RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 CELA2BP08218 269 aaPredicted RBP8.08□□□□□ -1.12
CDH13-208ENST00000566333 F7P08709 466 aaPredicted RBP8.08□□□□□ -1.12
CDH13-208ENST00000566333 ACRV1P26436 265 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 TNFRSF8P28908 595 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 EPHA8P29322 1005 aaPredicted RBP8.08□□□□□ -1.12
CDH13-208ENST00000566333 POLD2P49005 469 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 CACNG1Q06432 222 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 PTK2BQ14289 1009 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 TYSND1Q2T9J0 566 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 HLA-BQ31612 363 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 GPR33Q49SQ1 333 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 ZRANB3Q5FWF4 1079 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 PRAMEF14Q5SWL7 426 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 TRMT10BQ6PF06 316 aaKnown RBP8.08□□□□□ -1.12
CDH13-208ENST00000566333 XKR5Q6UX68 686 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 PACS1Q6VY07 963 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 SERPINA9Q86WD7 417 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 DCP2Q8IU60 420 aaKnown RBP8.08□□□□□ -1.12
CDH13-208ENST00000566333 ANKMY2Q8IV38 441 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 ZNF547Q8IVP9 402 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 GSPT2Q8IYD1 628 aaKnown RBP8.08□□□□□ -1.12
CDH13-208ENST00000566333 ZBED8Q8IZ13 594 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 PHACTR4Q8IZ21 702 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 FBXO36Q8NEA4 188 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 OR56A4Q8NGH8 313 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 OR4L1Q8NH43 312 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 ZNF398Q8TD17 642 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 ELF4Q99607 663 aaPredicted RBP8.08□□□□□ -1.12
CDH13-208ENST00000566333 EDEM2Q9BV94 578 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 BOCQ9BWV1 1114 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 NUSAP1Q9BXS6 441 aaKnown RBP8.08□□□□□ -1.12
CDH13-208ENST00000566333 ZDHHC5Q9C0B5 715 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 OR2AG1Q9H205 316 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 FAM96AQ9H5X1 160 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 ASB8Q9H765 288 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 SAYSD1Q9NPB0 183 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 MRPL40Q9NQ50 206 aaKnown RBP8.08□□□□□ -1.12
CDH13-208ENST00000566333 SLC17A6Q9P2U8 582 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 ATXN10Q9UBB4 475 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 KLQ9UEF7 1012 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 ZC3H7BQ9UGR2 993 aaKnown RBP8.08□□□□□ -1.12
CDH13-208ENST00000566333 SUFUQ9UMX1 484 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 TMEM98Q9Y2Y6 226 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 ST14Q9Y5Y6 855 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.08□□□□□ -1.12
CDH13-208ENST00000566333 DGKBQ9Y6T7 804 aa8.08□□□□□ -1.12
CDH13-208ENST00000566333 PRR19A6NJB7 356 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 TNFRSF10CO14798 259 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 CHUKO15111 745 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 SCAMP1O15126 338 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 GDF9O60383 454 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 GFRA3O60609 400 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 MAGEC1O60732 1142 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 PIAS2O75928 621 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 SLC25A14O95258 325 aaPredicted RBP8.07□□□□□ -1.12
CDH13-208ENST00000566333 TTC4O95801 387 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 CER1O95813 267 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 POLBP06746 335 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 SYPP08247 313 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 GIMD1P0DJR0 217 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 ZNF8P17098 575 aaPredicted RBP8.07□□□□□ -1.12
CDH13-208ENST00000566333 PAMP19021 973 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 KELP23276 732 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 HTR1BP28222 390 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 PLA2G5P39877 138 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 RXRGP48443 463 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 CCT8P50990 548 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 HK3P52790 923 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 CTSCP53634 463 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 GPX6P59796 221 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 SRP54P61011 504 aaKnown RBP8.07□□□□□ -1.12
CDH13-208ENST00000566333 PRAMEP78395 509 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 IL9RQ01113 521 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 CUL1Q13616 776 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 FRG1Q14331 258 aaKnown RBP8.07□□□□□ -1.12
CDH13-208ENST00000566333 HLTFQ14527 1009 aaKnown RBP eCLIP8.07□□□□□ -1.12
CDH13-208ENST00000566333 LONRF1Q17RB8 773 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 ZNF658BQ4V348 819 aaPredicted RBP8.07□□□□□ -1.12
CDH13-208ENST00000566333 ZNF542PQ5EBM4 170 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 SPANXN3Q5MJ09 141 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 LDLRAP1Q5SW96 308 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 ZNF470Q6ECI4 717 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 IL27RAQ6UWB1 636 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 ENPP7Q6UWV6 458 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 CENPUQ71F23 418 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 C11orf96Q7Z7L8 435 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 LDB1Q86U70 411 aaPredicted RBP8.07□□□□□ -1.12
CDH13-208ENST00000566333 CCDC25Q86WR0 208 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 CILP2Q8IUL8 1156 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 RELL1Q8IUW5 271 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 CNTN4Q8IWV2 1026 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 OXR1Q8N573 874 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 RASGEF1AQ8N9B8 481 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.07□□□□□ -1.12
CDH13-208ENST00000566333 ZNF548Q8NEK5 533 aaPredicted RBP8.07□□□□□ -1.12
CDH13-208ENST00000566333 GPR150Q8NGU9 434 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 TSACCQ96A04 125 aaPredicted RBP8.07□□□□□ -1.12
CDH13-208ENST00000566333 ULK4Q96C45 1275 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 CERS2Q96G23 380 aa8.07□□□□□ -1.12
CDH13-208ENST00000566333 CFAP36Q96G28 342 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms