RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 CTSL3PQ5NE16 218 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 LRRC8EQ6NSJ5 796 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 GDPD4Q6W3E5 623 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 TBC1D1Q86TI0 1168 aaPredicted RBP6.18□□□□□ -1.42
CHD9-217ENST00000565832 TTC7BQ86TV6 843 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 ISCA2Q86U28 154 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 ALYREFQ86V81 257 aaKnown RBP6.18□□□□□ -1.42
CHD9-217ENST00000565832 TDHQ8IZJ6 230 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 AHI1Q8N157 1196 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 SIDT2Q8NBJ9 832 aaKnown RBP6.18□□□□□ -1.42
CHD9-217ENST00000565832 TXNDC5Q8NBS9 432 aaKnown RBP6.18□□□□□ -1.42
CHD9-217ENST00000565832 OR6Y1Q8NGX8 325 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 EXT2Q93063 718 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 SCAMP4Q969E2 229 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 ISG20Q96AZ6 181 aaKnown RBP6.18□□□□□ -1.42
CHD9-217ENST00000565832 ECHDC3Q96DC8 303 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 OTUB2Q96DC9 234 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 GPR21Q99679 349 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 GATA5Q9BWX5 397 aaPredicted RBP6.18□□□□□ -1.42
CHD9-217ENST00000565832 ZCCHC2Q9C0B9 1178 aaKnown RBP6.18□□□□□ -1.42
CHD9-217ENST00000565832 MYLK2Q9H1R3 596 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 S1PR5Q9H228 398 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 ZNF576Q9H609 170 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 ASB8Q9H765 288 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 ZFP14Q9HCL3 533 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 SARS2Q9NP81 518 aaKnown RBP6.18□□□□□ -1.42
CHD9-217ENST00000565832 BRD7Q9NPI1 651 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 THAP1Q9NVV9 213 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 OXSMQ9NWU1 459 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 ELOVL2Q9NXB9 296 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 HEY2Q9UBP5 337 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 VTI1BQ9UEU0 232 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 PRDM4Q9UKN5 801 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 PLA2G4CQ9UP65 541 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 ITM2BQ9Y287 266 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 DNAJC16Q9Y2G8 782 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 PRSS21Q9Y6M0 314 aa6.18□□□□□ -1.42
CHD9-217ENST00000565832 NUP210Q8TEM1 1887 aaPredicted RBP6.17□□□□□ -1.42
CHD9-217ENST00000565832 TBC1D3BA6NDS4 549 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 LRRC14BA6NHZ5 514 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 PPP6CO00743 305 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 MTX2O75431 263 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 WISP3O95389 354 aaPredicted RBP6.17□□□□□ -1.42
CHD9-217ENST00000565832 GSTA1P08263 222 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 HNRNPLP14866 589 aaKnown RBP eCLIP6.17□□□□□ -1.428e-7■■■■□ 25.4
CHD9-217ENST00000565832 TFEBP19484 476 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 CHRM3P20309 590 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 FDXRP22570 491 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 SERPINB3P29508 390 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 WASP42768 502 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 LIG3P49916 1009 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 CLCN5P51795 746 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 AQP5P55064 265 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 ABCE1P61221 599 aaKnown RBP6.17□□□□□ -1.42
CHD9-217ENST00000565832 LAMB3Q13751 1172 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 OR4D1Q15615 310 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 TYSND1Q2T9J0 566 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 ATAT1Q5SQI0 421 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 ZNF648Q5T619 568 aaPredicted RBP6.17□□□□□ -1.42
CHD9-217ENST00000565832 ATG16L1Q676U5 607 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 AFTPHQ6ULP2 937 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 XKR5Q6UX68 686 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 CCDC121Q6ZUS5 278 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 MAVSQ7Z434 540 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 SERPINA9Q86WD7 417 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 CACUL1Q86Y37 369 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 MICALL1Q8N3F8 863 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 PCDH20Q8N6Y1 951 aaKnown RBP6.17□□□□□ -1.42
CHD9-217ENST00000565832 CCNYL1Q8N7R7 359 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 ZNF781Q8N8C0 355 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 GIMAP7Q8NHV1 300 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 EEF1AKMT1Q8WVE0 214 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 PEX13Q92968 403 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 GRAMD1AQ96CP6 724 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 AARSD1Q9BTE6 412 aaKnown RBP6.17□□□□□ -1.42
CHD9-217ENST00000565832 TMEM120AQ9BXJ8 343 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 TRIM55Q9BYV6 548 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 CPEB1Q9BZB8 566 aaKnown RBP6.17□□□□□ -1.42
CHD9-217ENST00000565832 POMKQ9H5K3 350 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 NSUN3Q9H649 340 aaKnown RBP6.17□□□□□ -1.42
CHD9-217ENST00000565832 TNFRSF12AQ9NP84 129 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 CLDND1Q9NY35 253 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 GDE1Q9NZC3 331 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 ARMCX1Q9P291 453 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 DEC1Q9P2X7 70 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 B4GALT6Q9UBX8 382 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 CDH7Q9ULB5 785 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 GOLGA4Q13439 2230 aaKnown RBP6.17□□□□□ -1.42
CHD9-217ENST00000565832 CAPN8A6NHC0 703 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 TMEM233B4DJY2 109 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 CDC7O00311 574 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 HOXC11O43248 304 aaPredicted RBP6.17□□□□□ -1.42
CHD9-217ENST00000565832 TRIM13O60858 407 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 SOCS5O75159 536 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 RHOBTB1O94844 696 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 SERPINE1P05121 402 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 JUNP05412 331 aaKnown RBP6.17□□□□□ -1.42
CHD9-217ENST00000565832 ATP5BP06576 529 aaKnown RBP6.17□□□□□ -1.42
CHD9-217ENST00000565832 POU2F2P09086 479 aa6.17□□□□□ -1.42
CHD9-217ENST00000565832 LTA4HP09960 611 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms