RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 CELF2-AS1Q8N7Q2 184 aa2.9□□□□□ -1.94
CHD9-218ENST00000566029 ZNF321PQ8N8H1 164 aa2.9□□□□□ -1.94
CHD9-218ENST00000566029 ADAM32Q8TC27 787 aa2.9□□□□□ -1.94
CHD9-218ENST00000566029 AGR3Q8TD06 166 aa2.9□□□□□ -1.94
CHD9-218ENST00000566029 ELOVL6Q9H5J4 265 aa2.9□□□□□ -1.94
CHD9-218ENST00000566029 CCM2LQ9NUG4 571 aaPredicted RBP2.9□□□□□ -1.94
CHD9-218ENST00000566029 LOC102724200A0A096LPH7 203 aaPredicted RBP2.9□□□□□ -1.95
CHD9-218ENST00000566029 GH2P01242 217 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 CYP3A4P08684 503 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 GNAO1P09471 354 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 DSG3P32926 999 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 UGT2B10P36537 528 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 MFAP3P55082 362 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 GCNT1Q02742 428 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 ZNF543Q08ER8 600 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 FRG1Q14331 258 aaKnown RBP2.9□□□□□ -1.95
CHD9-218ENST00000566029 NXNL2Q5VZ03 156 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 THAP5Q7Z6K1 395 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 TGIF2LXQ8IUE1 241 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 ZMIZ2Q8NF64 920 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 FEZF2Q8TBJ5 459 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 SGCDQ92629 289 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 ATG4CQ96DT6 458 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 TRAF4Q9BUZ4 470 aaPredicted RBP2.9□□□□□ -1.95
CHD9-218ENST00000566029 SLC25A23Q9BV35 468 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 SOX17Q9H6I2 414 aaPredicted RBP2.9□□□□□ -1.95
CHD9-218ENST00000566029 SARS2Q9NP81 518 aaKnown RBP2.9□□□□□ -1.95
CHD9-218ENST00000566029 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 IGKV6D-41A0A0C4DH26 115 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 H0YAE9 185 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 ARPC2O15144 300 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 TNFSF12O43508 249 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 SOAT2O75908 522 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 CDK14O94921 469 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 ATG7O95352 703 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 ZBTB7AO95365 584 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 HMGN1P05114 100 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 HSD17B7P56937 341 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 TAGLNQ01995 201 aaKnown RBP2.9□□□□□ -1.95
CHD9-218ENST00000566029 TOP3AQ13472 1001 aaPredicted RBP2.9□□□□□ -1.95
CHD9-218ENST00000566029 RIN1Q13671 783 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 NRF1Q16656 503 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 KLHL26Q53HC5 615 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 STEAP3Q658P3 488 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 DAW1Q8N136 415 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 TP53I13Q8NBR0 393 aaPredicted RBP2.9□□□□□ -1.95
CHD9-218ENST00000566029 BCL7CQ8WUZ0 217 aaPredicted RBP2.9□□□□□ -1.95
CHD9-218ENST00000566029 ELMO1Q92556 727 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 ZNF669Q96BR6 464 aaPredicted RBP2.9□□□□□ -1.95
CHD9-218ENST00000566029 NSUN4Q96CB9 384 aaKnown RBP2.9□□□□□ -1.95
CHD9-218ENST00000566029 MYRFLQ96LU7 910 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 MNTQ99583 582 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 CHID1Q9BWS9 393 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 CCDC59Q9P031 241 aaKnown RBP2.9□□□□□ -1.95
CHD9-218ENST00000566029 MLXQ9UH92 298 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 ZNF225Q9UK10 706 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 AURKCQ9UQB9 309 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 BCS1LQ9Y276 419 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 TCRBV5S2A0A599 114 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 LEUTXA8MZ59 168 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 PIK3R2O00459 728 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 AIM2O14862 343 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 SELENOFO60613 162 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 PGK1P00558 417 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 CFHP08603 1231 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 MPSTP25325 297 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 HLA-DMAP28067 261 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 MLLT1Q03111 559 aaPredicted RBP2.9□□□□□ -1.95
CHD9-218ENST00000566029 TBPL2Q6SJ96 375 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 USP50Q70EL3 339 aaPredicted RBP2.9□□□□□ -1.95
CHD9-218ENST00000566029 ZNF767PQ75MW2 155 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 MAP4K3Q8IVH8 894 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 PLPP6Q8IY26 295 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 RDH11Q8TC12 318 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 ACTL9Q8TC94 416 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 NXPE3Q969Y0 559 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 FBXO5Q9UKT4 447 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 MARF1Q9Y4F3 1742 aaKnown RBP2.9□□□□□ -1.95
CHD9-218ENST00000566029 TISP43B9A030 160 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 CHADO15335 359 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 ECDO95905 644 aaPredicted RBP2.9□□□□□ -1.95
CHD9-218ENST00000566029 RRM2P31350 389 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 CD68P34810 354 aaPredicted RBP2.9□□□□□ -1.95
CHD9-218ENST00000566029 MSX2P35548 267 aaPredicted RBP2.9□□□□□ -1.95
CHD9-218ENST00000566029 HADHAP40939 763 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 HTR3AP46098 478 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 GZMKP49863 264 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 CYP4F2P78329 520 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 GPLD1P80108 840 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 CYP4F3Q08477 520 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 ZNF252P-AS1Q0IIN9 211 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 TXNRD3NBQ6F5E7 133 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 CCBE1Q6UXH8 406 aaPredicted RBP2.9□□□□□ -1.95
CHD9-218ENST00000566029 MACC1Q6ZN28 852 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 CHMP1BQ7LBR1 199 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 ZNF720Q7Z2F6 126 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 SLC35F3Q8IY50 421 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 ZNF444Q8N0Y2 327 aaPredicted RBP2.9□□□□□ -1.95
CHD9-218ENST00000566029 BEST2Q8NFU1 509 aa2.9□□□□□ -1.95
CHD9-218ENST00000566029 KCNE4Q8WWG9 221 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms