RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 MAPK9P45984 424 aa23.44■■□□□ 1.34
RAB40C-209ENST00000565511 SLC14A2Q15849 920 aa23.44■■□□□ 1.34
RAB40C-209ENST00000565511 KAZNQ674X7 775 aa23.44■■□□□ 1.34
RAB40C-209ENST00000565511 ANKS6Q68DC2 871 aa23.44■■□□□ 1.34
RAB40C-209ENST00000565511 SPOCD1Q6ZMY3 1216 aa23.44■■□□□ 1.34
RAB40C-209ENST00000565511 ARHGAP22Q7Z5H3 698 aa23.44■■□□□ 1.34
RAB40C-209ENST00000565511 ZNF547Q8IVP9 402 aa23.44■■□□□ 1.34
RAB40C-209ENST00000565511 TRAM1L1Q8N609 369 aa23.44■■□□□ 1.34
RAB40C-209ENST00000565511 OR10G6Q8NH81 332 aa23.44■■□□□ 1.34
RAB40C-209ENST00000565511 TEKT5Q96M29 485 aa23.44■■□□□ 1.34
RAB40C-209ENST00000565511 HERPUD2Q9BSE4 406 aa23.44■■□□□ 1.34
RAB40C-209ENST00000565511 GPR63Q9BZJ6 419 aa23.44■■□□□ 1.34
RAB40C-209ENST00000565511 BPIFA1Q9NP55 256 aa23.44■■□□□ 1.34
RAB40C-209ENST00000565511 KLC4Q9NSK0 619 aa23.44■■□□□ 1.34
RAB40C-209ENST00000565511 SLC39A1Q9NY26 324 aa23.44■■□□□ 1.34
RAB40C-209ENST00000565511 DDX56Q9NY93 547 aaKnown RBP23.44■■□□□ 1.34
RAB40C-209ENST00000565511 OGFRQ9NZT2 677 aa23.44■■□□□ 1.34
RAB40C-209ENST00000565511 CPNE7Q9UBL6 633 aa23.44■■□□□ 1.34
RAB40C-209ENST00000565511 SPTA1P02549 2419 aa23.44■■□□□ 1.34
RAB40C-209ENST00000565511 A0A0A6YYK5 440 aaPredicted RBP23.43■■□□□ 1.34
RAB40C-209ENST00000565511 STMND1H3BQB6 276 aa23.43■■□□□ 1.34
RAB40C-209ENST00000565511 CHUKO15111 745 aa23.43■■□□□ 1.34
RAB40C-209ENST00000565511 SPOPO43791 374 aa23.43■■□□□ 1.34
RAB40C-209ENST00000565511 CST8O60676 142 aa23.43■■□□□ 1.34
RAB40C-209ENST00000565511 TPM1P09493 284 aa23.43■■□□□ 1.34
RAB40C-209ENST00000565511 NFKB1P19838 968 aa23.43■■□□□ 1.34
RAB40C-209ENST00000565511 UGT1A3P35503 534 aa23.43■■□□□ 1.34
RAB40C-209ENST00000565511 SLC1A1P43005 524 aa23.43■■□□□ 1.34
RAB40C-209ENST00000565511 CHRNA4P43681 627 aa23.43■■□□□ 1.34
RAB40C-209ENST00000565511 TMEM164Q5U3C3 297 aa23.43■■□□□ 1.34
RAB40C-209ENST00000565511 NCSTNQ92542 709 aa23.43■■□□□ 1.34
RAB40C-209ENST00000565511 HAUS1Q96CS2 278 aa23.43■■□□□ 1.34
RAB40C-209ENST00000565511 AHCYL2Q96HN2 611 aaKnown RBP23.43■■□□□ 1.34
RAB40C-209ENST00000565511 PLEKHG4BQ96PX9 1271 aa23.43■■□□□ 1.34
RAB40C-209ENST00000565511 CTRCQ99895 268 aa23.43■■□□□ 1.34
RAB40C-209ENST00000565511 DPYSL5Q9BPU6 564 aa23.43■■□□□ 1.34
RAB40C-209ENST00000565511 ZSCAN5AQ9BUG6 496 aa23.43■■□□□ 1.34
RAB40C-209ENST00000565511 DDA1Q9BW61 102 aa23.43■■□□□ 1.34
RAB40C-209ENST00000565511 OSGEPL1Q9H4B0 414 aa23.43■■□□□ 1.34
RAB40C-209ENST00000565511 TRIM39Q9HCM9 518 aa23.43■■□□□ 1.34
RAB40C-209ENST00000565511 APMAPQ9HDC9 416 aa23.43■■□□□ 1.34
RAB40C-209ENST00000565511 INTUQ9ULD6 942 aa23.43■■□□□ 1.34
RAB40C-209ENST00000565511 B4E171 279 aa23.42■■□□□ 1.34
RAB40C-209ENST00000565511 B8ZZF3 427 aa23.42■■□□□ 1.34
RAB40C-209ENST00000565511 AKR1B15C9JRZ8 316 aaPredicted RBP23.42■■□□□ 1.34
RAB40C-209ENST00000565511 GPR39O43194 453 aa23.42■■□□□ 1.34
RAB40C-209ENST00000565511 FAM87AP0C7U9 286 aa23.42■■□□□ 1.34
RAB40C-209ENST00000565511 TSPAN7P41732 249 aa23.42■■□□□ 1.34
RAB40C-209ENST00000565511 PPM1FP49593 454 aaPredicted RBP23.42■■□□□ 1.34
RAB40C-209ENST00000565511 TBR1Q16650 682 aa23.42■■□□□ 1.34
RAB40C-209ENST00000565511 WDR74Q6RFH5 385 aaPredicted RBP23.42■■□□□ 1.34
RAB40C-209ENST00000565511 TTC30BQ8N4P2 665 aa23.42■■□□□ 1.34
RAB40C-209ENST00000565511 TC2NQ8N9U0 490 aa23.42■■□□□ 1.34
RAB40C-209ENST00000565511 RNF31Q96EP0 1072 aa23.42■■□□□ 1.34
RAB40C-209ENST00000565511 OXNAD1Q96HP4 312 aaPredicted RBP23.42■■□□□ 1.34
RAB40C-209ENST00000565511 KLHL3Q9UH77 587 aa23.42■■□□□ 1.34
RAB40C-209ENST00000565511 PCDHB11Q9Y5F2 797 aa23.42■■□□□ 1.34
RAB40C-209ENST00000565511 ALG6Q9Y672 507 aa23.42■■□□□ 1.34
RAB40C-209ENST00000565511 ASH1LQ9NR48 2969 aaKnown RBP23.41■■□□□ 1.34
RAB40C-209ENST00000565511 LIFP15018 202 aa23.41■■□□□ 1.34
RAB40C-209ENST00000565511 CLCNKAP51800 687 aa23.41■■□□□ 1.34
RAB40C-209ENST00000565511 GFERP55789 205 aa23.41■■□□□ 1.34
RAB40C-209ENST00000565511 WNT3AP56704 352 aa23.41■■□□□ 1.34
RAB40C-209ENST00000565511 SKOR2Q2VWA4 1001 aaPredicted RBP23.41■■□□□ 1.34
RAB40C-209ENST00000565511 SLC9B2Q86UD5 537 aa23.41■■□□□ 1.34
RAB40C-209ENST00000565511 PHYKPLQ8IUZ5 450 aa23.41■■□□□ 1.34
RAB40C-209ENST00000565511 CNGA4Q8IV77 575 aa23.41■■□□□ 1.34
RAB40C-209ENST00000565511 TFB1MQ8WVM0 346 aaKnown RBP23.41■■□□□ 1.34
RAB40C-209ENST00000565511 RTP4Q96DX8 246 aa23.41■■□□□ 1.34
RAB40C-209ENST00000565511 SLC12A9Q9BXP2 914 aa23.41■■□□□ 1.34
RAB40C-209ENST00000565511 SPRY4Q9C004 299 aa23.41■■□□□ 1.34
RAB40C-209ENST00000565511 C10orf88Q9H8K7 445 aa23.41■■□□□ 1.34
RAB40C-209ENST00000565511 ZNF624Q9P2J8 865 aaPredicted RBP23.41■■□□□ 1.34
RAB40C-209ENST00000565511 DNAJC16Q9Y2G8 782 aa23.41■■□□□ 1.34
RAB40C-209ENST00000565511 SLC30A1Q9Y6M5 507 aa23.41■■□□□ 1.34
RAB40C-209ENST00000565511 MYO18BQ8IUG5 2567 aa23.41■■□□□ 1.34
RAB40C-209ENST00000565511 hCG_1818297A0A087WSY0 165 aa23.4■■□□□ 1.34
RAB40C-209ENST00000565511 KIR2DS5A0A0G2JLQ3 304 aa23.4■■□□□ 1.34
RAB40C-209ENST00000565511 A0A0G2JNG1 304 aa23.4■■□□□ 1.34
RAB40C-209ENST00000565511 KIR2DS3K7RE56 304 aa23.4■■□□□ 1.34
RAB40C-209ENST00000565511 PSTPIP1O43586 416 aa23.4■■□□□ 1.34
RAB40C-209ENST00000565511 BRAFP15056 766 aa23.4■■□□□ 1.34
RAB40C-209ENST00000565511 ZNF7P17097 686 aaPredicted RBP23.4■■□□□ 1.34
RAB40C-209ENST00000565511 ITGB6P18564 788 aa23.4■■□□□ 1.34
RAB40C-209ENST00000565511 SLC19A1P41440 591 aa23.4■■□□□ 1.34
RAB40C-209ENST00000565511 EPHA4P54764 986 aa23.4■■□□□ 1.34
RAB40C-209ENST00000565511 HADHBP55084 474 aaKnown RBP23.4■■□□□ 1.34
RAB40C-209ENST00000565511 NFKB2Q00653 900 aa23.4■■□□□ 1.34
RAB40C-209ENST00000565511 KIR2DS5Q14953 304 aa23.4■■□□□ 1.34
RAB40C-209ENST00000565511 CLCA4Q14CN2 919 aa23.4■■□□□ 1.34
RAB40C-209ENST00000565511 SEPT7Q16181 437 aaKnown RBP23.4■■□□□ 1.34
RAB40C-209ENST00000565511 ATP13A5Q4VNC0 1218 aa23.4■■□□□ 1.34
RAB40C-209ENST00000565511 SIRPB2Q5JXA9 342 aa23.4■■□□□ 1.34
RAB40C-209ENST00000565511 C11orf96Q7Z7L8 435 aa23.4■■□□□ 1.34
RAB40C-209ENST00000565511 ZC3H18Q86VM9 953 aaKnown RBP23.4■■□□□ 1.34
RAB40C-209ENST00000565511 ZNF567Q8N184 647 aa23.4■■□□□ 1.34
RAB40C-209ENST00000565511 KRT35Q92764 455 aa23.4■■□□□ 1.34
RAB40C-209ENST00000565511 MRGPRX2Q96LB1 330 aa23.4■■□□□ 1.34
RAB40C-209ENST00000565511 MN1Q10571 1320 aaPredicted RBP23.39■■□□□ 1.34
RAB40C-209ENST00000565511 LOC285095A0A1B0GVY8 99 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms