RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 PCDH12Q9NPG4 1184 aa17■□□□□ 0.31
VAC14-210ENST00000568548 TBC1D23Q9NUY8 699 aa17■□□□□ 0.31
VAC14-210ENST00000568548 SPO11Q9Y5K1 396 aa17■□□□□ 0.31
VAC14-210ENST00000568548 CORINQ9Y5Q5 1042 aa17■□□□□ 0.31
VAC14-210ENST00000568548 OAS3Q9Y6K5 1087 aaKnown RBP17■□□□□ 0.31
VAC14-210ENST00000568548 PTGES3LE9PB15 166 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 CA12O43570 354 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 ATXN1LP0C7T5 689 aaKnown RBP16.99■□□□□ 0.31
VAC14-210ENST00000568548 RPS9P46781 194 aaKnown RBP16.99■□□□□ 0.31
VAC14-210ENST00000568548 IL1RL1Q01638 556 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 CREB5Q02930 508 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 SLC36A3Q495N2 470 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 MANEALQ5VSG8 457 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 UTS2BQ765I0 119 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 MILR1Q7Z6M3 343 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 TRPV3Q8NET8 790 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 PADI4Q9UM07 663 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 CCDC154A6NI56 674 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 NOL3O60936 208 aaKnown RBP16.99■□□□□ 0.31
VAC14-210ENST00000568548 OCM2P0CE71 109 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 OCMP0CE72 109 aaPredicted RBP16.99■□□□□ 0.31
VAC14-210ENST00000568548 SHMT2P34897 504 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 HTR6P50406 440 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 FCGRTP55899 365 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 TBX4P57082 545 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 PHEXP78562 749 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 PTPRNQ16849 979 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 GRAMD4Q6IC98 578 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 TIGD7Q6NT04 549 aaPredicted RBP16.99■□□□□ 0.31
VAC14-210ENST00000568548 GALNT18Q6P9A2 607 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 KIAA0408Q6ZU52 694 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 ZNF280BQ86YH2 543 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 BBS5Q8N3I7 341 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 OR7D4Q8NG98 312 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 ARRDC2Q8TBH0 407 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 MYRFLQ96LU7 910 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 HGH1Q9BTY7 390 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 ABCG8Q9H221 673 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 ARMC1Q9NVT9 282 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 PCDHGC4Q9Y5F7 938 aa16.99■□□□□ 0.31
VAC14-210ENST00000568548 SH3PXD2BA1X283 911 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 XYLBO75191 536 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 BMP10O95393 424 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 GUCA1CO95843 209 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 IGLV3-25P01717 112 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 CYBBP04839 570 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 CNPP09543 421 aaKnown RBP16.98■□□□□ 0.31
VAC14-210ENST00000568548 ALDH4A1P30038 563 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 RGRP47804 291 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 PERM1Q5SV97 790 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 FAM171BQ6P995 826 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 BLOC1S3Q6QNY0 202 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 LZTR1Q8N653 840 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 HM13Q8TCT9 377 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 FIG4Q92562 907 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 UHRF1Q96T88 793 aaPredicted RBP16.98■□□□□ 0.31
VAC14-210ENST00000568548 ADAM2Q99965 735 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 C9orf16Q9BUW7 83 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 IFT80Q9P2H3 777 aaPredicted RBP16.98■□□□□ 0.31
VAC14-210ENST00000568548 TRPV2Q9Y5S1 764 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 CDH23Q9H251 3354 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 K7EPI3 171 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 FGF10O15520 208 aaPredicted RBP16.98■□□□□ 0.31
VAC14-210ENST00000568548 SYNCRIPO60506 623 aaKnown RBP16.98■□□□□ 0.31
VAC14-210ENST00000568548 ATP6V0D1P61421 351 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 TSPY1Q01534 308 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 C10orf120Q5SQS8 335 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 ABRAXAS1Q6UWZ7 409 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 CD300LGQ6UXG3 332 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 PIWIL3Q7Z3Z3 882 aaKnown RBP16.98■□□□□ 0.31
VAC14-210ENST00000568548 BTLAQ7Z6A9 289 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 PIANPQ8IYJ0 282 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 OR4L1Q8NH43 312 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 CLHC1Q8NHS4 586 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 ACBD6Q9BR61 282 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 SPC25Q9HBM1 224 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 TRNAU1APQ9NX07 287 aaKnown RBP16.98■□□□□ 0.31
VAC14-210ENST00000568548 ACTR3BQ9P1U1 418 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 PADI3Q9ULW8 664 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 PCDHA9Q9Y5H5 950 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 SQORQ9Y6N5 450 aa16.98■□□□□ 0.31
VAC14-210ENST00000568548 ZBBXA8MT70 800 aa16.97■□□□□ 0.31
VAC14-210ENST00000568548 FFAR3O14843 346 aa16.97■□□□□ 0.31
VAC14-210ENST00000568548 GPR42O15529 346 aa16.97■□□□□ 0.31
VAC14-210ENST00000568548 HMOX2P30519 316 aa16.97■□□□□ 0.31
VAC14-210ENST00000568548 FOXD4Q12950 439 aaPredicted RBP16.97■□□□□ 0.31
VAC14-210ENST00000568548 ZNF235Q14590 738 aa16.97■□□□□ 0.31
VAC14-210ENST00000568548 EEF1AKMT1Q8WVE0 214 aa16.97■□□□□ 0.31
VAC14-210ENST00000568548 RSPH1Q8WYR4 309 aa16.97■□□□□ 0.31
VAC14-210ENST00000568548 TANKQ92844 425 aa16.97■□□□□ 0.31
VAC14-210ENST00000568548 ROPN1LQ96C74 230 aa16.97■□□□□ 0.31
VAC14-210ENST00000568548 TSPAN18Q96SJ8 248 aa16.97■□□□□ 0.31
VAC14-210ENST00000568548 ATOH8Q96SQ7 321 aa16.97■□□□□ 0.31
VAC14-210ENST00000568548 MFSD1Q9H3U5 465 aa16.97■□□□□ 0.31
VAC14-210ENST00000568548 HIPK3Q9H422 1215 aa16.97■□□□□ 0.31
VAC14-210ENST00000568548 SDR39U1Q9NRG7 319 aaPredicted RBP16.97■□□□□ 0.31
VAC14-210ENST00000568548 CATSPERZQ9NTU4 200 aa16.97■□□□□ 0.31
VAC14-210ENST00000568548 SMPD3Q9NY59 655 aaPredicted RBP16.97■□□□□ 0.31
VAC14-210ENST00000568548 CIDEBQ9UHD4 219 aa16.97■□□□□ 0.31
VAC14-210ENST00000568548 ANAPC2Q9UJX6 822 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms