RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 SNX15Q9NRS6 342 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 WSB2Q9NYS7 404 aaPredicted RBP12.7□□□□□ -0.38
CLK3-214ENST00000564096 SLC39A10Q9ULF5 831 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 NOVA2Q9UNW9 492 aaKnown RBP12.7□□□□□ -0.38
CLK3-214ENST00000564096 CRYL1Q9Y2S2 319 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 IGLV3-16A0A075B6K0 115 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 GPR89AB7ZAQ6 455 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 K7ESF4 209 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 CACNB4O00305 520 aaPredicted RBP12.69□□□□□ -0.38
CLK3-214ENST00000564096 TOR1BO14657 336 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 FPGTO14772 594 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 INPP4BO15327 924 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 LATO43561 262 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 RHOBTB1O94844 696 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 FSBPO95073 299 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 SYF2O95926 243 aaKnown RBP12.69□□□□□ -0.38
CLK3-214ENST00000564096 MPOP05164 745 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 GPR89BP0CG08 455 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 SAT1P21673 171 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 GABRB3P28472 473 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 FMO4P31512 558 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 KPNA2P52292 529 aaKnown RBP12.69□□□□□ -0.38
CLK3-214ENST00000564096 RAB10P61026 200 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 MAGOHP61326 146 aaKnown RBP12.69□□□□□ -0.38
CLK3-214ENST00000564096 CDK3Q00526 305 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 PDAP1Q13442 181 aaKnown RBP12.69□□□□□ -0.38
CLK3-214ENST00000564096 WSCD2Q2TBF2 565 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 TTMPQ5BVD1 217 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 KCTD16Q68DU8 428 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 PNCKQ6P2M8 343 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 MACC1Q6ZN28 852 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 HEATR4Q86WZ0 1026 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 MZB1Q8WU39 189 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 ZBTB9Q96C00 473 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 TLCD1Q96CP7 247 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 HIC2Q96JB3 615 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 ZNF514Q96K75 400 aaPredicted RBP12.69□□□□□ -0.38
CLK3-214ENST00000564096 LENG8Q96PV6 779 aaPredicted RBP12.69□□□□□ -0.38
CLK3-214ENST00000564096 NDNQ99608 321 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 AARSD1Q9BTE6 412 aaKnown RBP12.69□□□□□ -0.38
CLK3-214ENST00000564096 GPR174Q9BXC1 333 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 FAM126AQ9BYI3 521 aaPredicted RBP12.69□□□□□ -0.38
CLK3-214ENST00000564096 SSU72Q9NP77 194 aaKnown RBP12.69□□□□□ -0.38
CLK3-214ENST00000564096 PCMTD2Q9NV79 361 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 TAS2R13Q9NYV9 303 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 TLK1Q9UKI8 766 aa12.69□□□□□ -0.38
CLK3-214ENST00000564096 SMG5Q9UPR3 1016 aaKnown RBP12.69□□□□□ -0.38
CLK3-214ENST00000564096 A0A087X1B8 175 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 MEI4A8MW99 385 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 SLC31A1O15431 190 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 VEGFDO43915 354 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 OR1I1O60431 355 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 MAGEC1O60732 1142 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 PAK4O96013 591 aaPredicted RBP12.68□□□□□ -0.38
CLK3-214ENST00000564096 SOD1P00441 154 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 FTH1P02794 183 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 ALDOAP04075 364 aaKnown RBP12.68□□□□□ -0.38
CLK3-214ENST00000564096 F7P08709 466 aaPredicted RBP12.68□□□□□ -0.38
CLK3-214ENST00000564096 MYCLP1P12525 358 aaPredicted RBP12.68□□□□□ -0.38
CLK3-214ENST00000564096 ATP1B2P14415 290 aaPredicted RBP12.68□□□□□ -0.38
CLK3-214ENST00000564096 KRT4P19013 534 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 CD9P21926 228 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 FDXRP22570 491 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 KELP23276 732 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 CCNFP41002 786 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 MAGEA12P43365 314 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 PXNP49023 591 aaPredicted RBP12.68□□□□□ -0.38
CLK3-214ENST00000564096 ZKSCAN8Q15776 578 aaPredicted RBP12.68□□□□□ -0.38
CLK3-214ENST00000564096 TTLL9Q3SXZ7 439 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 ZNF789Q5FWF6 425 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 TNFAIP8L3Q5GJ75 292 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 RBM20Q5T481 1227 aaKnown RBP12.68□□□□□ -0.38
CLK3-214ENST00000564096 TBC1D1Q86TI0 1168 aaPredicted RBP12.68□□□□□ -0.38
CLK3-214ENST00000564096 LCA5Q86VQ0 697 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 SLC41A1Q8IVJ1 513 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 CYP4X1Q8N118 509 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 ARFGAP2Q8N6H7 521 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 CADM4Q8NFZ8 388 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 FAM174AQ8TBP5 190 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 SNX19Q92543 992 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 FOXJ1Q92949 421 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 ARL8AQ96BM9 186 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 APOPT1Q96IL0 206 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 P2RY12Q9H244 342 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 C6orf106Q9H6K1 298 aaPredicted RBP12.68□□□□□ -0.38
CLK3-214ENST00000564096 MKS1Q9NXB0 559 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 TRMT6Q9UJA5 497 aaKnown RBP12.68□□□□□ -0.38
CLK3-214ENST00000564096 ANKRD6Q9Y2G4 727 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 MTO1Q9Y2Z2 717 aaKnown RBP12.68□□□□□ -0.38
CLK3-214ENST00000564096 VWA7Q9Y334 891 aa12.68□□□□□ -0.38
CLK3-214ENST00000564096 A0A096LPK6 155 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 A6NNZ2 444 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 PRAMEF26H0Y7S4 382 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 K7ESM1 405 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 COPEO14579 308 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 MAP3K13O43283 966 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 PI15O43692 258 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 GLRA3O75311 464 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 GSTM1P09488 218 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 BRAFP15056 766 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms