RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 NR2F1P10589 423 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 SRCP12931 536 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 ZNF12P17014 697 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 APOBEC1P41238 236 aaKnown RBP4.4□□□□□ -1.71
CHD9-215ENST00000565442 MMP14P50281 582 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 STAT2P52630 851 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 PNLIPRP2P54317 469 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 TMF1P82094 1093 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 PPP2R2BQ00005 443 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 SPOCK1Q08629 439 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 GAGE1Q13065 139 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 GAGE4Q13068 117 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 OASLQ15646 514 aaKnown RBP4.4□□□□□ -1.71
CHD9-215ENST00000565442 DECR1Q16698 335 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 ZNF585BQ52M93 769 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 GPR139Q6DWJ6 353 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 APPL2Q8NEU8 664 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 DUSP19Q8WTR2 217 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 PRPF31Q8WWY3 499 aaKnown RBP4.4□□□□□ -1.71
CHD9-215ENST00000565442 NEUROG1Q92886 237 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 TAAR8Q969N4 342 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 CEP295NLQ96MC4 621 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 OR1F2PQ96R84 312 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 SERINC2Q96SA4 455 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 MTERF1Q99551 399 aaKnown RBP4.4□□□□□ -1.71
CHD9-215ENST00000565442 KIFC3Q9BVG8 833 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 KLHL4Q9C0H6 718 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 SIL1Q9H173 461 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 OSGEPL1Q9H4B0 414 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 MAGIXQ9H6Y5 334 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.4□□□□□ -1.71
CHD9-215ENST00000565442 DBNLQ9UJU6 430 aaKnown RBP4.4□□□□□ -1.71
CHD9-215ENST00000565442 PASKQ96RG2 1323 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 SYNDIG1LA6NDD5 238 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 FAM90A26D6RGX4 464 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 ANKRD28O15084 1053 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 PLOD3O60568 738 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 RFPL2O75678 378 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 RSL1D1O76021 490 aaKnown RBP4.39□□□□□ -1.71
CHD9-215ENST00000565442 DNTTP04053 509 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 TRIM21P19474 475 aaKnown RBP4.39□□□□□ -1.71
CHD9-215ENST00000565442 FASLGP48023 281 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 PDLIM4P50479 330 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 BRWD1-AS2P59051 145 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 CALD1Q05682 793 aaKnown RBP4.39□□□□□ -1.71
CHD9-215ENST00000565442 ZNF155Q12901 538 aaPredicted RBP4.39□□□□□ -1.71
CHD9-215ENST00000565442 NFATC4Q14934 902 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 CALCRLQ16602 461 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 C18orf63Q68DL7 685 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 PAPD4Q6PIY7 484 aaKnown RBP4.39□□□□□ -1.71
CHD9-215ENST00000565442 GSG1LQ6UXU4 331 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 CCNI2Q6ZMN8 369 aaPredicted RBP4.39□□□□□ -1.71
CHD9-215ENST00000565442 GPR180Q86V85 440 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 DNAAF5Q86Y56 855 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 EPHX4Q8IUS5 362 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 ZNF114Q8NC26 417 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 ELP5Q8TE02 316 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 TANKQ92844 425 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 PHF21BQ96EK2 531 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 GCNAQ96QF7 691 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 FIZ1Q96SL8 496 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 DDOQ99489 341 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 SEMA3CQ99985 751 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 APOL6Q9BWW8 343 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 CPSF2Q9P2I0 782 aaKnown RBP4.39□□□□□ -1.71
CHD9-215ENST00000565442 FBXL2Q9UKC9 423 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 KCNS2Q9ULS6 477 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 B3GALT5Q9Y2C3 310 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 NFS1Q9Y697 457 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 FAM169AQ9Y6X4 670 aa4.39□□□□□ -1.71
CHD9-215ENST00000565442 IGLV5-37A0A075B6J1 123 aa4.38□□□□□ -1.71
CHD9-215ENST00000565442 LNP1A1A4G5 178 aa4.38□□□□□ -1.71
CHD9-215ENST00000565442 CLEC18AA5D8T8 446 aa4.38□□□□□ -1.71
CHD9-215ENST00000565442 GOLGA6L9A6NEM1 432 aa4.38□□□□□ -1.71
CHD9-215ENST00000565442 KCNN4O15554 427 aa4.38□□□□□ -1.71
CHD9-215ENST00000565442 AVILO75366 819 aa4.38□□□□□ -1.71
CHD9-215ENST00000565442 GAS8-AS1O95177 125 aa4.38□□□□□ -1.71
CHD9-215ENST00000565442 GH2P01242 217 aa4.38□□□□□ -1.71
CHD9-215ENST00000565442 AFPP02771 609 aaKnown RBP4.38□□□□□ -1.71
CHD9-215ENST00000565442 IL11P20809 199 aa4.38□□□□□ -1.71
CHD9-215ENST00000565442 UGT1A1P22309 533 aa4.38□□□□□ -1.71
CHD9-215ENST00000565442 CORO1AP31146 461 aaKnown RBP4.38□□□□□ -1.71
CHD9-215ENST00000565442 PEX5P50542 639 aa4.38□□□□□ -1.71
CHD9-215ENST00000565442 CLDN20P56880 219 aa4.38□□□□□ -1.71
CHD9-215ENST00000565442 PDE1BQ01064 536 aa4.38□□□□□ -1.71
CHD9-215ENST00000565442 EGR4Q05215 589 aa4.38□□□□□ -1.71
CHD9-215ENST00000565442 MYLK3Q32MK0 819 aa4.38□□□□□ -1.71
CHD9-215ENST00000565442 GARNL3Q5VVW2 1013 aa4.38□□□□□ -1.71
CHD9-215ENST00000565442 LCN10Q6JVE6 187 aa4.38□□□□□ -1.71
CHD9-215ENST00000565442 BRAT1Q6PJG6 821 aa4.38□□□□□ -1.71
CHD9-215ENST00000565442 PRPF39Q86UA1 669 aaKnown RBP4.38□□□□□ -1.71
CHD9-215ENST00000565442 IQCF1Q8N6M8 205 aa4.38□□□□□ -1.71
CHD9-215ENST00000565442 CLEC18CQ8NCF0 446 aa4.38□□□□□ -1.71
CHD9-215ENST00000565442 OR5R1Q8NH85 324 aa4.38□□□□□ -1.71
CHD9-215ENST00000565442 SNRNP27Q8WVK2 155 aaKnown RBP4.38□□□□□ -1.71
CHD9-215ENST00000565442 SLC44A1Q8WWI5 657 aa4.38□□□□□ -1.71
CHD9-215ENST00000565442 ZNF479Q96JC4 524 aa4.38□□□□□ -1.71
CHD9-215ENST00000565442 TMEM204Q9BSN7 226 aa4.38□□□□□ -1.71
CHD9-215ENST00000565442 TMEM39BQ9GZU3 492 aa4.38□□□□□ -1.71
CHD9-215ENST00000565442 IL25Q9H293 177 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms