RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 APBB2Q92870 758 aa2.02□□□□□ -2.09
SMG1-212ENST00000566328 RHBDF1Q96CC6 855 aa2.02□□□□□ -2.09
SMG1-212ENST00000566328 GIMAP5Q96F15 307 aa2.02□□□□□ -2.09
SMG1-212ENST00000566328 PRMT6Q96LA8 375 aaPredicted RBP2.02□□□□□ -2.09
SMG1-212ENST00000566328 RHNO1Q9BSD3 238 aa2.02□□□□□ -2.09
SMG1-212ENST00000566328 SEBOXQ9HB31 216 aaPredicted RBP2.02□□□□□ -2.09
SMG1-212ENST00000566328 APOBEC3GQ9HC16 384 aaKnown RBP2.02□□□□□ -2.09
SMG1-212ENST00000566328 TRPC7Q9HCX4 862 aa2.02□□□□□ -2.09
SMG1-212ENST00000566328 C20orf141Q9NUB4 165 aa2.02□□□□□ -2.09
SMG1-212ENST00000566328 SLC38A7Q9NVC3 462 aa2.02□□□□□ -2.09
SMG1-212ENST00000566328 MAN1B1Q9UKM7 699 aa2.02□□□□□ -2.09
SMG1-212ENST00000566328 CEPT1Q9Y6K0 416 aa2.02□□□□□ -2.09
SMG1-212ENST00000566328 FLT1P17948 1338 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 IGLV3-10A0A075B6K4 115 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 C15orf62A8K5M9 175 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 KLLNB2CW77 178 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 PLOD2O00469 737 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 ANKRD28O15084 1053 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 TPOP07202 933 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 CEACAM8P31997 349 aaPredicted RBP2.01□□□□□ -2.09
SMG1-212ENST00000566328 WNT5AP41221 380 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 UBA7P41226 1012 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 PAPOLAP51003 745 aaKnown RBP2.01□□□□□ -2.09
SMG1-212ENST00000566328 CLDN20P56880 219 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 SNX16P57768 344 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 MS4A2Q01362 244 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 DUOXA1Q1HG43 343 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 USP41Q3LFD5 358 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 ZNF766Q5HY98 468 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 WDR45BQ5MNZ6 344 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 SLC25A30Q5SVS4 291 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 C6orf141Q5SZD1 244 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 ZNF343Q6P1L6 599 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 C1orf228Q6PIY5 440 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 PLXDC2Q6UX71 529 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 FTSJ3Q8IY81 847 aaKnown RBP2.01□□□□□ -2.09
SMG1-212ENST00000566328 PLD5Q8N7P1 536 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 RBM15BQ8NDT2 890 aaKnown RBP2.01□□□□□ -2.09
SMG1-212ENST00000566328 OXNAD1Q96HP4 312 aaPredicted RBP2.01□□□□□ -2.09
SMG1-212ENST00000566328 HARBI1Q96MB7 349 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 RTP3Q9BQQ7 232 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 GPATCH1Q9BRR8 931 aaKnown RBP2.01□□□□□ -2.09
SMG1-212ENST00000566328 HERPUD2Q9BSE4 406 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 USP44Q9H0E7 712 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 ZNF71Q9NQZ8 489 aaPredicted RBP2.01□□□□□ -2.09
SMG1-212ENST00000566328 HCN3Q9P1Z3 774 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 A4GNTQ9UNA3 340 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 PCNX3Q9H6A9 2034 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 ZNF318Q5VUA4 2279 aa2.01□□□□□ -2.09
SMG1-212ENST00000566328 C1orf226A1L170 272 aa2□□□□□ -2.09
SMG1-212ENST00000566328 FAM90A26D6RGX4 464 aa2□□□□□ -2.09
SMG1-212ENST00000566328 F5H423 210 aaPredicted RBP2□□□□□ -2.09
SMG1-212ENST00000566328 VCYO14598 125 aa2□□□□□ -2.09
SMG1-212ENST00000566328 SLC22A2O15244 555 aa2□□□□□ -2.09
SMG1-212ENST00000566328 PRC1O43663 620 aa2□□□□□ -2.09
SMG1-212ENST00000566328 PI15O43692 258 aa2□□□□□ -2.09
SMG1-212ENST00000566328 MOCS3O95396 460 aa2□□□□□ -2.09
SMG1-212ENST00000566328 NADKO95544 446 aaPredicted RBP2□□□□□ -2.09
SMG1-212ENST00000566328 KRTAP1-4P0C5Y4 121 aa2□□□□□ -2.09
SMG1-212ENST00000566328 VEGFAP15692 232 aaPredicted RBP2□□□□□ -2.09
SMG1-212ENST00000566328 ANXA7P20073 488 aaKnown RBP2□□□□□ -2.09
SMG1-212ENST00000566328 UGT1A1P22309 533 aa2□□□□□ -2.09
SMG1-212ENST00000566328 HOXC9P31274 260 aa2□□□□□ -2.09
SMG1-212ENST00000566328 APOBEC1P41238 236 aaKnown RBP2□□□□□ -2.09
SMG1-212ENST00000566328 HTR3AP46098 478 aa2□□□□□ -2.09
SMG1-212ENST00000566328 GLIPR1L2Q4G1C9 344 aa2□□□□□ -2.09
SMG1-212ENST00000566328 FASTKD1Q53R41 847 aaKnown RBP2□□□□□ -2.09
SMG1-212ENST00000566328 ARHGEF16Q5VV41 709 aa2□□□□□ -2.09
SMG1-212ENST00000566328 PAPD4Q6PIY7 484 aaKnown RBP2□□□□□ -2.09
SMG1-212ENST00000566328 PAQR6Q6TCH4 344 aa2□□□□□ -2.09
SMG1-212ENST00000566328 Q6ZR54 194 aa2□□□□□ -2.09
SMG1-212ENST00000566328 QSOX2Q6ZRP7 698 aa2□□□□□ -2.09
SMG1-212ENST00000566328 HAPLN4Q86UW8 402 aa2□□□□□ -2.09
SMG1-212ENST00000566328 C2CD5Q86YS7 1000 aa2□□□□□ -2.09
SMG1-212ENST00000566328 C11orf53Q8IXP5 236 aa2□□□□□ -2.09
SMG1-212ENST00000566328 SLC39A11Q8N1S5 342 aa2□□□□□ -2.09
SMG1-212ENST00000566328 PAF1Q8N7H5 531 aa2□□□□□ -2.09
SMG1-212ENST00000566328 SVIPQ8NHG7 77 aa2□□□□□ -2.09
SMG1-212ENST00000566328 PPP4R1Q8TF05 950 aa2□□□□□ -2.09
SMG1-212ENST00000566328 SLC44A1Q8WWI5 657 aa2□□□□□ -2.09
SMG1-212ENST00000566328 COG8Q96MW5 612 aa2□□□□□ -2.09
SMG1-212ENST00000566328 PCGF1Q9BSM1 259 aa2□□□□□ -2.09
SMG1-212ENST00000566328 FEM1BQ9UK73 627 aa2□□□□□ -2.09
SMG1-212ENST00000566328 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2□□□□□ -2.09
SMG1-212ENST00000566328 AAR2Q9Y312 384 aaKnown RBP2□□□□□ -2.09
SMG1-212ENST00000566328 CCDC180Q9P1Z9 1646 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 IGHV4-4A0A075B6R2 117 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 C5orf60A6NFR6 353 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 GAGE10A6NGK3 116 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 PALM2-AKAP2B1ALY0 433 aaPredicted RBP1.99□□□□□ -2.09
SMG1-212ENST00000566328 B9A039 149 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 PLIN1O60240 522 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 TRMUO75648 421 aaKnown RBP1.99□□□□□ -2.09
SMG1-212ENST00000566328 AP2A2O94973 939 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 IGKV3-15P01624 115 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 RAF1P04049 648 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 URODP06132 367 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 SERPINB3P29508 390 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 PGFP49763 221 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 GNAQP50148 359 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms