RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 CLEC17AQ6ZS10 378 aa15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 BPHLQ86WA6 291 aaPredicted RBP15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 PPP1R3BQ86XI6 285 aa15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 EFCAB3Q8N7B9 438 aa15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 GALNT6Q8NCL4 622 aa15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 GALNT11Q8NCW6 608 aa15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 LPCAT1Q8NF37 534 aa15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 ARRDC2Q8TBH0 407 aa15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 ZDHHC12Q96GR4 267 aa15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 SMIM14Q96QK8 99 aa15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 OR6C1Q96RD1 312 aa15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 RAB33BQ9H082 229 aa15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 KLC4Q9NSK0 619 aa15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 OGFRQ9NZT2 677 aa15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 ATXN10Q9UBB4 475 aa15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 NFKBIL1Q9UBC1 381 aaPredicted RBP15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 EPHA6Q9UF33 1036 aa15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 TTLL3Q9Y4R7 772 aa15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 ADGRG1Q9Y653 693 aa15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 MRPS18BQ9Y676 258 aaKnown RBP15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 USP9YO00507 2555 aaPredicted RBP15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 NBASA2RRP1 2371 aa15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 CHUKO15111 745 aa15.52■□□□□ 0.08
HERPUD1-215ENST00000568676 KMOO15229 486 aa15.52■□□□□ 0.08
HERPUD1-215ENST00000568676 MFSD11O43934 449 aa15.52■□□□□ 0.08
HERPUD1-215ENST00000568676 RASSF9O75901 435 aa15.52■□□□□ 0.08
HERPUD1-215ENST00000568676 KIAA0754O94854 1291 aa15.52■□□□□ 0.08
HERPUD1-215ENST00000568676 SLC25A14O95258 325 aaPredicted RBP15.52■□□□□ 0.08
HERPUD1-215ENST00000568676 TCF4P15884 667 aa15.52■□□□□ 0.08
HERPUD1-215ENST00000568676 ZNF8P17098 575 aaPredicted RBP15.52■□□□□ 0.08
HERPUD1-215ENST00000568676 MX2P20592 715 aa15.52■□□□□ 0.08
HERPUD1-215ENST00000568676 IL4RP24394 825 aa15.52■□□□□ 0.08
HERPUD1-215ENST00000568676 CAPZBP47756 277 aa15.52■□□□□ 0.08
HERPUD1-215ENST00000568676 GFERP55789 205 aa15.52■□□□□ 0.08
HERPUD1-215ENST00000568676 ZNF569Q5MCW4 686 aa15.52■□□□□ 0.08
HERPUD1-215ENST00000568676 CCDC183Q5T5S1 534 aa15.52■□□□□ 0.08
HERPUD1-215ENST00000568676 WASH2PQ6VEQ5 465 aa15.52■□□□□ 0.08
HERPUD1-215ENST00000568676 THAP4Q8WY91 577 aa15.52■□□□□ 0.08
HERPUD1-215ENST00000568676 KLHL6Q8WZ60 621 aa15.52■□□□□ 0.08
HERPUD1-215ENST00000568676 TGM7Q96PF1 710 aa15.52■□□□□ 0.08
HERPUD1-215ENST00000568676 TIMM29Q9BSF4 260 aa15.52■□□□□ 0.08
HERPUD1-215ENST00000568676 XPO4Q9C0E2 1151 aaKnown RBP15.52■□□□□ 0.08
HERPUD1-215ENST00000568676 TWSG1Q9GZX9 223 aa15.52■□□□□ 0.08
HERPUD1-215ENST00000568676 HSD3B7Q9H2F3 369 aa15.52■□□□□ 0.08
HERPUD1-215ENST00000568676 OSGEPL1Q9H4B0 414 aa15.52■□□□□ 0.08
HERPUD1-215ENST00000568676 PDE7BQ9NP56 450 aa15.52■□□□□ 0.08
HERPUD1-215ENST00000568676 WASH6PQ9NQA3 447 aa15.52■□□□□ 0.08
HERPUD1-215ENST00000568676 RTN4Q9NQC3 1192 aaKnown RBP15.52■□□□□ 0.08
HERPUD1-215ENST00000568676 VEGFDO43915 354 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 KATNA1O75449 491 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 SPAG6O75602 509 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 KRT7P08729 469 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 ZNF28P17035 718 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 CASP14P31944 242 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 MLLT10P55197 1068 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 SEMA5AQ13591 1074 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 DNASE1L3Q13609 305 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 QPCTQ16769 361 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 INSCQ1MX18 579 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 FILIP1LQ4L180 1135 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 FHL5Q5TD97 284 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 NCBP2-AS2Q69YL0 99 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 TXNRD3NBQ6F5E7 133 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 ABRAXAS1Q6UWZ7 409 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 LRRTM4Q86VH4 590 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 MAP7D3Q8IWC1 876 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 TRAM1L1Q8N609 369 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 SRPK1Q96SB4 655 aaKnown RBP15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 ZNF670Q9BS34 389 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 SPATA16Q9BXB7 569 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 GPR87Q9BY21 358 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 NAT10Q9H0A0 1025 aaKnown RBP15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 BRD8Q9H0E9 1235 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 OR2AG1Q9H205 316 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 ZFYVE1Q9HBF4 777 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 LHX9Q9NQ69 397 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 LMBRD1Q9NUN5 540 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 LNPEPQ9UIQ6 1025 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 TLK1Q9UKI8 766 aa15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 BZW2Q9Y6E2 419 aaKnown RBP15.51■□□□□ 0.07
HERPUD1-215ENST00000568676 PIPSLA2A3N6 862 aa15.5■□□□□ 0.07
HERPUD1-215ENST00000568676 CDC14CA4D256 554 aa15.5■□□□□ 0.07
HERPUD1-215ENST00000568676 PDZK1P1A8MUH7 402 aa15.5■□□□□ 0.07
HERPUD1-215ENST00000568676 MYO1FO00160 1098 aa15.5■□□□□ 0.07
HERPUD1-215ENST00000568676 KCNJ13O60928 360 aa15.5■□□□□ 0.07
HERPUD1-215ENST00000568676 AGFG2O95081 481 aa15.5■□□□□ 0.07
HERPUD1-215ENST00000568676 TYRP1P17643 537 aa15.5■□□□□ 0.07
HERPUD1-215ENST00000568676 VCLP18206 1134 aa15.5■□□□□ 0.07
HERPUD1-215ENST00000568676 NELFEP18615 380 aaKnown RBP15.5■□□□□ 0.07
HERPUD1-215ENST00000568676 SLC19A1P41440 591 aa15.5■□□□□ 0.07
HERPUD1-215ENST00000568676 SEPHS1P49903 392 aa15.5■□□□□ 0.07
HERPUD1-215ENST00000568676 IHHQ14623 411 aa15.5■□□□□ 0.07
HERPUD1-215ENST00000568676 PDK2Q15119 407 aa15.5■□□□□ 0.07
HERPUD1-215ENST00000568676 TDRD12Q587J7 1177 aaKnown RBP15.5■□□□□ 0.07
HERPUD1-215ENST00000568676 AGAP9Q5VTM2 703 aa15.5■□□□□ 0.07
HERPUD1-215ENST00000568676 CACHD1Q5VU97 1274 aa15.5■□□□□ 0.07
HERPUD1-215ENST00000568676 KLHL35Q6PF15 583 aa15.5■□□□□ 0.07
HERPUD1-215ENST00000568676 UBXN4Q92575 508 aa15.5■□□□□ 0.07
HERPUD1-215ENST00000568676 GLYATL1Q969I3 302 aa15.5■□□□□ 0.07
HERPUD1-215ENST00000568676 HDAC11Q96DB2 347 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms