RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 EIF3HO15372 352 aaKnown RBP eCLIP12.34□□□□□ -0.43
KARS-204ENST00000564578 DNAJC6O75061 913 aa12.34□□□□□ -0.43
KARS-204ENST00000564578 ITGALP20701 1170 aa12.34□□□□□ -0.43
KARS-204ENST00000564578 CUL1Q13616 776 aa12.34□□□□□ -0.43
KARS-204ENST00000564578 HLTFQ14527 1009 aaKnown RBP eCLIP12.34□□□□□ -0.43
KARS-204ENST00000564578 ZNF423Q2M1K9 1284 aa12.34□□□□□ -0.43
KARS-204ENST00000564578 STEAP4Q687X5 459 aa12.34□□□□□ -0.43
KARS-204ENST00000564578 DOK6Q6PKX4 331 aa12.34□□□□□ -0.43
KARS-204ENST00000564578 AFTPHQ6ULP2 937 aa12.34□□□□□ -0.43
KARS-204ENST00000564578 SERPINA9Q86WD7 417 aa12.34□□□□□ -0.43
KARS-204ENST00000564578 PHYKPLQ8IUZ5 450 aa12.34□□□□□ -0.43
KARS-204ENST00000564578 CCNJLQ8IV13 435 aa12.34□□□□□ -0.43
KARS-204ENST00000564578 FOXP3Q9BZS1 431 aa12.34□□□□□ -0.43
KARS-204ENST00000564578 GAREM1Q9H706 876 aa12.34□□□□□ -0.43
KARS-204ENST00000564578 SAYSD1Q9NPB0 183 aa12.34□□□□□ -0.43
KARS-204ENST00000564578 VPS18Q9P253 973 aa12.34□□□□□ -0.43
KARS-204ENST00000564578 NFU1Q9UMS0 254 aa12.34□□□□□ -0.43
KARS-204ENST00000564578 DGKBQ9Y6T7 804 aa12.34□□□□□ -0.43
KARS-204ENST00000564578 CEP250Q9BV73 2442 aa12.34□□□□□ -0.43
KARS-204ENST00000564578 TMEM131Q92545 1883 aa12.34□□□□□ -0.43
KARS-204ENST00000564578 PRSS38A1L453 326 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 GDF9O60383 454 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 TTC4O95801 387 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 SYPP08247 313 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 MYBL2P10244 700 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 NME1P15531 152 aaKnown RBP12.33□□□□□ -0.44
KARS-204ENST00000564578 ZNF8P17098 575 aaPredicted RBP12.33□□□□□ -0.44
KARS-204ENST00000564578 KELP23276 732 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 ACRV1P26436 265 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 RXRGP48443 463 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 HK3P52790 923 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 SRP54P61011 504 aaKnown RBP12.33□□□□□ -0.44
KARS-204ENST00000564578 TMEM115Q12893 351 aaPredicted RBP12.33□□□□□ -0.44
KARS-204ENST00000564578 DBN1Q16643 649 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 TRMT10BQ6PF06 316 aaKnown RBP12.33□□□□□ -0.44
KARS-204ENST00000564578 PRR23CQ6ZRP0 262 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 LDB1Q86U70 411 aaPredicted RBP12.33□□□□□ -0.44
KARS-204ENST00000564578 CCDC25Q86WR0 208 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 RBFAQ8N0V3 343 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 MINDY1Q8N5J2 469 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.33□□□□□ -0.44
KARS-204ENST00000564578 FMO2Q99518 471 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 BOCQ9BWV1 1114 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 GTPBP2Q9BX10 602 aaKnown RBP12.33□□□□□ -0.44
KARS-204ENST00000564578 OR2AG1Q9H205 316 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 DNAJC28Q9NX36 388 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 KLQ9UEF7 1012 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.33□□□□□ -0.44
KARS-204ENST00000564578 CRLS1Q9UJA2 301 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 SUFUQ9UMX1 484 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 ST14Q9Y5Y6 855 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.33□□□□□ -0.44
KARS-204ENST00000564578 V9GYY5 206 aaPredicted RBP12.33□□□□□ -0.44
KARS-204ENST00000564578 ARID1BQ8NFD5 2236 aaPredicted RBP12.33□□□□□ -0.44
KARS-204ENST00000564578 DCHS1Q96JQ0 3298 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 A0A1B0GTQ1 180 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 CHUKO15111 745 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 SCAMP1O15126 338 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 CD3EAPO15446 510 aaKnown RBP12.33□□□□□ -0.44
KARS-204ENST00000564578 SGTAO43765 313 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 PAMP19021 973 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 GPX6P59796 221 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 PPARDQ03181 441 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 BNIP3Q12983 259 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 LONRF1Q17RB8 773 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 LDLRAP1Q5SW96 308 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 NEPROQ6NW34 567 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 IL27RAQ6UWB1 636 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 MARK2Q7KZI7 788 aaKnown RBP12.33□□□□□ -0.44
KARS-204ENST00000564578 TAS2R42Q7RTR8 314 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 ZNF547Q8IVP9 402 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 RASGEF1AQ8N9B8 481 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 GDAP1Q8TB36 358 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 PYROXD1Q8WU10 500 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 C9orf72Q96LT7 481 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 LRRC4CQ9HCJ2 640 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 CYP4F12Q9HCS2 524 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 CATSPERZQ9NTU4 200 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 MOCS1Q9NZB8 636 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 PRKAB1Q9Y478 270 aa12.33□□□□□ -0.44
KARS-204ENST00000564578 ASCC3Q8N3C0 2202 aaKnown RBP12.32□□□□□ -0.44
KARS-204ENST00000564578 TDRD6O60522 2096 aaKnown RBP12.32□□□□□ -0.44
KARS-204ENST00000564578 VEGFDO43915 354 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 NUAK1O60285 661 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 OR1I1O60431 355 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 GFRA3O60609 400 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 CDK14O94921 469 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 ASMTLO95671 621 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 IVLP07476 585 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 FAM153BP0C7A2 387 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 ERVK-10P10266 1014 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 JUNDP17535 347 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 SSTR1P30872 391 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 MAGEA4P43358 317 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 CTSCP53634 463 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 TUBB4BP68371 445 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 ERCC6LQ2NKX8 1250 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 FAM153CQ494X1 144 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 PYCR3Q53H96 274 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 HSP90AA5PQ58FG0 334 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms