 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 SYNRGQ9UMZ2 1314 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 RBBP6Q7Z6E9 1792 aaKnown RBP4.17□□□□□ -1.74
NUP88-202ENST00000570937 PLXNB2O15031 1838 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 COL11A1P12107 1806 aaPredicted RBP4.17□□□□□ -1.74
NUP88-202ENST00000570937 EME2A4GXA9 379 aaPredicted RBP4.17□□□□□ -1.74
NUP88-202ENST00000570937 VWA3AA6NCI4 1184 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 SMCO2A6NFE2 343 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 ASAP2O43150 1006 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 PLEKHA8P1O95397 391 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 ADAP00813 363 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 GH1P01241 217 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 IL1AP01583 271 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 ASGR1P07306 291 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 ACAA1P09110 424 aaPredicted RBP4.17□□□□□ -1.74
NUP88-202ENST00000570937 SCG2P13521 617 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 THPOP40225 353 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 HALP42357 657 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 AMTP48728 403 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 CENPAP49450 140 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 PCYT1AP49585 367 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 NUDT6P53370 316 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 TRAF2Q12933 501 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 NEDD9Q14511 834 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 SLC18A3Q16572 532 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 ZNF585BQ52M93 769 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 ZNF324BQ6AW86 544 aaPredicted RBP4.17□□□□□ -1.74
NUP88-202ENST00000570937 GALNT17Q6IS24 598 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 MON1BQ7L1V2 547 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 FBXO16Q8IX29 292 aaPredicted RBP4.17□□□□□ -1.74
NUP88-202ENST00000570937 MCPH1Q8NEM0 835 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 KLHDC9Q8NEP7 349 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 CCDC148Q8NFR7 591 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 OR6J1Q8NGC5 347 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 ADAMTS14Q8WXS8 1223 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 WASF1Q92558 559 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 TCEANC2Q96MN5 208 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 TAAR1Q96RJ0 339 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 GFM1Q96RP9 751 aaKnown RBP4.17□□□□□ -1.74
NUP88-202ENST00000570937 TWNKQ96RR1 684 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 PYM1Q9BRP8 204 aaKnown RBP4.17□□□□□ -1.74
NUP88-202ENST00000570937 UPF3BQ9BZI7 483 aaKnown RBP4.17□□□□□ -1.74
NUP88-202ENST00000570937 UPF3AQ9H1J1 476 aaKnown RBP4.17□□□□□ -1.74
NUP88-202ENST00000570937 RIC8AQ9NPQ8 531 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 SH3GLB2Q9NR46 395 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 BARHL2Q9NY43 387 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 WWOXQ9NZC7 414 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 SUFUQ9UMX1 484 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 DNAH12Q6ZR08 3092 aa4.17□□□□□ -1.74
NUP88-202ENST00000570937 TNRC18O15417 2968 aaPredicted RBP4.17□□□□□ -1.74
NUP88-202ENST00000570937 PARP14Q460N5 1801 aa4.16□□□□□ -1.74
NUP88-202ENST00000570937 DOCK3Q8IZD9 2030 aa4.16□□□□□ -1.74
NUP88-202ENST00000570937 A0A0U1RQG5 324 aaPredicted RBP4.16□□□□□ -1.74
NUP88-202ENST00000570937 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.16□□□□□ -1.74
NUP88-202ENST00000570937 FAM90A7PA6NKC0 464 aa4.16□□□□□ -1.74
NUP88-202ENST00000570937 FAM90A22PA8MWA6 464 aa4.16□□□□□ -1.74
NUP88-202ENST00000570937 FAM90A12PA8MX19 464 aa4.16□□□□□ -1.74
NUP88-202ENST00000570937 FAM90A23PA8MXZ1 464 aa4.16□□□□□ -1.74
NUP88-202ENST00000570937 MEIS2O14770 477 aa4.16□□□□□ -1.74
NUP88-202ENST00000570937 FIBPO43427 364 aa4.16□□□□□ -1.74
NUP88-202ENST00000570937 PIP5K1CO60331 668 aa4.16□□□□□ -1.74
NUP88-202ENST00000570937 DEXIO95424 95 aa4.16□□□□□ -1.74
NUP88-202ENST00000570937 CHRM4P08173 479 aa4.16□□□□□ -1.74
NUP88-202ENST00000570937 SUPT20HL2P0C7V6 817 aa4.16□□□□□ -1.74
NUP88-202ENST00000570937 NAGAP17050 411 aa4.16□□□□□ -1.74
NUP88-202ENST00000570937 IFNAR1P17181 557 aa4.16□□□□□ -1.74
NUP88-202ENST00000570937 DCTDP32321 178 aa4.16□□□□□ -1.74
NUP88-202ENST00000570937 DSCR9P59020 149 aa4.16□□□□□ -1.74
NUP88-202ENST00000570937 NLRP5P59047 1200 aa4.16□□□□□ -1.74
NUP88-202ENST00000570937 ADORA2A-AS1P86434 159 aa4.16□□□□□ -1.74
NUP88-202ENST00000570937 SLC18A2Q05940 514 aa4.16□□□□□ -1.74
NUP88-202ENST00000570937 TBL3Q12788 808 aaKnown RBP4.16□□□□□ -1.74
NUP88-202ENST00000570937 PPFIA1Q13136 1202 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms