RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 TMEM259Q4ZIN3 620 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 ATP6AP1LQ52LC2 224 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 XKR7Q5GH72 579 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 MTX3Q5HYI7 312 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 TMTC4Q5T4D3 741 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 TPGS2Q68CL5 300 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 RNF165Q6ZSG1 346 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 FRA10AC1Q70Z53 315 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 RPS27LQ71UM5 84 aaKnown RBP9.24□□□□□ -0.93
BBS4-210ENST00000566400 SATL1Q86VE3 508 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 SLC15A3Q8IY34 581 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 CFAP52Q8N1V2 620 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 LEMD2Q8NC56 503 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 FAM156AQ8NDB6 213 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 LPCAT1Q8NF37 534 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 MDGA1Q8NFP4 955 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 OR9I1Q8NGQ6 314 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 GIPC2Q8TF65 315 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 GFM2Q969S9 779 aaKnown RBP9.24□□□□□ -0.93
BBS4-210ENST00000566400 TRMT2BQ96GJ1 504 aaKnown RBP9.24□□□□□ -0.93
BBS4-210ENST00000566400 CAPNS2Q96L46 248 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 PRPF18Q99633 342 aaKnown RBP9.24□□□□□ -0.93
BBS4-210ENST00000566400 MUC3BQ9H195 1237 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 PIDD1Q9HB75 910 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 MAGEE1Q9HCI5 957 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 CD320Q9NPF0 282 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 SEMA4BQ9NPR2 832 aaPredicted RBP9.24□□□□□ -0.93
BBS4-210ENST00000566400 UBAP1Q9NZ09 502 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 CD274Q9NZQ7 290 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 MAP10Q9P2G4 905 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 MTRRQ9UBK8 725 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 SRRDQ9UH36 339 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 AFF4Q9UHB7 1163 aaKnown RBP9.24□□□□□ -0.93
BBS4-210ENST00000566400 STOML2Q9UJZ1 356 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 PCTPQ9UKL6 214 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 SLC8A2Q9UPR5 921 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 PHF24Q9UPV7 400 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 ZNF711Q9Y462 761 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 CXorf51AA0A1B0GTR3 108 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 A0A1W2PQ45 241 aaPredicted RBP9.24□□□□□ -0.93
BBS4-210ENST00000566400 A0A1W2PQY0 241 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 CBX4O00257 560 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 TFAP2AP05549 437 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 LINC00032P0C843 101 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 ZNF7P17097 686 aaPredicted RBP9.24□□□□□ -0.93
BBS4-210ENST00000566400 ATF6P18850 670 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 TSPAN8P19075 237 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 CHRM3P20309 590 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 RPS3P23396 243 aaKnown RBP eCLIP9.24□□□□□ -0.93
BBS4-210ENST00000566400 NME5P56597 212 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 MYBPC1Q00872 1141 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 PRKG2Q13237 762 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 PCBP2Q15366 365 aaKnown RBP eCLIP9.24□□□□□ -0.931e-6■■■■■ 45.7
BBS4-210ENST00000566400 CYTH1Q15438 398 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 TSNQ15631 228 aaKnown RBP9.24□□□□□ -0.93
BBS4-210ENST00000566400 VPS26BQ4G0F5 336 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 ZRANB3Q5FWF4 1079 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 RTP2Q5QGT7 225 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 C6orf52Q5T4I8 152 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 TTC23LQ6PF05 361 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 LAYNQ6UX15 382 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 CARM1Q86X55 608 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 DENND1CQ8IV53 801 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 TBC1D21Q8IYX1 336 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 TMEM199Q8N511 208 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 TRIML2Q8N7C3 387 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 CENPNQ96H22 339 aaPredicted RBP9.24□□□□□ -0.93
BBS4-210ENST00000566400 BIRC8Q96P09 236 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 TMEM79Q9BSE2 394 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 ALG2Q9H553 416 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 FBRSL1Q9HCM7 1045 aaKnown RBP9.24□□□□□ -0.93
BBS4-210ENST00000566400 MAFFQ9ULX9 164 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 SPO11Q9Y5K1 396 aa9.24□□□□□ -0.93
BBS4-210ENST00000566400 MRPL42Q9Y6G3 142 aaKnown RBP9.24□□□□□ -0.93
BBS4-210ENST00000566400 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.23□□□□□ -0.93
BBS4-210ENST00000566400 NME4O00746 187 aa9.23□□□□□ -0.93
BBS4-210ENST00000566400 PRMT5O14744 637 aaPredicted RBP9.23□□□□□ -0.93
BBS4-210ENST00000566400 RAD51BO15315 384 aa9.23□□□□□ -0.93
BBS4-210ENST00000566400 GMNNO75496 209 aa9.23□□□□□ -0.93
BBS4-210ENST00000566400 STC2O76061 302 aa9.23□□□□□ -0.93
BBS4-210ENST00000566400 PGM3O95394 542 aa9.23□□□□□ -0.93
BBS4-210ENST00000566400 VNN2O95498 520 aa9.23□□□□□ -0.93
BBS4-210ENST00000566400 OTCP00480 354 aa9.23□□□□□ -0.93
BBS4-210ENST00000566400 PRLP01236 227 aa9.23□□□□□ -0.93
BBS4-210ENST00000566400 ENO2P09104 434 aaPredicted RBP9.23□□□□□ -0.93
BBS4-210ENST00000566400 ELNP15502 786 aa9.23□□□□□ -0.93
BBS4-210ENST00000566400 ZNF23P17027 643 aa9.23□□□□□ -0.93
BBS4-210ENST00000566400 CAPN3P20807 821 aa9.23□□□□□ -0.93
BBS4-210ENST00000566400 SLC6A2P23975 617 aa9.23□□□□□ -0.93
BBS4-210ENST00000566400 HTR1EP28566 365 aa9.23□□□□□ -0.93
BBS4-210ENST00000566400 CORO1AP31146 461 aaKnown RBP9.23□□□□□ -0.93
BBS4-210ENST00000566400 HMGCLP35914 325 aa9.23□□□□□ -0.93
BBS4-210ENST00000566400 ALDH7A1P49419 539 aaKnown RBP9.23□□□□□ -0.93
BBS4-210ENST00000566400 POLR2JP52435 117 aaKnown RBP9.23□□□□□ -0.93
BBS4-210ENST00000566400 ATXN3P54252 364 aaPredicted RBP9.23□□□□□ -0.93
BBS4-210ENST00000566400 GRB7Q14451 532 aa9.23□□□□□ -0.93
BBS4-210ENST00000566400 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.23□□□□□ -0.93
BBS4-210ENST00000566400 KCTD21Q4G0X4 260 aa9.23□□□□□ -0.93
BBS4-210ENST00000566400 NCEH1Q6PIU2 408 aa9.23□□□□□ -0.93
BBS4-210ENST00000566400 CYP2R1Q6VVX0 501 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms