RNA–Protein interactions for RNA: ENST00000565481.5

KIFC3-222, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-222	ENST00000565481	FGF3	P11487	239 aa	Predicted RBP	11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	CCL4	P13236	92 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	ACP5	P13686	325 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	SLC2A4	P14672	509 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	NFKB1	P19838	968 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	CYLC1	P35663	651 aa	Predicted RBP	11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	HMGCL	P35914	325 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	EPHA4	P54764	986 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	WNT3A	P56704	352 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	UBE2I	P63279	158 aa	Known RBP	11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	HHEX	Q03014	270 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	KIR2DS5	Q14953	304 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	LLGL1	Q15334	1064 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	SPA17	Q15506	151 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	TGIF1	Q15583	401 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	ALS2CL	Q60I27	953 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	KAZN	Q674X7	775 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	ARHGAP22	Q7Z5H3	698 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	ZFAND4	Q86XD8	727 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	PHYKPL	Q8IUZ5	450 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	ZNF843	Q8N446	348 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	TTC30B	Q8N4P2	665 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	AVL9	Q8NBF6	648 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	AGBL5	Q8NDL9	886 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	KRT35	Q92764	455 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	P3H4	Q92791	437 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	OXNAD1	Q96HP4	312 aa	Predicted RBP	11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	RBM41	Q96IZ5	413 aa	Known RBP	11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	CALR3	Q96L12	384 aa	Known RBP	11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	MRGPRX2	Q96LB1	330 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	VPS35	Q96QK1	796 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	SLC38A3	Q99624	504 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	TRABD	Q9H4I3	376 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	UCK1	Q9HA47	277 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	ARFGAP3	Q9NP61	516 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	UBP1	Q9NZI7	540 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	TMEM9	Q9P0T7	183 aa		11.5	□□□□□ -0.57
KIFC3-222	ENST00000565481	TRBV23OR9-2	A0A075B6M9	112 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	RCCD1	A6NED2	376 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	LILRA5	A6NI73	299 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	BTNL10	A8MVZ5	291 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481		B4E171	279 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	APOC4-APOC2	K7ER74	178 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	DUX1	O43812	170 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	VEGFD	O43915	354 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	NDUFA10	O95299	355 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	APOC2	P02655	101 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	CTNNA1	P35221	906 aa	Known RBP	11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	PTPN7	P35236	360 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	TSPAN7	P41732	249 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	ZNF75D	P51815	510 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	MAPK10	P53779	464 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	COPS2	P61201	443 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	C19orf57	Q0VDD7	668 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	XRCC4	Q13426	336 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	KHDC1	Q4VXA5	237 aa	Known RBP	11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	SIRPB2	Q5JXA9	342 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	ZNF648	Q5T619	568 aa	Predicted RBP	11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	TMEM164	Q5U3C3	297 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	CCDC70	Q6NSX1	233 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	DAAM2	Q86T65	1068 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	SLC9B2	Q86UD5	537 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	ZC3H18	Q86VM9	953 aa	Known RBP	11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	ZNF761	Q86XN6	746 aa	Predicted RBP	11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	ZNF547	Q8IVP9	402 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	BMPER	Q8N8U9	685 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	OR10G6	Q8NH81	332 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	HTR3C	Q8WXA8	447 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	PMEPA1	Q969W9	287 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	SH3KBP1	Q96B97	665 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	TAAR9	Q96RI9	348 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	TIMM29	Q9BSF4	260 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	DDA1	Q9BW61	102 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	EPB41L1	Q9H4G0	881 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	LUC7L	Q9NQ29	371 aa	Known RBP	11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	ASH1L	Q9NR48	2969 aa	Known RBP	11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	HACD3	Q9P035	362 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	IL17C	Q9P0M4	197 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	KLHL8	Q9P2G9	620 aa	Predicted RBP	11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	CPNE7	Q9UBL6	633 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	SLC23A2	Q9UGH3	650 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	TRHDE	Q9UKU6	1024 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	EFR3B	Q9Y2G0	817 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	PCDHA3	Q9Y5H8	950 aa		11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	EPN1	Q9Y6I3	576 aa	Predicted RBP	11.49	□□□□□ -0.57
KIFC3-222	ENST00000565481	SOWAHD	A6NJG2	315 aa		11.48	□□□□□ -0.57
KIFC3-222	ENST00000565481	AGRP	O00253	132 aa		11.48	□□□□□ -0.57
KIFC3-222	ENST00000565481	KMO	O15229	486 aa		11.48	□□□□□ -0.57
KIFC3-222	ENST00000565481	SLC4A1	P02730	911 aa		11.48	□□□□□ -0.57
KIFC3-222	ENST00000565481	ZNF7	P17097	686 aa	Predicted RBP	11.48	□□□□□ -0.57
KIFC3-222	ENST00000565481	XRCC1	P18887	633 aa	Predicted RBP	11.48	□□□□□ -0.57
KIFC3-222	ENST00000565481	HLA-DPA1	P20036	260 aa		11.48	□□□□□ -0.57
KIFC3-222	ENST00000565481	CSTF2	P33240	577 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
KIFC3-222	ENST00000565481	CHRNA4	P43681	627 aa		11.48	□□□□□ -0.57
KIFC3-222	ENST00000565481	SRSF6	Q13247	344 aa	Known RBP	11.48	□□□□□ -0.57
KIFC3-222	ENST00000565481	MPP3	Q13368	585 aa		11.48	□□□□□ -0.57
KIFC3-222	ENST00000565481	NFATC2	Q13469	925 aa		11.48	□□□□□ -0.57
KIFC3-222	ENST00000565481	NOMO1	Q15155	1222 aa		11.48	□□□□□ -0.57
KIFC3-222	ENST00000565481	SLC1A5	Q15758	541 aa		11.48	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms