RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 RHDQ02161 417 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 PTPRRQ15256 657 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 P3H1Q32P28 736 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 SIRPB2Q5JXA9 342 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 PHF19Q5T6S3 580 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 DARS2Q6PI48 645 aaKnown RBP16.54■□□□□ 0.24
USB1-211ENST00000565662 WDR74Q6RFH5 385 aaPredicted RBP16.54■□□□□ 0.24
USB1-211ENST00000565662 RAD9BQ6WBX8 426 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 RFLNAQ6ZTI6 216 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 KDELC2Q7Z4H8 507 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 AGBL5Q8NDL9 886 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 GPR26Q8NDV2 337 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 IPMKQ8NFU5 416 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 SLC37A2Q8TED4 501 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 HEXDCQ8WVB3 486 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 PRR11Q96HE9 360 aaPredicted RBP16.54■□□□□ 0.24
USB1-211ENST00000565662 MRGPRX2Q96LB1 330 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 SPATA13Q96N96 652 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 TEFMQ96QE5 360 aaKnown RBP16.54■□□□□ 0.24
USB1-211ENST00000565662 HEMGNQ9BXL5 484 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 PRORYQ9H606 182 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 POT1Q9NUX5 634 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 ATXN10Q9UBB4 475 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 PCDHB11Q9Y5F2 797 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 DSPP15924 2871 aaKnown RBP16.54■□□□□ 0.24
USB1-211ENST00000565662 ZNF106Q9H2Y7 1883 aaKnown RBP16.53■□□□□ 0.24
USB1-211ENST00000565662 IGHV1OR21-1A0A087WYE8 117 aa16.53■□□□□ 0.24
USB1-211ENST00000565662 PSMD3O43242 534 aa16.53■□□□□ 0.24
USB1-211ENST00000565662 CDK14O94921 469 aa16.53■□□□□ 0.24
USB1-211ENST00000565662 ATP1A1P05023 1023 aaKnown RBP16.53■□□□□ 0.24
USB1-211ENST00000565662 LIPCP11150 499 aa16.53■□□□□ 0.24
USB1-211ENST00000565662 ACP5P13686 325 aa16.53■□□□□ 0.24
USB1-211ENST00000565662 RBL1P28749 1068 aa16.53■□□□□ 0.24
USB1-211ENST00000565662 CSTF2P33240 577 aaKnown RBP eCLIP16.53■□□□□ 0.24
USB1-211ENST00000565662 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.53■□□□□ 0.24
USB1-211ENST00000565662 ALS2CLQ60I27 953 aa16.53■□□□□ 0.24
USB1-211ENST00000565662 TMEM71Q6P5X7 295 aa16.53■□□□□ 0.24
USB1-211ENST00000565662 IYDQ6PHW0 289 aa16.53■□□□□ 0.24
USB1-211ENST00000565662 FOXR1Q6PIV2 292 aa16.53■□□□□ 0.24
USB1-211ENST00000565662 WASH2PQ6VEQ5 465 aa16.53■□□□□ 0.24
USB1-211ENST00000565662 TRIM48Q8IWZ4 208 aa16.53■□□□□ 0.24
USB1-211ENST00000565662 GDAP1Q8TB36 358 aa16.53■□□□□ 0.24
USB1-211ENST00000565662 SNRNP27Q8WVK2 155 aaKnown RBP16.53■□□□□ 0.24
USB1-211ENST00000565662 WBP1Q96G27 269 aa16.53■□□□□ 0.24
USB1-211ENST00000565662 OR2AG1Q9H205 316 aa16.53■□□□□ 0.24
USB1-211ENST00000565662 WASH6PQ9NQA3 447 aa16.53■□□□□ 0.24
USB1-211ENST00000565662 IL17CQ9P0M4 197 aa16.53■□□□□ 0.24
USB1-211ENST00000565662 ADGRG1Q9Y653 693 aa16.53■□□□□ 0.24
USB1-211ENST00000565662 OAS3Q9Y6K5 1087 aaKnown RBP16.53■□□□□ 0.24
USB1-211ENST00000565662 LAMA5O15230 3695 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 GLYATL1P3A0A0U1RQE8 302 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 GRID2IPA4D2P6 1211 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 STX7O15400 261 aaKnown RBP16.52■□□□□ 0.24
USB1-211ENST00000565662 KCNN4O15554 427 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 KLK10O43240 276 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 RALBP11234 206 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 LPOP22079 712 aaPredicted RBP16.52■□□□□ 0.24
USB1-211ENST00000565662 IDSP22304 550 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 HALP42357 657 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 PPM1FP49593 454 aaPredicted RBP16.52■□□□□ 0.24
USB1-211ENST00000565662 ADCY2Q08462 1091 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 TAF1AQ15573 450 aaPredicted RBP16.52■□□□□ 0.24
USB1-211ENST00000565662 AMZ1Q400G9 498 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 ANKRD20A2Q5SQ80 823 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 SEL1L2Q5TEA6 688 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 ANKRD20A1Q5TYW2 823 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 AGAP9Q5VTM2 703 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 ANKRD20A3Q5VUR7 823 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 B3GNT8Q7Z7M8 397 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 ADGRG6Q86SQ4 1221 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 JAMLQ86YT9 394 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 PLXDC1Q8IUK5 500 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 BEND7Q8N7W2 519 aaPredicted RBP16.52■□□□□ 0.24
USB1-211ENST00000565662 ACRBPQ8NEB7 543 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 DDHD1Q8NEL9 900 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 BLOC1S5Q8TDH9 187 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 ULK4Q96C45 1275 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 EID2BQ96D98 161 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 SMIM14Q96QK8 99 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 ZPBPQ9BS86 351 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 ASPSCR1Q9BZE9 553 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 FOXP3Q9BZS1 431 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 LACRTQ9GZZ8 138 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 OSGEPL1Q9H4B0 414 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 UBP1Q9NZI7 540 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 ATXN7L1Q9ULK2 861 aaPredicted RBP16.52■□□□□ 0.24
USB1-211ENST00000565662 SSUH2Q9Y2M2 353 aa16.52■□□□□ 0.24
USB1-211ENST00000565662 REXO2Q9Y3B8 237 aaKnown RBP16.52■□□□□ 0.24
USB1-211ENST00000565662 A0A0U1RQS6 177 aa16.51■□□□□ 0.23
USB1-211ENST00000565662 A6NCN8 305 aa16.51■□□□□ 0.23
USB1-211ENST00000565662 RCCD1A6NED2 376 aa16.51■□□□□ 0.23
USB1-211ENST00000565662 ERI2A8K979 691 aaKnown RBP16.51■□□□□ 0.23
USB1-211ENST00000565662 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.51■□□□□ 0.23
USB1-211ENST00000565662 ERVH48-1M5A8F1 160 aa16.51■□□□□ 0.23
USB1-211ENST00000565662 ARHGAP6O43182 974 aa16.51■□□□□ 0.23
USB1-211ENST00000565662 PIRTP0C851 137 aa16.51■□□□□ 0.23
USB1-211ENST00000565662 THRAP10827 490 aa16.51■□□□□ 0.23
USB1-211ENST00000565662 ZNF7P17097 686 aaPredicted RBP16.51■□□□□ 0.23
USB1-211ENST00000565662 ZNF8P17098 575 aaPredicted RBP16.51■□□□□ 0.23
USB1-211ENST00000565662 XRCC1P18887 633 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms